RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 UIMC1Q96RL1 719 aa11.91□□□□□ -0.5
SAMM50-206ENST00000494795 USP40Q9NVE5 1235 aa11.91□□□□□ -0.5
SAMM50-206ENST00000494795 SCAF8Q9UPN6 1271 aaKnown RBP11.91□□□□□ -0.5
SAMM50-206ENST00000494795 ROBO3Q96MS0 1386 aa11.91□□□□□ -0.5
SAMM50-206ENST00000494795 TRIM75PA6NK02 468 aa11.9□□□□□ -0.5
SAMM50-206ENST00000494795 ACTN4O43707 911 aaKnown RBP11.9□□□□□ -0.5
SAMM50-206ENST00000494795 LDHCP07864 332 aa11.9□□□□□ -0.5
SAMM50-206ENST00000494795 RXRBP28702 533 aa11.9□□□□□ -0.5
SAMM50-206ENST00000494795 NLRP12P59046 1061 aa11.9□□□□□ -0.5
SAMM50-206ENST00000494795 DEFB132Q7Z7B7 95 aa11.9□□□□□ -0.5
SAMM50-206ENST00000494795 DGKHQ86XP1 1220 aa11.9□□□□□ -0.5
SAMM50-206ENST00000494795 SPOCK2Q92563 424 aa11.9□□□□□ -0.5
SAMM50-206ENST00000494795 PLIN2Q99541 437 aa11.9□□□□□ -0.5
SAMM50-206ENST00000494795 TUBE1Q9UJT0 475 aa11.9□□□□□ -0.5
SAMM50-206ENST00000494795 SRPRBQ9Y5M8 271 aaKnown RBP11.9□□□□□ -0.5
SAMM50-206ENST00000494795 LRRC37AA6NMS7 1700 aa11.9□□□□□ -0.5
SAMM50-206ENST00000494795 KLRF2D3W0D1 207 aa11.9□□□□□ -0.5
SAMM50-206ENST00000494795 PCP11498 1178 aaKnown RBP11.9□□□□□ -0.5
SAMM50-206ENST00000494795 GRM4Q14833 912 aa11.9□□□□□ -0.5
SAMM50-206ENST00000494795 AOC3Q16853 763 aa11.9□□□□□ -0.5
SAMM50-206ENST00000494795 TTC38Q5R3I4 469 aa11.9□□□□□ -0.5
SAMM50-206ENST00000494795 XPO4Q9C0E2 1151 aaKnown RBP11.9□□□□□ -0.5
SAMM50-206ENST00000494795 TMEM60Q9H2L4 133 aa11.9□□□□□ -0.5
SAMM50-206ENST00000494795 DNAJC18Q9H819 358 aa11.9□□□□□ -0.5
SAMM50-206ENST00000494795 IFNKQ9P0W0 207 aa11.9□□□□□ -0.5
SAMM50-206ENST00000494795 MYH1P12882 1939 aa11.9□□□□□ -0.5
SAMM50-206ENST00000494795 FAM237AA0A1B0GTK4 181 aa11.9□□□□□ -0.51
SAMM50-206ENST00000494795 CALM1P0DP23 149 aa11.9□□□□□ -0.51
SAMM50-206ENST00000494795 CALM2P0DP24 149 aa11.9□□□□□ -0.51
SAMM50-206ENST00000494795 CALM3P0DP25 149 aa11.9□□□□□ -0.51
SAMM50-206ENST00000494795 TAL1P17542 331 aaPredicted RBP11.9□□□□□ -0.51
SAMM50-206ENST00000494795 KIAA2012Q0VF49 1180 aa11.9□□□□□ -0.51
SAMM50-206ENST00000494795 LRRC15Q8TF66 581 aa11.9□□□□□ -0.51
SAMM50-206ENST00000494795 COA1Q9GZY4 146 aa11.9□□□□□ -0.51
SAMM50-206ENST00000494795 USP27XA6NNY8 438 aa11.89□□□□□ -0.51
SAMM50-206ENST00000494795 INF2Q27J81 1249 aa11.89□□□□□ -0.51
SAMM50-206ENST00000494795 TTBK2Q6IQ55 1244 aa11.89□□□□□ -0.51
SAMM50-206ENST00000494795 JMYQ8N9B5 988 aa11.89□□□□□ -0.51
SAMM50-206ENST00000494795 KIAA1524Q8TCG1 905 aa11.89□□□□□ -0.51
SAMM50-206ENST00000494795 MASTLQ96GX5 879 aa11.89□□□□□ -0.51
SAMM50-206ENST00000494795 PIGSQ96S52 555 aa11.89□□□□□ -0.51
SAMM50-206ENST00000494795 MTRQ99707 1265 aa11.89□□□□□ -0.51
SAMM50-206ENST00000494795 BLZF1Q9H2G9 400 aa11.89□□□□□ -0.51
SAMM50-206ENST00000494795 MAN1B1Q9UKM7 699 aa11.89□□□□□ -0.51
SAMM50-206ENST00000494795 PALM3A6NDB9 673 aaPredicted RBP11.89□□□□□ -0.51
SAMM50-206ENST00000494795 FAM163AQ96GL9 167 aaPredicted RBP11.89□□□□□ -0.51
SAMM50-206ENST00000494795 DDTLA6NHG4 134 aaPredicted RBP11.88□□□□□ -0.51
SAMM50-206ENST00000494795 TMEM232C9JQI7 657 aa11.88□□□□□ -0.51
SAMM50-206ENST00000494795 SLC16A2P36021 539 aa11.88□□□□□ -0.51
SAMM50-206ENST00000494795 ATP2B2Q01814 1243 aa11.88□□□□□ -0.51
SAMM50-206ENST00000494795 ZNF772Q68DY9 489 aaPredicted RBP11.88□□□□□ -0.51
SAMM50-206ENST00000494795 FANCLQ9NW38 375 aa11.88□□□□□ -0.51
SAMM50-206ENST00000494795 TMEM260Q9NX78 707 aa11.88□□□□□ -0.51
SAMM50-206ENST00000494795 PCDHA6Q9UN73 950 aa11.88□□□□□ -0.51
SAMM50-206ENST00000494795 PCDHA8Q9Y5H6 950 aa11.88□□□□□ -0.51
SAMM50-206ENST00000494795 G3V3G9 751 aa11.88□□□□□ -0.51
SAMM50-206ENST00000494795 STXBP3O00186 592 aa11.88□□□□□ -0.51
SAMM50-206ENST00000494795 GABPAQ06546 454 aa11.88□□□□□ -0.51
SAMM50-206ENST00000494795 POSTNQ15063 836 aa11.88□□□□□ -0.51
SAMM50-206ENST00000494795 DCAF8Q5TAQ9 597 aa11.88□□□□□ -0.51
SAMM50-206ENST00000494795 NEDD1Q8NHV4 660 aa11.88□□□□□ -0.51
SAMM50-206ENST00000494795 GJA10Q969M2 543 aa11.88□□□□□ -0.51
SAMM50-206ENST00000494795 COA7Q96BR5 231 aa11.88□□□□□ -0.51
SAMM50-206ENST00000494795 GPCPD1Q9NPB8 672 aa11.88□□□□□ -0.51
SAMM50-206ENST00000494795 NRXN2Q9P2S2 1712 aa11.88□□□□□ -0.51
SAMM50-206ENST00000494795 M0R2N6 131 aa11.88□□□□□ -0.51
SAMM50-206ENST00000494795 C21orf2O43822 256 aa11.88□□□□□ -0.51
SAMM50-206ENST00000494795 RAD21O60216 631 aa11.88□□□□□ -0.51
SAMM50-206ENST00000494795 SMC2O95347 1197 aa11.88□□□□□ -0.51
SAMM50-206ENST00000494795 CD44P16070 742 aaKnown RBP11.88□□□□□ -0.51
SAMM50-206ENST00000494795 RBM5P52756 815 aaKnown RBP eCLIP11.88□□□□□ -0.51
SAMM50-206ENST00000494795 JAG1P78504 1218 aa11.88□□□□□ -0.51
SAMM50-206ENST00000494795 SH3BP5LQ7L8J4 393 aa11.88□□□□□ -0.51
SAMM50-206ENST00000494795 BLIDQ8IZY5 108 aa11.88□□□□□ -0.51
SAMM50-206ENST00000494795 XBP1P17861 261 aa11.87□□□□□ -0.51
SAMM50-206ENST00000494795 SHMT1P34896 483 aa11.87□□□□□ -0.51
SAMM50-206ENST00000494795 PDE6BP35913 854 aa11.87□□□□□ -0.51
SAMM50-206ENST00000494795 DPYDQ12882 1025 aa11.87□□□□□ -0.51
SAMM50-206ENST00000494795 PPP2R5BQ15173 497 aa11.87□□□□□ -0.51
SAMM50-206ENST00000494795 ZRSR1Q15695 479 aaKnown RBP11.87□□□□□ -0.51
SAMM50-206ENST00000494795 C4orf32Q8N8J7 132 aa11.87□□□□□ -0.51
SAMM50-206ENST00000494795 ANKS1AQ92625 1134 aa11.87□□□□□ -0.51
SAMM50-206ENST00000494795 YDJCA8MPS7 323 aa11.87□□□□□ -0.51
SAMM50-206ENST00000494795 ECE2O60344 883 aa11.87□□□□□ -0.51
SAMM50-206ENST00000494795 STX17P56962 302 aa11.87□□□□□ -0.51
SAMM50-206ENST00000494795 SNAP25P60880 206 aa11.87□□□□□ -0.51
SAMM50-206ENST00000494795 TBC1D22AQ8WUA7 517 aa11.87□□□□□ -0.51
SAMM50-206ENST00000494795 TIGD1Q96MW7 591 aa11.87□□□□□ -0.51
SAMM50-206ENST00000494795 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.87□□□□□ -0.51
SAMM50-206ENST00000494795 MPHOSPH10O00566 681 aaKnown RBP11.86□□□□□ -0.51
SAMM50-206ENST00000494795 KIF5BP33176 963 aa11.86□□□□□ -0.51
SAMM50-206ENST00000494795 CRKP46108 304 aa11.86□□□□□ -0.51
SAMM50-206ENST00000494795 DNTTIP2Q5QJE6 756 aaKnown RBP11.86□□□□□ -0.51
SAMM50-206ENST00000494795 SARM1Q6SZW1 724 aa11.86□□□□□ -0.51
SAMM50-206ENST00000494795 KCTD1Q719H9 257 aa11.86□□□□□ -0.51
SAMM50-206ENST00000494795 AMOTL1Q8IY63 956 aa11.86□□□□□ -0.51
SAMM50-206ENST00000494795 INTS13Q9NVM9 706 aa11.86□□□□□ -0.51
SAMM50-206ENST00000494795 PDHBP11177 359 aa11.86□□□□□ -0.51
SAMM50-206ENST00000494795 ALDH1B1P30837 517 aa11.86□□□□□ -0.51
SAMM50-206ENST00000494795 ATP2C1P98194 919 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms