RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 TRDNQ13061 729 aa11.57□□□□□ -0.56
CALD1-223ENST00000496024 IKQ13123 557 aaPredicted RBP11.57□□□□□ -0.56
CALD1-223ENST00000496024 PKN2Q16513 984 aaKnown RBP11.57□□□□□ -0.56
CALD1-223ENST00000496024 WDR78Q5VTH9 848 aa11.57□□□□□ -0.56
CALD1-223ENST00000496024 FBXO46Q6PJ61 603 aaPredicted RBP11.57□□□□□ -0.56
CALD1-223ENST00000496024 STOX1Q6ZVD7 989 aa11.57□□□□□ -0.56
CALD1-223ENST00000496024 RASGRP2Q7LDG7 609 aa11.57□□□□□ -0.56
CALD1-223ENST00000496024 RALYLQ86SE5 291 aaKnown RBP11.57□□□□□ -0.56
CALD1-223ENST00000496024 IQCA1Q86XH1 822 aa11.57□□□□□ -0.56
CALD1-223ENST00000496024 GMCL1P1Q8NEA9 526 aa11.57□□□□□ -0.56
CALD1-223ENST00000496024 GTF3C2Q8WUA4 911 aaPredicted RBP11.57□□□□□ -0.56
CALD1-223ENST00000496024 ABHD8Q96I13 439 aa11.57□□□□□ -0.56
CALD1-223ENST00000496024 TMEM47Q9BQJ4 181 aa11.57□□□□□ -0.56
CALD1-223ENST00000496024 CNNM2Q9H8M5 875 aa11.57□□□□□ -0.56
CALD1-223ENST00000496024 TCP11L1Q9NUJ3 509 aa11.57□□□□□ -0.56
CALD1-223ENST00000496024 GABRQQ9UN88 632 aa11.57□□□□□ -0.56
CALD1-223ENST00000496024 PTPN22Q9Y2R2 807 aa11.57□□□□□ -0.56
CALD1-223ENST00000496024 RABGAP1Q9Y3P9 1069 aa11.57□□□□□ -0.56
CALD1-223ENST00000496024 PTCH2Q9Y6C5 1203 aa11.57□□□□□ -0.56
CALD1-223ENST00000496024 COL11A1P12107 1806 aaPredicted RBP11.56□□□□□ -0.56
CALD1-223ENST00000496024 PARP14Q460N5 1801 aa11.56□□□□□ -0.56
CALD1-223ENST00000496024 TMEM232C9JQI7 657 aa11.56□□□□□ -0.56
CALD1-223ENST00000496024 SLC27A2O14975 620 aa11.56□□□□□ -0.56
CALD1-223ENST00000496024 TOP1P11387 765 aaKnown RBP11.56□□□□□ -0.56
CALD1-223ENST00000496024 BMP3P12645 472 aa11.56□□□□□ -0.56
CALD1-223ENST00000496024 HOXD10P28358 340 aa11.56□□□□□ -0.56
CALD1-223ENST00000496024 SLC4A3P48751 1232 aa11.56□□□□□ -0.56
CALD1-223ENST00000496024 CCDC96Q2M329 555 aa11.56□□□□□ -0.56
CALD1-223ENST00000496024 CREB3L3Q68CJ9 461 aa11.56□□□□□ -0.56
CALD1-223ENST00000496024 KCTD1Q719H9 257 aa11.56□□□□□ -0.56
CALD1-223ENST00000496024 CYB5R4Q7L1T6 521 aa11.56□□□□□ -0.56
CALD1-223ENST00000496024 CHST3Q7LGC8 479 aa11.56□□□□□ -0.56
CALD1-223ENST00000496024 RAET1EQ8TD07 263 aa11.56□□□□□ -0.56
CALD1-223ENST00000496024 KIFC2Q96AC6 838 aa11.56□□□□□ -0.56
CALD1-223ENST00000496024 COA7Q96BR5 231 aa11.56□□□□□ -0.56
CALD1-223ENST00000496024 ZSCAN10Q96SZ4 725 aaPredicted RBP11.56□□□□□ -0.56
CALD1-223ENST00000496024 SLF1Q9BQI6 1058 aa11.56□□□□□ -0.56
CALD1-223ENST00000496024 UBAC1Q9BSL1 405 aa11.56□□□□□ -0.56
CALD1-223ENST00000496024 PORCNQ9H237 461 aa11.56□□□□□ -0.56
CALD1-223ENST00000496024 SRRDQ9UH36 339 aa11.56□□□□□ -0.56
CALD1-223ENST00000496024 HPS5Q9UPZ3 1129 aa11.56□□□□□ -0.56
CALD1-223ENST00000496024 CTDP1Q9Y5B0 961 aaPredicted RBP11.56□□□□□ -0.56
CALD1-223ENST00000496024 MYPNQ86TC9 1320 aa11.56□□□□□ -0.56
CALD1-223ENST00000496024 CCDC85CA6NKD9 419 aa11.55□□□□□ -0.56
CALD1-223ENST00000496024 CCNA1P78396 465 aa11.55□□□□□ -0.56
CALD1-223ENST00000496024 PRKCZQ05513 592 aa11.55□□□□□ -0.56
CALD1-223ENST00000496024 RCSD1Q6JBY9 416 aa11.55□□□□□ -0.56
CALD1-223ENST00000496024 LBX2Q6XYB7 198 aa11.55□□□□□ -0.56
CALD1-223ENST00000496024 ENAHQ8N8S7 591 aaPredicted RBP11.55□□□□□ -0.56
CALD1-223ENST00000496024 NCOA7Q8NI08 942 aa11.55□□□□□ -0.56
CALD1-223ENST00000496024 GPCPD1Q9NPB8 672 aa11.55□□□□□ -0.56
CALD1-223ENST00000496024 FEM1BQ9UK73 627 aa11.55□□□□□ -0.56
CALD1-223ENST00000496024 PPP1R9AQ9ULJ8 1098 aa11.55□□□□□ -0.56
CALD1-223ENST00000496024 SYNPO2Q9UMS6 1093 aa11.55□□□□□ -0.56
CALD1-223ENST00000496024 TNKSO95271 1327 aa11.55□□□□□ -0.56
CALD1-223ENST00000496024 FRMPD2Q68DX3 1309 aaPredicted RBP11.55□□□□□ -0.56
CALD1-223ENST00000496024 MYCP01106 439 aaPredicted RBP11.54□□□□□ -0.56
CALD1-223ENST00000496024 GNRH1P01148 92 aa11.54□□□□□ -0.56
CALD1-223ENST00000496024 NOVP48745 357 aa11.54□□□□□ -0.56
CALD1-223ENST00000496024 FLT3LGP49771 235 aa11.54□□□□□ -0.56
CALD1-223ENST00000496024 TMEM132BQ14DG7 1078 aa11.54□□□□□ -0.56
CALD1-223ENST00000496024 NECTIN1Q15223 517 aa11.54□□□□□ -0.56
CALD1-223ENST00000496024 CCDC178Q5BJE1 867 aa11.54□□□□□ -0.56
CALD1-223ENST00000496024 NCAPG2Q86XI2 1143 aa11.54□□□□□ -0.56
CALD1-223ENST00000496024 MB21D1Q8N884 522 aa11.54□□□□□ -0.56
CALD1-223ENST00000496024 PRPF38AQ8NAV1 312 aaKnown RBP11.54□□□□□ -0.56
CALD1-223ENST00000496024 SH3TC2Q8TF17 1288 aa11.54□□□□□ -0.56
CALD1-223ENST00000496024 DCAF4Q8WV16 495 aa11.54□□□□□ -0.56
CALD1-223ENST00000496024 GMCL1Q96IK5 515 aa11.54□□□□□ -0.56
CALD1-223ENST00000496024 TTC14Q96N46 770 aa11.54□□□□□ -0.56
CALD1-223ENST00000496024 MOV10L1Q9BXT6 1211 aaKnown RBP11.54□□□□□ -0.56
CALD1-223ENST00000496024 SPATC1LQ9H0A9 340 aa11.54□□□□□ -0.56
CALD1-223ENST00000496024 KAT14Q9H8E8 782 aa11.54□□□□□ -0.56
CALD1-223ENST00000496024 HTTP42858 3142 aa11.53□□□□□ -0.56
CALD1-223ENST00000496024 VWA5AO00534 786 aa11.53□□□□□ -0.56
CALD1-223ENST00000496024 IFIT3O14879 490 aaKnown RBP11.53□□□□□ -0.56
CALD1-223ENST00000496024 ZBED4O75132 1171 aa11.53□□□□□ -0.56
CALD1-223ENST00000496024 MAPK4P31152 587 aa11.53□□□□□ -0.56
CALD1-223ENST00000496024 SLC16A2P36021 539 aa11.53□□□□□ -0.56
CALD1-223ENST00000496024 NT5C2P49902 561 aa11.53□□□□□ -0.56
CALD1-223ENST00000496024 STAT2P52630 851 aa11.53□□□□□ -0.56
CALD1-223ENST00000496024 PRMT2P55345 433 aa11.53□□□□□ -0.56
CALD1-223ENST00000496024 SNAP25P60880 206 aa11.53□□□□□ -0.56
CALD1-223ENST00000496024 SLC9C1Q4G0N8 1177 aa11.53□□□□□ -0.56
CALD1-223ENST00000496024 IFIT1BQ5T764 474 aaKnown RBP11.53□□□□□ -0.56
CALD1-223ENST00000496024 RNF20Q5VTR2 975 aa11.53□□□□□ -0.56
CALD1-223ENST00000496024 TTBK2Q6IQ55 1244 aa11.53□□□□□ -0.56
CALD1-223ENST00000496024 GPR142Q7Z601 462 aa11.53□□□□□ -0.56
CALD1-223ENST00000496024 PLEKHH3Q7Z736 793 aa11.53□□□□□ -0.56
CALD1-223ENST00000496024 DGKHQ86XP1 1220 aa11.53□□□□□ -0.56
CALD1-223ENST00000496024 CPXCR1Q8N123 301 aa11.53□□□□□ -0.56
CALD1-223ENST00000496024 PNMA1Q8ND90 353 aa11.53□□□□□ -0.56
CALD1-223ENST00000496024 CHURC1Q8WUH1 139 aa11.53□□□□□ -0.56
CALD1-223ENST00000496024 BIN2Q9UBW5 565 aaPredicted RBP11.53□□□□□ -0.56
CALD1-223ENST00000496024 KIAA0100Q14667 2235 aaKnown RBP11.53□□□□□ -0.56
CALD1-223ENST00000496024 ERICH2A1L162 156 aa11.52□□□□□ -0.57
CALD1-223ENST00000496024 ADCY3O60266 1144 aa11.52□□□□□ -0.57
CALD1-223ENST00000496024 REC8O95072 547 aa11.52□□□□□ -0.57
CALD1-223ENST00000496024 GOLGA8HP0CJ92 632 aa11.52□□□□□ -0.57
CALD1-223ENST00000496024 PDHBP11177 359 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms