RNA–Protein interactions for RNA: ENST00000495910.6

NF1-216, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 8,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-216ENST00000495910 CALUO43852 315 aaPredicted RBP5.66□□□□□ -1.5
NF1-216ENST00000495910 CCDC144BQ3MJ40 725 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 USP48Q86UV5 1035 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 UBE2OQ9C0C9 1292 aaKnown RBP5.66□□□□□ -1.5
NF1-216ENST00000495910 PAPOLBQ9NRJ5 636 aaKnown RBP5.66□□□□□ -1.5
NF1-216ENST00000495910 PARP3Q9Y6F1 533 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 IQANK1A0A1B0GTG1 560 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 CCDC169A6NNP5 214 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 NOP56O00567 594 aaKnown RBP5.66□□□□□ -1.5
NF1-216ENST00000495910 RASSF9O75901 435 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 S100A5P33763 92 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 RTL3Q8N8U3 475 aaKnown RBP5.66□□□□□ -1.5
NF1-216ENST00000495910 IGSF22Q8N9C0 903 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 SNX29Q8TEQ0 813 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 NDEL1Q9GZM8 345 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 DACT1Q9NYF0 836 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 TTLL3Q9Y4R7 772 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 SMCO2A6NFE2 343 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 TADA3O75528 432 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 LDHCP07864 332 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 GNAQP50148 359 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 KPNA2P52292 529 aaKnown RBP5.66□□□□□ -1.5
NF1-216ENST00000495910 GUCY1A3Q02108 690 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 CUL3Q13618 768 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 CTTNQ14247 550 aaKnown RBP5.66□□□□□ -1.5
NF1-216ENST00000495910 DEPDC1Q5TB30 811 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 EFCAB2Q5VUJ9 269 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 ZNF653Q96CK0 615 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 CCDC90BQ9GZT6 254 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 TRIM45Q9H8W5 580 aaPredicted RBP5.66□□□□□ -1.5
NF1-216ENST00000495910 OLA1Q9NTK5 396 aaKnown RBP5.66□□□□□ -1.5
NF1-216ENST00000495910 SYBUQ9NX95 663 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 VPS8Q8N3P4 1428 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 CUX2O14529 1486 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 CALM1P0DP23 149 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 CALM2P0DP24 149 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 CALM3P0DP25 149 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 MYL6BP14649 208 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 GUCY2FP51841 1108 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 STAT2P52630 851 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 GOLGA8FQ08AF8 430 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 GOLGA8DPQ0D2H9 430 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 SLC44A4Q53GD3 710 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 MPRIPQ6WCQ1 1025 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 PDZD4Q76G19 769 aaPredicted RBP5.66□□□□□ -1.5
NF1-216ENST00000495910 PEX26Q7Z412 305 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 PGBD1Q96JS3 809 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 ALG1Q9BT22 464 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 CNPY2Q9Y2B0 182 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 MICU3Q86XE3 530 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 NOSTRINQ8IVI9 506 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 TAGAPQ8N103 731 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 RAPGEF5Q92565 580 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 QKIQ96PU8 341 aaKnown RBP eCLIP5.66□□□□□ -1.52e-7■■■■■ 72.9
NF1-216ENST00000495910 CSRNP1Q96S65 589 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 LARP6Q9BRS8 491 aaKnown RBP5.66□□□□□ -1.5
NF1-216ENST00000495910 MRPL40Q9NQ50 206 aaKnown RBP5.66□□□□□ -1.5
NF1-216ENST00000495910 ARHGEF3Q9NR81 526 aa5.66□□□□□ -1.5
NF1-216ENST00000495910 E2F6O75461 281 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 PSMA3P25788 255 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 ADCY8P40145 1251 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 MYL5Q02045 173 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 TMTC1Q8IUR5 882 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 TMTC2Q8N394 836 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 TTLL11Q8NHH1 800 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 DDX54Q8TDD1 881 aaKnown RBP5.65□□□□□ -1.5
NF1-216ENST00000495910 SKA2Q8WVK7 121 aaPredicted RBP5.65□□□□□ -1.5
NF1-216ENST00000495910 BOLA2Q9H3K6 86 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 SMARCAD1Q9H4L7 1026 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 ZNF277Q9NRM2 450 aaPredicted RBP5.65□□□□□ -1.5
NF1-216ENST00000495910 SERPINB1P30740 379 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 BFSP2Q13515 415 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 E2F4Q16254 413 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 LETM2Q2VYF4 491 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 C11orf88Q6PI97 169 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 INTS9Q9NV88 658 aaKnown RBP5.65□□□□□ -1.5
NF1-216ENST00000495910 RAB20Q9NX57 234 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 KIF17Q9P2E2 1029 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 ANAPC5Q9UJX4 755 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 TSTA3Q13630 321 aaPredicted RBP5.65□□□□□ -1.5
NF1-216ENST00000495910 KIF22Q14807 665 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 WAPLQ7Z5K2 1190 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 DCLK2Q8N568 766 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 RUNDC3BQ96NL0 473 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 TMEM245Q9H330 911 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 CECR2Q9BXF3 1484 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 TRIM75PA6NK02 468 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 DTNBO60941 627 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 DMTNQ08495 405 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 TBC1D8BQ0IIM8 1120 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 SLC12A1Q13621 1099 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 KRT74Q7RTS7 529 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 MCUQ8NE86 351 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 KIF2CQ99661 725 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 KRT23Q9C075 422 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 KIF9Q9HAQ2 790 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 DONSONQ9NYP3 566 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.65□□□□□ -1.5
NF1-216ENST00000495910 EXOC7Q9UPT5 735 aa5.65□□□□□ -1.5
NF1-216ENST00000495910 BAG3O95817 575 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms