RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 PARP1P09874 1014 aaKnown RBP22.72■■□□□ 1.23
ATG3-208ENST00000495756 MS4A4AQ96JQ5 239 aa22.72■■□□□ 1.23
ATG3-208ENST00000495756 SLKQ9H2G2 1235 aaPredicted RBP22.72■■□□□ 1.23
ATG3-208ENST00000495756 SH2B1Q9NRF2 756 aaPredicted RBP22.72■■□□□ 1.23
ATG3-208ENST00000495756 LOC285556D6RIA3 1793 aa22.71■■□□□ 1.23
ATG3-208ENST00000495756 WDR46O15213 610 aaKnown RBP22.71■■□□□ 1.23
ATG3-208ENST00000495756 BMP3P12645 472 aa22.71■■□□□ 1.23
ATG3-208ENST00000495756 KIF5BP33176 963 aa22.71■■□□□ 1.23
ATG3-208ENST00000495756 CCT2P78371 535 aaKnown RBP22.71■■□□□ 1.23
ATG3-208ENST00000495756 ZNF543Q08ER8 600 aa22.71■■□□□ 1.23
ATG3-208ENST00000495756 MOGSQ13724 837 aa22.71■■□□□ 1.23
ATG3-208ENST00000495756 RTN1Q16799 776 aa22.71■■□□□ 1.23
ATG3-208ENST00000495756 CCDC96Q2M329 555 aa22.71■■□□□ 1.23
ATG3-208ENST00000495756 DEFB115Q30KQ5 88 aa22.71■■□□□ 1.23
ATG3-208ENST00000495756 ASPRV1Q53RT3 343 aa22.71■■□□□ 1.23
ATG3-208ENST00000495756 FAM83BQ5T0W9 1011 aa22.71■■□□□ 1.23
ATG3-208ENST00000495756 PROCA1Q8NCQ7 364 aaPredicted RBP22.71■■□□□ 1.23
ATG3-208ENST00000495756 TMX3Q96JJ7 454 aa22.71■■□□□ 1.23
ATG3-208ENST00000495756 MAD2L2Q9UI95 211 aa22.71■■□□□ 1.23
ATG3-208ENST00000495756 RBM19Q9Y4C8 960 aaKnown RBP22.71■■□□□ 1.23
ATG3-208ENST00000495756 FRMPD2Q68DX3 1309 aaPredicted RBP22.7■■□□□ 1.22
ATG3-208ENST00000495756 PALM3A6NDB9 673 aaPredicted RBP22.7■■□□□ 1.22
ATG3-208ENST00000495756 GOLGA8HP0CJ92 632 aa22.7■■□□□ 1.22
ATG3-208ENST00000495756 CETPP11597 493 aa22.7■■□□□ 1.22
ATG3-208ENST00000495756 PPP2R5BQ15173 497 aa22.7■■□□□ 1.22
ATG3-208ENST00000495756 GPATCH4Q5T3I0 446 aaKnown RBP22.7■■□□□ 1.22
ATG3-208ENST00000495756 GADL1Q6ZQY3 521 aa22.7■■□□□ 1.22
ATG3-208ENST00000495756 PAXIP1Q6ZW49 1069 aaPredicted RBP22.7■■□□□ 1.22
ATG3-208ENST00000495756 KCTD1Q719H9 257 aa22.7■■□□□ 1.22
ATG3-208ENST00000495756 FASTKD5Q7L8L6 764 aaKnown RBP22.7■■□□□ 1.22
ATG3-208ENST00000495756 HSCBQ8IWL3 235 aa22.7■■□□□ 1.22
ATG3-208ENST00000495756 STAG2Q8N3U4 1231 aa22.7■■□□□ 1.22
ATG3-208ENST00000495756 NECAB1Q8N987 351 aa22.7■■□□□ 1.22
ATG3-208ENST00000495756 GTF3C6Q969F1 213 aa22.7■■□□□ 1.22
ATG3-208ENST00000495756 NCOA5Q9HCD5 579 aaKnown RBP22.7■■□□□ 1.22
ATG3-208ENST00000495756 FAM217BQ9NTX9 383 aaPredicted RBP22.7■■□□□ 1.22
ATG3-208ENST00000495756 K7ELQ4 463 aaPredicted RBP22.69■■□□□ 1.22
ATG3-208ENST00000495756 CDC27P30260 824 aa22.69■■□□□ 1.22
ATG3-208ENST00000495756 SCRN1Q12765 414 aa22.69■■□□□ 1.22
ATG3-208ENST00000495756 CYP4F22Q6NT55 531 aa22.69■■□□□ 1.22
ATG3-208ENST00000495756 RPAP3Q9H6T3 665 aaPredicted RBP22.69■■□□□ 1.22
ATG3-208ENST00000495756 GPCPD1Q9NPB8 672 aa22.69■■□□□ 1.22
ATG3-208ENST00000495756 RBM28Q9NW13 759 aaKnown RBP22.69■■□□□ 1.22
ATG3-208ENST00000495756 ISY1Q9ULR0 285 aaKnown RBP22.69■■□□□ 1.22
ATG3-208ENST00000495756 CCL15-CCL14A0A0B4J2E2 113 aa22.68■■□□□ 1.22
ATG3-208ENST00000495756 CCDC196A0A1B0GTZ2 297 aa22.68■■□□□ 1.22
ATG3-208ENST00000495756 ADD1P35611 737 aaKnown RBP22.68■■□□□ 1.22
ATG3-208ENST00000495756 CCL15Q16663 113 aa22.68■■□□□ 1.22
ATG3-208ENST00000495756 TREML2Q5T2D2 321 aa22.68■■□□□ 1.22
ATG3-208ENST00000495756 KLRF2D3W0D1 207 aa22.67■■□□□ 1.22
ATG3-208ENST00000495756 GNAQP50148 359 aa22.67■■□□□ 1.22
ATG3-208ENST00000495756 TTBK2Q6IQ55 1244 aa22.67■■□□□ 1.22
ATG3-208ENST00000495756 BRI3BPQ8WY22 251 aa22.67■■□□□ 1.22
ATG3-208ENST00000495756 TANGO6Q9C0B7 1094 aa22.67■■□□□ 1.22
ATG3-208ENST00000495756 AGTPBP1Q9UPW5 1226 aa22.67■■□□□ 1.22
ATG3-208ENST00000495756 MANSC4A6NHS7 340 aaPredicted RBP22.66■■□□□ 1.22
ATG3-208ENST00000495756 TMEM232C9JQI7 657 aa22.66■■□□□ 1.22
ATG3-208ENST00000495756 PLEKHA8P1O95397 391 aa22.66■■□□□ 1.22
ATG3-208ENST00000495756 ANP32AP39687 249 aaKnown RBP22.66■■□□□ 1.22
ATG3-208ENST00000495756 HTRA3P83110 453 aa22.66■■□□□ 1.22
ATG3-208ENST00000495756 ST3GAL1Q11201 340 aa22.66■■□□□ 1.22
ATG3-208ENST00000495756 GRM1Q13255 1194 aa22.66■■□□□ 1.22
ATG3-208ENST00000495756 TMTC3Q6ZXV5 915 aa22.66■■□□□ 1.22
ATG3-208ENST00000495756 CAPNS2Q96L46 248 aa22.66■■□□□ 1.22
ATG3-208ENST00000495756 TESPA1A2RU30 521 aaPredicted RBP22.66■■□□□ 1.22
ATG3-208ENST00000495756 USP17L15C9J2P7 530 aa22.66■■□□□ 1.22
ATG3-208ENST00000495756 USP17L13C9JLJ4 530 aa22.66■■□□□ 1.22
ATG3-208ENST00000495756 USP17L11C9JVI0 530 aa22.66■■□□□ 1.22
ATG3-208ENST00000495756 USP17L18D6R9N7 530 aa22.66■■□□□ 1.22
ATG3-208ENST00000495756 USP17L22D6RA61 530 aa22.66■■□□□ 1.22
ATG3-208ENST00000495756 USP17L17D6RBQ6 530 aa22.66■■□□□ 1.22
ATG3-208ENST00000495756 USP17L19D6RCP7 530 aa22.66■■□□□ 1.22
ATG3-208ENST00000495756 USP17L20D6RJB6 530 aa22.66■■□□□ 1.22
ATG3-208ENST00000495756 DHX16O60231 1041 aaKnown RBP22.66■■□□□ 1.22
ATG3-208ENST00000495756 STAT2P52630 851 aa22.66■■□□□ 1.22
ATG3-208ENST00000495756 USP17L24Q0WX57 530 aa22.66■■□□□ 1.22
ATG3-208ENST00000495756 GPAT2Q6NUI2 795 aa22.66■■□□□ 1.22
ATG3-208ENST00000495756 CCDC83Q8IWF9 413 aa22.66■■□□□ 1.22
ATG3-208ENST00000495756 LZTS2Q9BRK4 669 aa22.66■■□□□ 1.22
ATG3-208ENST00000495756 CPVLQ9H3G5 476 aa22.66■■□□□ 1.22
ATG3-208ENST00000495756 FEM1BQ9UK73 627 aa22.66■■□□□ 1.22
ATG3-208ENST00000495756 PLA2G6O60733 806 aa22.65■■□□□ 1.22
ATG3-208ENST00000495756 HOXA7P31268 230 aaPredicted RBP22.65■■□□□ 1.22
ATG3-208ENST00000495756 NOGQ13253 232 aa22.65■■□□□ 1.22
ATG3-208ENST00000495756 BTNL9Q6UXG8 535 aa22.65■■□□□ 1.22
ATG3-208ENST00000495756 CATSPERGQ6ZRH7 1159 aa22.65■■□□□ 1.22
ATG3-208ENST00000495756 NBPF11Q86T75 865 aa22.65■■□□□ 1.22
ATG3-208ENST00000495756 CMTR1Q8N1G2 835 aaKnown RBP22.65■■□□□ 1.22
ATG3-208ENST00000495756 SRBD1Q8N5C6 995 aaKnown RBP22.65■■□□□ 1.22
ATG3-208ENST00000495756 UBA5Q9GZZ9 404 aa22.65■■□□□ 1.22
ATG3-208ENST00000495756 FBXO28Q9NVF7 368 aa22.65■■□□□ 1.22
ATG3-208ENST00000495756 CPLX1O14810 134 aa22.64■■□□□ 1.21
ATG3-208ENST00000495756 HSPA6P17066 643 aa22.64■■□□□ 1.21
ATG3-208ENST00000495756 SLC16A2P36021 539 aa22.64■■□□□ 1.21
ATG3-208ENST00000495756 FUT2Q10981 343 aa22.64■■□□□ 1.21
ATG3-208ENST00000495756 IKQ13123 557 aaPredicted RBP22.64■■□□□ 1.21
ATG3-208ENST00000495756 BECN1Q14457 450 aa22.64■■□□□ 1.21
ATG3-208ENST00000495756 NTRK3Q16288 839 aa22.64■■□□□ 1.21
ATG3-208ENST00000495756 CHURC1Q8WUH1 139 aa22.64■■□□□ 1.21
ATG3-208ENST00000495756 PTPN18Q99952 460 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms