RNA–Protein interactions for RNA: ENST00000495532.1

HLA-DOA-206, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-206ENST00000495532 SHMT1P34896 483 aa13.83□□□□□ -0.2
HLA-DOA-206ENST00000495532 TMEM31Q5JXX7 168 aa13.83□□□□□ -0.2
HLA-DOA-206ENST00000495532 CCSAPQ6IQ19 270 aaPredicted RBP13.83□□□□□ -0.2
HLA-DOA-206ENST00000495532 MB21D1Q8N884 522 aa13.83□□□□□ -0.2
HLA-DOA-206ENST00000495532 KLHDC9Q8NEP7 349 aa13.83□□□□□ -0.2
HLA-DOA-206ENST00000495532 NUP133Q8WUM0 1156 aa13.83□□□□□ -0.2
HLA-DOA-206ENST00000495532 TINF2Q9BSI4 451 aa13.83□□□□□ -0.2
HLA-DOA-206ENST00000495532 TANGO6Q9C0B7 1094 aa13.83□□□□□ -0.2
HLA-DOA-206ENST00000495532 SLC28A3Q9HAS3 691 aa13.83□□□□□ -0.2
HLA-DOA-206ENST00000495532 MOXD2PA6NHM9 499 aa13.82□□□□□ -0.2
HLA-DOA-206ENST00000495532 ERC2O15083 957 aa13.82□□□□□ -0.2
HLA-DOA-206ENST00000495532 CYP2E1P05181 493 aaPredicted RBP13.82□□□□□ -0.2
HLA-DOA-206ENST00000495532 FCER1AP12319 257 aa13.82□□□□□ -0.2
HLA-DOA-206ENST00000495532 DSG3P32926 999 aa13.82□□□□□ -0.2
HLA-DOA-206ENST00000495532 CDK7P50613 346 aa13.82□□□□□ -0.2
HLA-DOA-206ENST00000495532 MTX1Q13505 466 aa13.82□□□□□ -0.2
HLA-DOA-206ENST00000495532 PLS1Q14651 629 aa13.82□□□□□ -0.2
HLA-DOA-206ENST00000495532 SEPT2Q15019 361 aa13.82□□□□□ -0.2
HLA-DOA-206ENST00000495532 AAK1Q2M2I8 961 aa13.82□□□□□ -0.2
HLA-DOA-206ENST00000495532 KIAA1755Q5JYT7 1200 aa13.82□□□□□ -0.2
HLA-DOA-206ENST00000495532 TMEM199Q8N511 208 aa13.82□□□□□ -0.2
HLA-DOA-206ENST00000495532 HERVK_113Q902F9 699 aa13.82□□□□□ -0.2
HLA-DOA-206ENST00000495532 CABP5Q9NP86 173 aa13.82□□□□□ -0.2
HLA-DOA-206ENST00000495532 HDAC5Q9UQL6 1122 aa13.82□□□□□ -0.2
HLA-DOA-206ENST00000495532 MROH7Q68CQ1 1323 aa13.82□□□□□ -0.2
HLA-DOA-206ENST00000495532 MYH8P13535 1937 aa13.82□□□□□ -0.2
HLA-DOA-206ENST00000495532 MYADML2A6NDP7 307 aa13.81□□□□□ -0.2
HLA-DOA-206ENST00000495532 PGK2P07205 417 aa13.81□□□□□ -0.2
HLA-DOA-206ENST00000495532 KCNA10Q16322 511 aa13.81□□□□□ -0.2
HLA-DOA-206ENST00000495532 ZNF792Q3KQV3 632 aa13.81□□□□□ -0.2
HLA-DOA-206ENST00000495532 ALYREFQ86V81 257 aaKnown RBP13.81□□□□□ -0.2
HLA-DOA-206ENST00000495532 MICALL1Q8N3F8 863 aa13.81□□□□□ -0.2
HLA-DOA-206ENST00000495532 KHSRPQ92945 711 aaKnown RBP eCLIP13.81□□□□□ -0.2
HLA-DOA-206ENST00000495532 ATG4CQ96DT6 458 aa13.81□□□□□ -0.2
HLA-DOA-206ENST00000495532 CDCA7LQ96GN5 454 aa13.81□□□□□ -0.2
HLA-DOA-206ENST00000495532 PPP1R12CQ9BZL4 782 aa13.81□□□□□ -0.2
HLA-DOA-206ENST00000495532 ELP1O95163 1332 aa13.81□□□□□ -0.2
HLA-DOA-206ENST00000495532 BRWD1Q9NSI6 2320 aa13.8□□□□□ -0.2
HLA-DOA-206ENST00000495532 MCM3APO60318 1980 aa13.8□□□□□ -0.2
HLA-DOA-206ENST00000495532 GPR37L1O60883 481 aa13.8□□□□□ -0.2
HLA-DOA-206ENST00000495532 ALDH1L2Q3SY69 923 aa13.8□□□□□ -0.2
HLA-DOA-206ENST00000495532 FAM126BQ8IXS8 530 aa13.8□□□□□ -0.2
HLA-DOA-206ENST00000495532 IL23AQ9NPF7 189 aa13.8□□□□□ -0.2
HLA-DOA-206ENST00000495532 PIH1D3Q9NQM4 214 aaKnown RBP13.8□□□□□ -0.2
HLA-DOA-206ENST00000495532 DIS3Q9Y2L1 958 aaKnown RBP13.8□□□□□ -0.2
HLA-DOA-206ENST00000495532 IGSF3O75054 1194 aa13.79□□□□□ -0.2
HLA-DOA-206ENST00000495532 FLOT1O75955 427 aa13.79□□□□□ -0.2
HLA-DOA-206ENST00000495532 CST5P28325 142 aaPredicted RBP13.79□□□□□ -0.2
HLA-DOA-206ENST00000495532 USP5P45974 858 aa13.79□□□□□ -0.2
HLA-DOA-206ENST00000495532 PLCD1P51178 756 aa13.79□□□□□ -0.2
HLA-DOA-206ENST00000495532 IRX5P78411 483 aaPredicted RBP13.79□□□□□ -0.2
HLA-DOA-206ENST00000495532 TMEM132BQ14DG7 1078 aa13.79□□□□□ -0.2
HLA-DOA-206ENST00000495532 TTC6Q86TZ1 520 aa13.79□□□□□ -0.2
HLA-DOA-206ENST00000495532 MIGA1Q8NAN2 632 aa13.79□□□□□ -0.2
HLA-DOA-206ENST00000495532 GLT1D1Q96MS3 346 aa13.79□□□□□ -0.2
HLA-DOA-206ENST00000495532 MMP19Q99542 508 aa13.79□□□□□ -0.2
HLA-DOA-206ENST00000495532 SMC4Q9NTJ3 1288 aa13.79□□□□□ -0.2
HLA-DOA-206ENST00000495532 FAM86C2PA6NEL3 165 aa13.78□□□□□ -0.2
HLA-DOA-206ENST00000495532 APBB1O00213 710 aa13.78□□□□□ -0.2
HLA-DOA-206ENST00000495532 TLL1O43897 1013 aa13.78□□□□□ -0.2
HLA-DOA-206ENST00000495532 SLC25A27O95847 323 aa13.78□□□□□ -0.2
HLA-DOA-206ENST00000495532 MYOGP15173 224 aa13.78□□□□□ -0.2
HLA-DOA-206ENST00000495532 POU3F3P20264 500 aaPredicted RBP13.78□□□□□ -0.2
HLA-DOA-206ENST00000495532 CYP7A1P22680 504 aa13.78□□□□□ -0.2
HLA-DOA-206ENST00000495532 CYP2C18P33260 490 aa13.78□□□□□ -0.2
HLA-DOA-206ENST00000495532 RABGGTBP53611 331 aa13.78□□□□□ -0.2
HLA-DOA-206ENST00000495532 GABPAQ06546 454 aa13.78□□□□□ -0.2
HLA-DOA-206ENST00000495532 SKIV2LQ15477 1246 aaKnown RBP13.78□□□□□ -0.2
HLA-DOA-206ENST00000495532 TTC39AQ5SRH9 613 aa13.78□□□□□ -0.2
HLA-DOA-206ENST00000495532 PPP2R2DQ66LE6 453 aa13.78□□□□□ -0.2
HLA-DOA-206ENST00000495532 CNPY2Q9Y2B0 182 aa13.78□□□□□ -0.2
HLA-DOA-206ENST00000495532 ARVCFO00192 962 aa13.77□□□□□ -0.21
HLA-DOA-206ENST00000495532 ADCY6O43306 1168 aa13.77□□□□□ -0.21
HLA-DOA-206ENST00000495532 CD4P01730 458 aa13.77□□□□□ -0.21
HLA-DOA-206ENST00000495532 FGBP02675 491 aa13.77□□□□□ -0.21
HLA-DOA-206ENST00000495532 ASGR1P07306 291 aa13.77□□□□□ -0.21
HLA-DOA-206ENST00000495532 ZAP70P43403 619 aa13.77□□□□□ -0.21
HLA-DOA-206ENST00000495532 EVX2Q03828 476 aa13.77□□□□□ -0.21
HLA-DOA-206ENST00000495532 KCTD2Q14681 263 aa13.77□□□□□ -0.21
HLA-DOA-206ENST00000495532 OTOP2Q7RTS6 562 aa13.77□□□□□ -0.21
HLA-DOA-206ENST00000495532 RIOX2Q8IUF8 465 aa13.77□□□□□ -0.21
HLA-DOA-206ENST00000495532 DBNDD2Q9BQY9 259 aa13.77□□□□□ -0.21
HLA-DOA-206ENST00000495532 MTIF3Q9H2K0 278 aaKnown RBP13.77□□□□□ -0.21
HLA-DOA-206ENST00000495532 ADAMTS5Q9UNA0 930 aa13.77□□□□□ -0.21
HLA-DOA-206ENST00000495532 MTCH2Q9Y6C9 303 aa13.77□□□□□ -0.21
HLA-DOA-206ENST00000495532 UMODL1Q5DID0 1318 aa13.76□□□□□ -0.21
HLA-DOA-206ENST00000495532 A0A0U1RQG5 324 aaPredicted RBP13.76□□□□□ -0.21
HLA-DOA-206ENST00000495532 DUSP11O75319 330 aaKnown RBP13.76□□□□□ -0.21
HLA-DOA-206ENST00000495532 SNAI1O95863 264 aaPredicted RBP13.76□□□□□ -0.21
HLA-DOA-206ENST00000495532 CCDC158Q5M9N0 1113 aa13.76□□□□□ -0.21
HLA-DOA-206ENST00000495532 CERS3Q8IU89 383 aa13.76□□□□□ -0.21
HLA-DOA-206ENST00000495532 SIAH1Q8IUQ4 282 aa13.76□□□□□ -0.21
HLA-DOA-206ENST00000495532 SPICE1Q8N0Z3 855 aa13.76□□□□□ -0.21
HLA-DOA-206ENST00000495532 PCSK9Q8NBP7 692 aaKnown RBP13.76□□□□□ -0.21
HLA-DOA-206ENST00000495532 ZNF512BQ96KM6 892 aaPredicted RBP13.76□□□□□ -0.21
HLA-DOA-206ENST00000495532 SNX27Q96L92 541 aa13.76□□□□□ -0.21
HLA-DOA-206ENST00000495532 FAM184BQ9ULE4 1060 aa13.76□□□□□ -0.21
HLA-DOA-206ENST00000495532 NOB1Q9ULX3 412 aaKnown RBP13.76□□□□□ -0.21
HLA-DOA-206ENST00000495532 PCDHA11Q9Y5I1 949 aa13.76□□□□□ -0.21
HLA-DOA-206ENST00000495532 RFXAPO00287 272 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms