RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 GPR101Q96P66 508 aaPredicted RBP17.43■□□□□ 0.38
CALD1-222ENST00000495522 RTFDC1Q9BY42 306 aaPredicted RBP17.43■□□□□ 0.38
CALD1-222ENST00000495522 SAMSN1Q9NSI8 373 aaKnown RBP17.43■□□□□ 0.38
CALD1-222ENST00000495522 MAD2L2Q9UI95 211 aa17.43■□□□□ 0.38
CALD1-222ENST00000495522 SYNRGQ9UMZ2 1314 aa17.42■□□□□ 0.38
CALD1-222ENST00000495522 USP17L3A6NCW0 530 aa17.42■□□□□ 0.38
CALD1-222ENST00000495522 USP17L4A6NCW7 530 aa17.42■□□□□ 0.38
CALD1-222ENST00000495522 UFL1O94874 794 aa17.42■□□□□ 0.38
CALD1-222ENST00000495522 CUL4BQ13620 913 aa17.42■□□□□ 0.38
CALD1-222ENST00000495522 E2F4Q16254 413 aa17.42■□□□□ 0.38
CALD1-222ENST00000495522 SPATA1Q5VX52 437 aa17.42■□□□□ 0.38
CALD1-222ENST00000495522 ZNF772Q68DY9 489 aaPredicted RBP17.42■□□□□ 0.38
CALD1-222ENST00000495522 USP17L1Q7RTZ2 530 aa17.42■□□□□ 0.38
CALD1-222ENST00000495522 GPKOWQ92917 476 aaPredicted RBP eCLIP17.42■□□□□ 0.38
CALD1-222ENST00000495522 ZNF287Q9HBT7 754 aa17.42■□□□□ 0.38
CALD1-222ENST00000495522 ADAMTS3O15072 1205 aa17.42■□□□□ 0.38
CALD1-222ENST00000495522 ATP2B4P23634 1241 aa17.42■□□□□ 0.38
CALD1-222ENST00000495522 CASP1P29466 404 aa17.42■□□□□ 0.38
CALD1-222ENST00000495522 PTPN21Q16825 1174 aa17.42■□□□□ 0.38
CALD1-222ENST00000495522 CRY2Q49AN0 593 aa17.42■□□□□ 0.38
CALD1-222ENST00000495522 MAPKAPK5Q8IW41 473 aa17.42■□□□□ 0.38
CALD1-222ENST00000495522 CD209Q9NNX6 404 aa17.42■□□□□ 0.38
CALD1-222ENST00000495522 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.41■□□□□ 0.38
CALD1-222ENST00000495522 ARHGAP6O43182 974 aa17.41■□□□□ 0.38
CALD1-222ENST00000495522 CD44P16070 742 aaKnown RBP17.41■□□□□ 0.38
CALD1-222ENST00000495522 ST5P78524 1137 aa17.41■□□□□ 0.38
CALD1-222ENST00000495522 GOLGA8FQ08AF8 430 aa17.41■□□□□ 0.38
CALD1-222ENST00000495522 GOLGA8DPQ0D2H9 430 aa17.41■□□□□ 0.38
CALD1-222ENST00000495522 NR1I3Q14994 352 aa17.41■□□□□ 0.38
CALD1-222ENST00000495522 CCDC148Q8NFR7 591 aa17.41■□□□□ 0.38
CALD1-222ENST00000495522 GGA1Q9UJY5 639 aa17.41■□□□□ 0.38
CALD1-222ENST00000495522 A0A1B0GTH6 734 aa17.4■□□□□ 0.38
CALD1-222ENST00000495522 IL1R1P14778 569 aa17.4■□□□□ 0.38
CALD1-222ENST00000495522 RASA1P20936 1047 aa17.4■□□□□ 0.38
CALD1-222ENST00000495522 LONP1P36776 959 aaKnown RBP17.4■□□□□ 0.38
CALD1-222ENST00000495522 BTDP43251 543 aa17.4■□□□□ 0.38
CALD1-222ENST00000495522 IL17AQ16552 155 aa17.4■□□□□ 0.38
CALD1-222ENST00000495522 GALNT17Q6IS24 598 aa17.4■□□□□ 0.38
CALD1-222ENST00000495522 KLHL10Q6JEL2 608 aa17.4■□□□□ 0.38
CALD1-222ENST00000495522 PDXDC2PQ6P474 469 aa17.4■□□□□ 0.38
CALD1-222ENST00000495522 SYT10Q6XYQ8 523 aa17.4■□□□□ 0.38
CALD1-222ENST00000495522 TMEM139Q8IV31 216 aa17.4■□□□□ 0.38
CALD1-222ENST00000495522 SLC44A5Q8NCS7 719 aa17.4■□□□□ 0.38
CALD1-222ENST00000495522 RBM17Q96I25 401 aaKnown RBP17.4■□□□□ 0.38
CALD1-222ENST00000495522 LRRC4BQ9NT99 713 aa17.4■□□□□ 0.38
CALD1-222ENST00000495522 SAP30BPQ9UHR5 308 aaKnown RBP17.4■□□□□ 0.38
CALD1-222ENST00000495522 FAM205AQ6ZU69 1335 aa17.4■□□□□ 0.38
CALD1-222ENST00000495522 CCDC194A0A1B0GVG4 234 aa17.4■□□□□ 0.38
CALD1-222ENST00000495522 PLCG2P16885 1265 aa17.4■□□□□ 0.38
CALD1-222ENST00000495522 PPP4R3BQ5MIZ7 849 aa17.4■□□□□ 0.38
CALD1-222ENST00000495522 HOMER1Q86YM7 354 aa17.4■□□□□ 0.38
CALD1-222ENST00000495522 FAM177A1Q8N128 213 aaPredicted RBP17.4■□□□□ 0.38
CALD1-222ENST00000495522 C4orf32Q8N8J7 132 aa17.4■□□□□ 0.38
CALD1-222ENST00000495522 DAGLBQ8NCG7 672 aa17.4■□□□□ 0.38
CALD1-222ENST00000495522 ERO1AQ96HE7 468 aa17.4■□□□□ 0.38
CALD1-222ENST00000495522 TMEM47Q9BQJ4 181 aa17.4■□□□□ 0.38
CALD1-222ENST00000495522 LZTS2Q9BRK4 669 aa17.4■□□□□ 0.38
CALD1-222ENST00000495522 ZNF215Q9UL58 517 aaPredicted RBP17.4■□□□□ 0.38
CALD1-222ENST00000495522 GPR75-ASB3A0A0A6YYF3 556 aa17.39■□□□□ 0.37
CALD1-222ENST00000495522 PPP1R3GB7ZBB8 358 aa17.39■□□□□ 0.37
CALD1-222ENST00000495522 M0R2N6 131 aa17.39■□□□□ 0.37
CALD1-222ENST00000495522 ZSCAN12O43309 604 aa17.39■□□□□ 0.37
CALD1-222ENST00000495522 GTPBP6O43824 516 aaPredicted RBP17.39■□□□□ 0.37
CALD1-222ENST00000495522 SLU7O95391 586 aaKnown RBP17.39■□□□□ 0.37
CALD1-222ENST00000495522 TXLNAP40222 546 aa17.39■□□□□ 0.37
CALD1-222ENST00000495522 BAG1Q99933 345 aaPredicted RBP17.39■□□□□ 0.37
CALD1-222ENST00000495522 BCL11BQ9C0K0 894 aaPredicted RBP17.39■□□□□ 0.37
CALD1-222ENST00000495522 STX8Q9UNK0 236 aa17.39■□□□□ 0.37
CALD1-222ENST00000495522 PALM3A6NDB9 673 aaPredicted RBP17.39■□□□□ 0.37
CALD1-222ENST00000495522 STX10O60499 249 aa17.39■□□□□ 0.37
CALD1-222ENST00000495522 ETF1P62495 437 aaKnown RBP17.39■□□□□ 0.37
CALD1-222ENST00000495522 CDKAL1Q5VV42 579 aa17.39■□□□□ 0.37
CALD1-222ENST00000495522 WWC2Q6AWC2 1192 aa17.39■□□□□ 0.37
CALD1-222ENST00000495522 TEX11Q8IYF3 940 aa17.39■□□□□ 0.37
CALD1-222ENST00000495522 TC2NQ8N9U0 490 aa17.39■□□□□ 0.37
CALD1-222ENST00000495522 L2HGDHQ9H9P8 463 aa17.39■□□□□ 0.37
CALD1-222ENST00000495522 BARHL2Q9NY43 387 aa17.39■□□□□ 0.37
CALD1-222ENST00000495522 UBR3Q6ZT12 1888 aa17.38■□□□□ 0.37
CALD1-222ENST00000495522 CDK5RAP2Q96SN8 1893 aa17.38■□□□□ 0.37
CALD1-222ENST00000495522 SERPINB2P05120 415 aa17.38■□□□□ 0.37
CALD1-222ENST00000495522 GYS1P13807 737 aa17.38■□□□□ 0.37
CALD1-222ENST00000495522 STX17P56962 302 aa17.38■□□□□ 0.37
CALD1-222ENST00000495522 NAA30Q147X3 362 aaPredicted RBP17.38■□□□□ 0.37
CALD1-222ENST00000495522 SLC35G1Q2M3R5 365 aa17.38■□□□□ 0.37
CALD1-222ENST00000495522 TYW1BQ6NUM6 668 aa17.38■□□□□ 0.37
CALD1-222ENST00000495522 C16orf86Q6ZW13 317 aa17.38■□□□□ 0.37
CALD1-222ENST00000495522 APTXQ7Z2E3 356 aaKnown RBP17.38■□□□□ 0.37
CALD1-222ENST00000495522 SLF2Q8IX21 1173 aa17.38■□□□□ 0.37
CALD1-222ENST00000495522 STAMQ92783 540 aa17.38■□□□□ 0.37
CALD1-222ENST00000495522 CTAGE1Q96RT6 745 aa17.38■□□□□ 0.37
CALD1-222ENST00000495522 CGNQ9P2M7 1197 aaKnown RBP17.38■□□□□ 0.37
CALD1-222ENST00000495522 BRWD3Q6RI45 1802 aa17.38■□□□□ 0.37
CALD1-222ENST00000495522 STXBP3O00186 592 aa17.38■□□□□ 0.37
CALD1-222ENST00000495522 CYTH3O43739 400 aa17.38■□□□□ 0.37
CALD1-222ENST00000495522 BBOX1O75936 387 aa17.38■□□□□ 0.37
CALD1-222ENST00000495522 CDK8P49336 464 aa17.38■□□□□ 0.37
CALD1-222ENST00000495522 HEATR3Q7Z4Q2 680 aa17.38■□□□□ 0.37
CALD1-222ENST00000495522 REXO1L1PQ8IX06 675 aa17.38■□□□□ 0.37
CALD1-222ENST00000495522 SMYD4Q8IYR2 804 aaPredicted RBP17.38■□□□□ 0.37
CALD1-222ENST00000495522 RASGRP4Q8TDF6 673 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms