RNA–Protein interactions for RNA: ENST00000494620.1

SCRN1-209, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-209ENST00000494620 PTPRFP10586 1907 aa13.04□□□□□ -0.32
SCRN1-209ENST00000494620 FARP2O94887 1054 aaPredicted RBP13.04□□□□□ -0.32
SCRN1-209ENST00000494620 FGAP02671 866 aa13.04□□□□□ -0.32
SCRN1-209ENST00000494620 FDX1P10109 184 aa13.04□□□□□ -0.32
SCRN1-209ENST00000494620 PCP11498 1178 aaKnown RBP13.04□□□□□ -0.32
SCRN1-209ENST00000494620 FCER1AP12319 257 aa13.04□□□□□ -0.32
SCRN1-209ENST00000494620 ERCC3P19447 782 aa13.04□□□□□ -0.32
SCRN1-209ENST00000494620 FAM47AQ5JRC9 791 aa13.04□□□□□ -0.32
SCRN1-209ENST00000494620 TRIB2Q92519 343 aa13.04□□□□□ -0.32
SCRN1-209ENST00000494620 CEP95Q96GE4 821 aa13.04□□□□□ -0.32
SCRN1-209ENST00000494620 FAM227BQ96M60 508 aa13.04□□□□□ -0.32
SCRN1-209ENST00000494620 SLF1Q9BQI6 1058 aa13.04□□□□□ -0.32
SCRN1-209ENST00000494620 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.04□□□□□ -0.32
SCRN1-209ENST00000494620 RNF41Q9H4P4 317 aaPredicted RBP13.04□□□□□ -0.32
SCRN1-209ENST00000494620 PAK6Q9NQU5 681 aaPredicted RBP13.04□□□□□ -0.32
SCRN1-209ENST00000494620 ANAPC4Q9UJX5 808 aa13.04□□□□□ -0.32
SCRN1-209ENST00000494620 FEM1BQ9UK73 627 aa13.04□□□□□ -0.32
SCRN1-209ENST00000494620 PPP1R9AQ9ULJ8 1098 aa13.04□□□□□ -0.32
SCRN1-209ENST00000494620 STX8Q9UNK0 236 aa13.04□□□□□ -0.32
SCRN1-209ENST00000494620 NAV1Q8NEY1 1877 aa13.04□□□□□ -0.32
SCRN1-209ENST00000494620 LOC285556D6RIA3 1793 aa13.03□□□□□ -0.32
SCRN1-209ENST00000494620 A0A0D9SFI3 127 aa13.03□□□□□ -0.32
SCRN1-209ENST00000494620 VWA5AO00534 786 aa13.03□□□□□ -0.32
SCRN1-209ENST00000494620 NDUFB10O96000 172 aa13.03□□□□□ -0.32
SCRN1-209ENST00000494620 HSPD1P10809 573 aaKnown RBP13.03□□□□□ -0.32
SCRN1-209ENST00000494620 PRKAR2AP13861 404 aaKnown RBP13.03□□□□□ -0.32
SCRN1-209ENST00000494620 IRX6P78412 446 aaPredicted RBP13.03□□□□□ -0.32
SCRN1-209ENST00000494620 CTDSPL2Q05D32 466 aa13.03□□□□□ -0.32
SCRN1-209ENST00000494620 IKQ13123 557 aaPredicted RBP13.03□□□□□ -0.32
SCRN1-209ENST00000494620 KCTD2Q14681 263 aa13.03□□□□□ -0.32
SCRN1-209ENST00000494620 RRP12Q5JTH9 1297 aaKnown RBP13.03□□□□□ -0.32
SCRN1-209ENST00000494620 KIAA1755Q5JYT7 1200 aa13.03□□□□□ -0.32
SCRN1-209ENST00000494620 SLFN13Q68D06 897 aa13.03□□□□□ -0.32
SCRN1-209ENST00000494620 CWC27Q6UX04 472 aaKnown RBP13.03□□□□□ -0.32
SCRN1-209ENST00000494620 MFSD6Q6ZSS7 791 aa13.03□□□□□ -0.32
SCRN1-209ENST00000494620 NECAB2Q7Z6G3 386 aa13.03□□□□□ -0.32
SCRN1-209ENST00000494620 ABRAQ8N0Z2 381 aa13.03□□□□□ -0.32
SCRN1-209ENST00000494620 ANKLE1Q8NAG6 615 aa13.03□□□□□ -0.32
SCRN1-209ENST00000494620 CHURC1Q8WUH1 139 aa13.03□□□□□ -0.32
SCRN1-209ENST00000494620 USP6NLQ92738 828 aa13.03□□□□□ -0.32
SCRN1-209ENST00000494620 CTNNA3Q9UI47 895 aa13.03□□□□□ -0.32
SCRN1-209ENST00000494620 NR2E3Q9Y5X4 410 aa13.03□□□□□ -0.32
SCRN1-209ENST00000494620 CCDC171Q6TFL3 1326 aa13.03□□□□□ -0.32
SCRN1-209ENST00000494620 IGKV6D-41A0A0C4DH26 115 aa13.02□□□□□ -0.33
SCRN1-209ENST00000494620 ZNF213O14771 459 aa13.02□□□□□ -0.33
SCRN1-209ENST00000494620 MSCO60682 206 aa13.02□□□□□ -0.33
SCRN1-209ENST00000494620 HOXC6P09630 235 aa13.02□□□□□ -0.33
SCRN1-209ENST00000494620 BMP3P12645 472 aa13.02□□□□□ -0.33
SCRN1-209ENST00000494620 SLC1A4P43007 532 aa13.02□□□□□ -0.33
SCRN1-209ENST00000494620 NT5C2P49902 561 aa13.02□□□□□ -0.33
SCRN1-209ENST00000494620 GRB14Q14449 540 aa13.02□□□□□ -0.33
SCRN1-209ENST00000494620 VPS53Q5VIR6 699 aa13.02□□□□□ -0.33
SCRN1-209ENST00000494620 POTEEQ6S8J3 1075 aa13.02□□□□□ -0.33
SCRN1-209ENST00000494620 RIOX2Q8IUF8 465 aa13.02□□□□□ -0.33
SCRN1-209ENST00000494620 GMCL1P1Q8NEA9 526 aa13.02□□□□□ -0.33
SCRN1-209ENST00000494620 RUFY2Q8WXA3 655 aa13.02□□□□□ -0.33
SCRN1-209ENST00000494620 MMP19Q99542 508 aa13.02□□□□□ -0.33
SCRN1-209ENST00000494620 ADAMTS5Q9UNA0 930 aa13.02□□□□□ -0.33
SCRN1-209ENST00000494620 ORC4O43929 436 aa13.01□□□□□ -0.33
SCRN1-209ENST00000494620 ADORA2AP29274 412 aa13.01□□□□□ -0.33
SCRN1-209ENST00000494620 CNGA1P29973 690 aa13.01□□□□□ -0.33
SCRN1-209ENST00000494620 SLC4A3P48751 1232 aa13.01□□□□□ -0.33
SCRN1-209ENST00000494620 CACNB2Q08289 660 aaPredicted RBP13.01□□□□□ -0.33
SCRN1-209ENST00000494620 TMEM132BQ14DG7 1078 aa13.01□□□□□ -0.33
SCRN1-209ENST00000494620 CCDC178Q5BJE1 867 aa13.01□□□□□ -0.33
SCRN1-209ENST00000494620 FAM160B2Q86V87 743 aa13.01□□□□□ -0.33
SCRN1-209ENST00000494620 LRRC47Q8N1G4 583 aaKnown RBP13.01□□□□□ -0.33
SCRN1-209ENST00000494620 KIFC2Q96AC6 838 aa13.01□□□□□ -0.33
SCRN1-209ENST00000494620 DDX11Q96FC9 970 aa13.01□□□□□ -0.33
SCRN1-209ENST00000494620 TEX13BQ9BXU2 312 aa13.01□□□□□ -0.33
SCRN1-209ENST00000494620 CRISPLD2Q9H0B8 497 aa13.01□□□□□ -0.33
SCRN1-209ENST00000494620 FBXO28Q9NVF7 368 aa13.01□□□□□ -0.33
SCRN1-209ENST00000494620 MYH7P12883 1935 aa13.01□□□□□ -0.33
SCRN1-209ENST00000494620 BAZ2AQ9UIF9 1905 aaKnown RBP13□□□□□ -0.33
SCRN1-209ENST00000494620 ZMYM6O95789 1325 aa13□□□□□ -0.33
SCRN1-209ENST00000494620 TMEM232C9JQI7 657 aa13□□□□□ -0.33
SCRN1-209ENST00000494620 TRIM32Q13049 653 aa13□□□□□ -0.33
SCRN1-209ENST00000494620 CCL14Q16627 93 aa13□□□□□ -0.33
SCRN1-209ENST00000494620 AKNAD1Q5T1N1 836 aa13□□□□□ -0.33
SCRN1-209ENST00000494620 MAP3K21Q5TCX8 1036 aa13□□□□□ -0.33
SCRN1-209ENST00000494620 OLFML2BQ68BL8 750 aa13□□□□□ -0.33
SCRN1-209ENST00000494620 CPXCR1Q8N123 301 aa13□□□□□ -0.33
SCRN1-209ENST00000494620 STAG1Q8WVM7 1258 aa13□□□□□ -0.33
SCRN1-209ENST00000494620 SHISA4Q96DD7 197 aa13□□□□□ -0.33
SCRN1-209ENST00000494620 TTC14Q96N46 770 aa13□□□□□ -0.33
SCRN1-209ENST00000494620 NUP88Q99567 741 aaPredicted RBP13□□□□□ -0.33
SCRN1-209ENST00000494620 NBPF3Q9H094 633 aa13□□□□□ -0.33
SCRN1-209ENST00000494620 FBXO40Q9UH90 709 aa13□□□□□ -0.33
SCRN1-209ENST00000494620 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13□□□□□ -0.33
SCRN1-209ENST00000494620 FGRP09769 529 aa12.99□□□□□ -0.33
SCRN1-209ENST00000494620 MCCP23508 829 aa12.99□□□□□ -0.33
SCRN1-209ENST00000494620 STAT2P52630 851 aa12.99□□□□□ -0.33
SCRN1-209ENST00000494620 HAND2P61296 217 aa12.99□□□□□ -0.33
SCRN1-209ENST00000494620 IMMTQ16891 758 aaKnown RBP12.99□□□□□ -0.33
SCRN1-209ENST00000494620 SNRNP48Q6IEG0 339 aaKnown RBP12.99□□□□□ -0.33
SCRN1-209ENST00000494620 RCSD1Q6JBY9 416 aa12.99□□□□□ -0.33
SCRN1-209ENST00000494620 ZNF589Q86UQ0 364 aaPredicted RBP12.99□□□□□ -0.33
SCRN1-209ENST00000494620 ESR2Q92731 530 aa12.99□□□□□ -0.33
SCRN1-209ENST00000494620 GMCL1Q96IK5 515 aa12.99□□□□□ -0.33
SCRN1-209ENST00000494620 PAWRQ96IZ0 340 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms