RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 CHRDQ9H2X0 955 aa9.37□□□□□ -0.91
RPGR-210ENST00000494841 IGFLR1Q9H665 355 aa9.37□□□□□ -0.91
RPGR-210ENST00000494841 FOXD3Q9UJU5 478 aaPredicted RBP9.37□□□□□ -0.91
RPGR-210ENST00000494841 WWC3Q9ULE0 1092 aa9.37□□□□□ -0.91
RPGR-210ENST00000494841 SLC6A14Q9UN76 642 aa9.37□□□□□ -0.91
RPGR-210ENST00000494841 N4BP2Q86UW6 1770 aaPredicted RBP9.37□□□□□ -0.91
RPGR-210ENST00000494841 PDE8AO60658 829 aa9.36□□□□□ -0.91
RPGR-210ENST00000494841 ARHGEF15O94989 841 aa9.36□□□□□ -0.91
RPGR-210ENST00000494841 CYP2E1P05181 493 aaPredicted RBP9.36□□□□□ -0.91
RPGR-210ENST00000494841 PSAPP07602 524 aa9.36□□□□□ -0.91
RPGR-210ENST00000494841 DPEP1P16444 411 aa9.36□□□□□ -0.91
RPGR-210ENST00000494841 NRLP54845 237 aa9.36□□□□□ -0.91
RPGR-210ENST00000494841 FOXO4P98177 505 aa9.36□□□□□ -0.91
RPGR-210ENST00000494841 MAP3K10Q02779 954 aa9.36□□□□□ -0.91
RPGR-210ENST00000494841 PLAURQ03405 335 aa9.36□□□□□ -0.91
RPGR-210ENST00000494841 C2CD5Q86YS7 1000 aa9.36□□□□□ -0.91
RPGR-210ENST00000494841 SNX29Q8TEQ0 813 aa9.36□□□□□ -0.91
RPGR-210ENST00000494841 DMRTB1Q96MA1 342 aa9.36□□□□□ -0.91
RPGR-210ENST00000494841 ASB16Q96NS5 453 aa9.36□□□□□ -0.91
RPGR-210ENST00000494841 CRBNQ96SW2 442 aa9.36□□□□□ -0.91
RPGR-210ENST00000494841 NAGPAQ9UK23 515 aa9.36□□□□□ -0.91
RPGR-210ENST00000494841 LAMB2P55268 1798 aa9.36□□□□□ -0.91
RPGR-210ENST00000494841 IBTKQ9P2D0 1353 aaPredicted RBP9.36□□□□□ -0.91
RPGR-210ENST00000494841 TNRC6CQ9HCJ0 1690 aaKnown RBP9.36□□□□□ -0.91
RPGR-210ENST00000494841 UTYO14607 1347 aa9.35□□□□□ -0.91
RPGR-210ENST00000494841 CDHR2Q9BYE9 1310 aa9.35□□□□□ -0.91
RPGR-210ENST00000494841 UBTFL1P0CB47 393 aaPredicted RBP9.35□□□□□ -0.91
RPGR-210ENST00000494841 KCNA3P22001 575 aa9.35□□□□□ -0.91
RPGR-210ENST00000494841 PDE6BP35913 854 aa9.35□□□□□ -0.91
RPGR-210ENST00000494841 MLLT1Q03111 559 aaPredicted RBP9.35□□□□□ -0.91
RPGR-210ENST00000494841 C10orf71Q711Q0 1435 aa9.35□□□□□ -0.91
RPGR-210ENST00000494841 C1orf127Q8N9H9 656 aa9.35□□□□□ -0.91
RPGR-210ENST00000494841 TTLL11Q8NHH1 800 aa9.35□□□□□ -0.91
RPGR-210ENST00000494841 ZNF622Q969S3 477 aaKnown RBP eCLIP9.35□□□□□ -0.91
RPGR-210ENST00000494841 SYT17Q9BSW7 474 aa9.35□□□□□ -0.91
RPGR-210ENST00000494841 BICC1Q9H694 974 aaKnown RBP9.35□□□□□ -0.91
RPGR-210ENST00000494841 CD2APQ9Y5K6 639 aa9.35□□□□□ -0.91
RPGR-210ENST00000494841 LRRFIP2Q9Y608 721 aaKnown RBP9.35□□□□□ -0.91
RPGR-210ENST00000494841 KIF13BQ9NQT8 1826 aa9.35□□□□□ -0.91
RPGR-210ENST00000494841 KLRG2A4D1S0 409 aaPredicted RBP9.34□□□□□ -0.91
RPGR-210ENST00000494841 H0YIN7 160 aa9.34□□□□□ -0.91
RPGR-210ENST00000494841 GNAI3P08754 354 aa9.34□□□□□ -0.91
RPGR-210ENST00000494841 SRGNP10124 158 aa9.34□□□□□ -0.91
RPGR-210ENST00000494841 COL13A1Q5TAT6 717 aaPredicted RBP9.34□□□□□ -0.91
RPGR-210ENST00000494841 LMBR1LQ6UX01 489 aa9.34□□□□□ -0.91
RPGR-210ENST00000494841 ANKRD44Q8N8A2 993 aa9.34□□□□□ -0.91
RPGR-210ENST00000494841 EXOC6Q8TAG9 804 aa9.34□□□□□ -0.91
RPGR-210ENST00000494841 ALKBH8Q96BT7 664 aaKnown RBP9.34□□□□□ -0.91
RPGR-210ENST00000494841 NSUN5Q96P11 429 aaKnown RBP9.34□□□□□ -0.91
RPGR-210ENST00000494841 SEC31BQ9NQW1 1179 aa9.34□□□□□ -0.91
RPGR-210ENST00000494841 DDX19BQ9UMR2 479 aa9.34□□□□□ -0.91
RPGR-210ENST00000494841 STARD13Q9Y3M8 1113 aa9.34□□□□□ -0.91
RPGR-210ENST00000494841 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.34□□□□□ -0.91
RPGR-210ENST00000494841 MYH3P11055 1940 aa9.34□□□□□ -0.91
RPGR-210ENST00000494841 TREHO43280 583 aa9.33□□□□□ -0.92
RPGR-210ENST00000494841 PHACTR2O75167 634 aa9.33□□□□□ -0.92
RPGR-210ENST00000494841 GNAI2P04899 355 aa9.33□□□□□ -0.92
RPGR-210ENST00000494841 CSF1RP07333 972 aa9.33□□□□□ -0.92
RPGR-210ENST00000494841 CTSWP56202 376 aa9.33□□□□□ -0.92
RPGR-210ENST00000494841 TGFB2P61812 414 aa9.33□□□□□ -0.92
RPGR-210ENST00000494841 SF3B3Q15393 1217 aaKnown RBP9.33□□□□□ -0.92
RPGR-210ENST00000494841 CRY2Q49AN0 593 aa9.33□□□□□ -0.92
RPGR-210ENST00000494841 DNAJC14Q6Y2X3 702 aaPredicted RBP9.33□□□□□ -0.92
RPGR-210ENST00000494841 CHSY3Q70JA7 882 aa9.33□□□□□ -0.92
RPGR-210ENST00000494841 SLC51AQ86UW1 340 aa9.33□□□□□ -0.92
RPGR-210ENST00000494841 ZSCAN29Q8IWY8 852 aaPredicted RBP9.33□□□□□ -0.92
RPGR-210ENST00000494841 RPGRQ92834 1020 aaKnown RBP9.33□□□□□ -0.92
RPGR-210ENST00000494841 BTBD6Q96KE9 485 aa9.33□□□□□ -0.92
RPGR-210ENST00000494841 PLA2G12BQ9BX93 195 aa9.33□□□□□ -0.92
RPGR-210ENST00000494841 NIF3L1Q9GZT8 377 aa9.33□□□□□ -0.92
RPGR-210ENST00000494841 GREM2Q9H772 168 aa9.33□□□□□ -0.92
RPGR-210ENST00000494841 ZBTB40Q9NUA8 1239 aa9.33□□□□□ -0.92
RPGR-210ENST00000494841 KANSL3Q9P2N6 904 aa9.33□□□□□ -0.92
RPGR-210ENST00000494841 CACNA1SQ13698 1873 aa9.33□□□□□ -0.92
RPGR-210ENST00000494841 COL11A2P13942 1736 aaPredicted RBP9.33□□□□□ -0.92
RPGR-210ENST00000494841 KIAA1551Q9HCM1 1747 aa9.33□□□□□ -0.92
RPGR-210ENST00000494841 COL4A1P02462 1669 aa9.32□□□□□ -0.92
RPGR-210ENST00000494841 LRP5O75197 1615 aa9.32□□□□□ -0.92
RPGR-210ENST00000494841 NPR1P16066 1061 aa9.32□□□□□ -0.92
RPGR-210ENST00000494841 ALAS2P22557 587 aa9.32□□□□□ -0.92
RPGR-210ENST00000494841 ORC1Q13415 861 aa9.32□□□□□ -0.92
RPGR-210ENST00000494841 DSC3Q14574 896 aa9.32□□□□□ -0.92
RPGR-210ENST00000494841 PCSK7Q16549 785 aa9.32□□□□□ -0.92
RPGR-210ENST00000494841 TMCO4Q5TGY1 634 aa9.32□□□□□ -0.92
RPGR-210ENST00000494841 CELF1Q92879 486 aaKnown RBP9.32□□□□□ -0.92
RPGR-210ENST00000494841 MASTLQ96GX5 879 aa9.32□□□□□ -0.92
RPGR-210ENST00000494841 SLX4Q8IY92 1834 aa9.31□□□□□ -0.92
RPGR-210ENST00000494841 PHF20L1A8MW92 1017 aa9.31□□□□□ -0.92
RPGR-210ENST00000494841 EREGO14944 169 aa9.31□□□□□ -0.92
RPGR-210ENST00000494841 KIF4AO95239 1232 aa9.31□□□□□ -0.92
RPGR-210ENST00000494841 HSP90B1P14625 803 aaKnown RBP9.31□□□□□ -0.92
RPGR-210ENST00000494841 CES1P23141 567 aa9.31□□□□□ -0.92
RPGR-210ENST00000494841 HOXA10P31260 410 aaPredicted RBP9.31□□□□□ -0.92
RPGR-210ENST00000494841 RABL6Q3YEC7 729 aaPredicted RBP9.31□□□□□ -0.92
RPGR-210ENST00000494841 CCDC152Q4G0S7 254 aa9.31□□□□□ -0.92
RPGR-210ENST00000494841 STYK1Q6J9G0 422 aa9.31□□□□□ -0.92
RPGR-210ENST00000494841 OLFM4Q6UX06 510 aa9.31□□□□□ -0.92
RPGR-210ENST00000494841 HFE2Q6ZVN8 426 aa9.31□□□□□ -0.92
RPGR-210ENST00000494841 DDX46Q7L014 1031 aaKnown RBP9.31□□□□□ -0.92
RPGR-210ENST00000494841 FAM35AQ86V20 835 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms