RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 ESR2Q92731 530 aa10□□□□□ -0.81
EPHA4-213ENST00000495693 INSM2Q96T92 566 aaPredicted RBP10□□□□□ -0.81
EPHA4-213ENST00000495693 NOL10Q9BSC4 688 aaKnown RBP10□□□□□ -0.81
EPHA4-213ENST00000495693 NUP62CLQ9H1M0 184 aa10□□□□□ -0.81
EPHA4-213ENST00000495693 BRPF3Q9ULD4 1205 aa10□□□□□ -0.81
EPHA4-213ENST00000495693 TAF6LQ9Y6J9 622 aa10□□□□□ -0.81
EPHA4-213ENST00000495693 SBF2Q86WG5 1849 aa10□□□□□ -0.81
EPHA4-213ENST00000495693 YEATS4O95619 227 aa9.99□□□□□ -0.81
EPHA4-213ENST00000495693 GPC1P35052 558 aa9.99□□□□□ -0.81
EPHA4-213ENST00000495693 HAND2P61296 217 aa9.99□□□□□ -0.81
EPHA4-213ENST00000495693 TMEM67Q5HYA8 995 aa9.99□□□□□ -0.81
EPHA4-213ENST00000495693 TTLL5Q6EMB2 1281 aa9.99□□□□□ -0.81
EPHA4-213ENST00000495693 CCDC73Q6ZRK6 1079 aa9.99□□□□□ -0.81
EPHA4-213ENST00000495693 C15orf52Q6ZUT6 534 aaKnown RBP9.99□□□□□ -0.81
EPHA4-213ENST00000495693 ZNF804AQ7Z570 1209 aa9.99□□□□□ -0.81
EPHA4-213ENST00000495693 FBXO33Q7Z6M2 555 aa9.99□□□□□ -0.81
EPHA4-213ENST00000495693 IQCA1Q86XH1 822 aa9.99□□□□□ -0.81
EPHA4-213ENST00000495693 GAS2L3Q86XJ1 694 aa9.99□□□□□ -0.81
EPHA4-213ENST00000495693 FLAD1Q8NFF5 587 aa9.99□□□□□ -0.81
EPHA4-213ENST00000495693 BICD2Q8TD16 824 aa9.99□□□□□ -0.81
EPHA4-213ENST00000495693 LEO1Q8WVC0 666 aaPredicted RBP9.99□□□□□ -0.81
EPHA4-213ENST00000495693 UBAC1Q9BSL1 405 aa9.99□□□□□ -0.81
EPHA4-213ENST00000495693 ZNF395Q9H8N7 513 aaPredicted RBP9.99□□□□□ -0.81
EPHA4-213ENST00000495693 ATP8A2Q9NTI2 1148 aa9.99□□□□□ -0.81
EPHA4-213ENST00000495693 ORC3Q9UBD5 711 aaPredicted RBP9.99□□□□□ -0.81
EPHA4-213ENST00000495693 ARPP21Q9UBL0 812 aaPredicted RBP9.99□□□□□ -0.81
EPHA4-213ENST00000495693 ABCF2Q9UG63 623 aa9.99□□□□□ -0.81
EPHA4-213ENST00000495693 SLC12A7Q9Y666 1083 aa9.99□□□□□ -0.81
EPHA4-213ENST00000495693 C4AP0C0L4 1744 aa9.99□□□□□ -0.81
EPHA4-213ENST00000495693 PIK3CDO00329 1044 aa9.98□□□□□ -0.81
EPHA4-213ENST00000495693 IFIT3O14879 490 aaKnown RBP9.98□□□□□ -0.81
EPHA4-213ENST00000495693 FOXP2O15409 715 aa9.98□□□□□ -0.81
EPHA4-213ENST00000495693 JAK2O60674 1132 aa9.98□□□□□ -0.81
EPHA4-213ENST00000495693 CHGBP05060 677 aa9.98□□□□□ -0.81
EPHA4-213ENST00000495693 TPM3P06753 285 aa9.98□□□□□ -0.81
EPHA4-213ENST00000495693 LDHCP07864 332 aa9.98□□□□□ -0.81
EPHA4-213ENST00000495693 CTSOP43234 321 aaPredicted RBP9.98□□□□□ -0.81
EPHA4-213ENST00000495693 RNF144AP50876 292 aaPredicted RBP9.98□□□□□ -0.81
EPHA4-213ENST00000495693 CCT2P78371 535 aaKnown RBP9.98□□□□□ -0.81
EPHA4-213ENST00000495693 CLN3Q13286 438 aa9.98□□□□□ -0.81
EPHA4-213ENST00000495693 WTAPQ15007 396 aa9.98□□□□□ -0.81
EPHA4-213ENST00000495693 SAFBQ15424 915 aaKnown RBP eCLIP9.98□□□□□ -0.81
EPHA4-213ENST00000495693 FOXD4L6Q3SYB3 417 aaPredicted RBP9.98□□□□□ -0.81
EPHA4-213ENST00000495693 APOA5Q6Q788 366 aa9.98□□□□□ -0.81
EPHA4-213ENST00000495693 FOXD4L3Q6VB84 417 aaPredicted RBP9.98□□□□□ -0.81
EPHA4-213ENST00000495693 BICDL1Q6ZP65 573 aa9.98□□□□□ -0.81
EPHA4-213ENST00000495693 TTC6Q86TZ1 520 aa9.98□□□□□ -0.81
EPHA4-213ENST00000495693 RPGRQ92834 1020 aaKnown RBP9.98□□□□□ -0.81
EPHA4-213ENST00000495693 DDX11Q96FC9 970 aa9.98□□□□□ -0.81
EPHA4-213ENST00000495693 RBM17Q96I25 401 aaKnown RBP9.98□□□□□ -0.81
EPHA4-213ENST00000495693 LRRC2Q9BYS8 371 aa9.98□□□□□ -0.81
EPHA4-213ENST00000495693 CRNKL1Q9BZJ0 848 aaKnown RBP9.98□□□□□ -0.81
EPHA4-213ENST00000495693 TNMDQ9H2S6 317 aa9.98□□□□□ -0.81
EPHA4-213ENST00000495693 ZNF287Q9HBT7 754 aa9.98□□□□□ -0.81
EPHA4-213ENST00000495693 RBM28Q9NW13 759 aaKnown RBP9.98□□□□□ -0.81
EPHA4-213ENST00000495693 XDHP47989 1333 aa9.98□□□□□ -0.81
EPHA4-213ENST00000495693 KIAA1551Q9HCM1 1747 aa9.98□□□□□ -0.81
EPHA4-213ENST00000495693 CASZ1Q86V15 1759 aa9.97□□□□□ -0.81
EPHA4-213ENST00000495693 A0A1W2PRU2 124 aa9.97□□□□□ -0.81
EPHA4-213ENST00000495693 GOLGA8AA7E2F4 631 aa9.97□□□□□ -0.81
EPHA4-213ENST00000495693 GSG1L2A8MUP6 293 aa9.97□□□□□ -0.81
EPHA4-213ENST00000495693 GADD45BO75293 160 aaPredicted RBP9.97□□□□□ -0.81
EPHA4-213ENST00000495693 BBOX1O75936 387 aa9.97□□□□□ -0.81
EPHA4-213ENST00000495693 BAG3O95817 575 aa9.97□□□□□ -0.81
EPHA4-213ENST00000495693 ATP2B4P23634 1241 aa9.97□□□□□ -0.81
EPHA4-213ENST00000495693 MSNP26038 577 aaKnown RBP9.97□□□□□ -0.81
EPHA4-213ENST00000495693 IARSP41252 1262 aaKnown RBP9.97□□□□□ -0.81
EPHA4-213ENST00000495693 PPARAQ07869 468 aa9.97□□□□□ -0.81
EPHA4-213ENST00000495693 GNL2Q13823 731 aaKnown RBP9.97□□□□□ -0.81
EPHA4-213ENST00000495693 FERMT3Q86UX7 667 aa9.97□□□□□ -0.81
EPHA4-213ENST00000495693 FBXO18Q8NFZ0 1043 aa9.97□□□□□ -0.81
EPHA4-213ENST00000495693 RNF217Q8TC41 542 aa9.97□□□□□ -0.81
EPHA4-213ENST00000495693 CCDC34Q96HJ3 373 aa9.97□□□□□ -0.81
EPHA4-213ENST00000495693 FAM84BQ96KN1 310 aaPredicted RBP9.97□□□□□ -0.81
EPHA4-213ENST00000495693 ARMT1Q9H993 441 aa9.97□□□□□ -0.81
EPHA4-213ENST00000495693 RTEL1Q9NZ71 1219 aa9.97□□□□□ -0.81
EPHA4-213ENST00000495693 NXF1Q9UBU9 619 aaKnown RBP9.97□□□□□ -0.81
EPHA4-213ENST00000495693 CCDC39Q9UFE4 941 aa9.97□□□□□ -0.81
EPHA4-213ENST00000495693 RCOR1Q9UKL0 485 aa9.97□□□□□ -0.81
EPHA4-213ENST00000495693 CHD4Q14839 1912 aa9.96□□□□□ -0.81
EPHA4-213ENST00000495693 MYH13Q9UKX3 1938 aa9.96□□□□□ -0.81
EPHA4-213ENST00000495693 MYH15Q9Y2K3 1946 aa9.96□□□□□ -0.81
EPHA4-213ENST00000495693 A0A1W2PQ27 194 aa9.96□□□□□ -0.82
EPHA4-213ENST00000495693 A0A1W2PQ64 194 aa9.96□□□□□ -0.82
EPHA4-213ENST00000495693 A0A1W2PQD8 194 aa9.96□□□□□ -0.82
EPHA4-213ENST00000495693 GOLGA6L6A8MZA4 724 aa9.96□□□□□ -0.82
EPHA4-213ENST00000495693 B4E1Z4 1266 aa9.96□□□□□ -0.82
EPHA4-213ENST00000495693 TERTO14746 1132 aaKnown RBP9.96□□□□□ -0.82
EPHA4-213ENST00000495693 CTDNEP1O95476 244 aa9.96□□□□□ -0.82
EPHA4-213ENST00000495693 IFNAR1P17181 557 aa9.96□□□□□ -0.82
EPHA4-213ENST00000495693 ANTXR2P58335 489 aa9.96□□□□□ -0.82
EPHA4-213ENST00000495693 AKAP17AQ02040 695 aaKnown RBP9.96□□□□□ -0.82
EPHA4-213ENST00000495693 PDE4BQ07343 736 aa9.96□□□□□ -0.82
EPHA4-213ENST00000495693 SSRP1Q08945 709 aaKnown RBP9.96□□□□□ -0.82
EPHA4-213ENST00000495693 SF3A1Q15459 793 aaKnown RBP9.96□□□□□ -0.82
EPHA4-213ENST00000495693 ZNF772Q68DY9 489 aaPredicted RBP9.96□□□□□ -0.82
EPHA4-213ENST00000495693 SASS6Q6UVJ0 657 aa9.96□□□□□ -0.82
EPHA4-213ENST00000495693 KRT27Q7Z3Y8 459 aa9.96□□□□□ -0.82
EPHA4-213ENST00000495693 DZIP1Q86YF9 867 aaKnown RBP9.96□□□□□ -0.82
EPHA4-213ENST00000495693 TBC1D10CQ8IV04 446 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms