RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 MCM9Q9NXL9 1143 aa14.16□□□□□ -0.14
CSNK1E-212ENST00000494610 COL11A1P12107 1806 aaPredicted RBP14.15□□□□□ -0.14
CSNK1E-212ENST00000494610 KBTBD13C9JR72 458 aa14.15□□□□□ -0.14
CSNK1E-212ENST00000494610 SEPT4O43236 478 aa14.15□□□□□ -0.14
CSNK1E-212ENST00000494610 MSCO60682 206 aa14.15□□□□□ -0.14
CSNK1E-212ENST00000494610 RAB11FIP3O75154 756 aa14.15□□□□□ -0.14
CSNK1E-212ENST00000494610 IGHDP01880 384 aa14.15□□□□□ -0.14
CSNK1E-212ENST00000494610 PGK2P07205 417 aa14.15□□□□□ -0.14
CSNK1E-212ENST00000494610 AKR1B1P15121 316 aa14.15□□□□□ -0.14
CSNK1E-212ENST00000494610 TLE2Q04725 743 aa14.15□□□□□ -0.14
CSNK1E-212ENST00000494610 OLFML2BQ68BL8 750 aa14.15□□□□□ -0.14
CSNK1E-212ENST00000494610 SIRT2Q8IXJ6 389 aa14.15□□□□□ -0.14
CSNK1E-212ENST00000494610 LCORLQ8N3X6 602 aa14.15□□□□□ -0.14
CSNK1E-212ENST00000494610 ARRDC4Q8NCT1 418 aa14.15□□□□□ -0.14
CSNK1E-212ENST00000494610 MAML3Q96JK9 1138 aa14.15□□□□□ -0.14
CSNK1E-212ENST00000494610 DCTPP1Q9H773 170 aa14.15□□□□□ -0.14
CSNK1E-212ENST00000494610 FBXO28Q9NVF7 368 aa14.15□□□□□ -0.14
CSNK1E-212ENST00000494610 XIRP2A4UGR9 3374 aa14.15□□□□□ -0.14
CSNK1E-212ENST00000494610 ZNF236Q9UL36 1845 aa14.15□□□□□ -0.14
CSNK1E-212ENST00000494610 CHD7Q9P2D1 2997 aa14.15□□□□□ -0.14
CSNK1E-212ENST00000494610 PARP14Q460N5 1801 aa14.14□□□□□ -0.15
CSNK1E-212ENST00000494610 APBB1O00213 710 aa14.14□□□□□ -0.15
CSNK1E-212ENST00000494610 PGK1P00558 417 aa14.14□□□□□ -0.15
CSNK1E-212ENST00000494610 PDE6AP16499 860 aa14.14□□□□□ -0.15
CSNK1E-212ENST00000494610 DSG3P32926 999 aa14.14□□□□□ -0.15
CSNK1E-212ENST00000494610 IRX5P78411 483 aaPredicted RBP14.14□□□□□ -0.15
CSNK1E-212ENST00000494610 MAP3K12Q12852 859 aa14.14□□□□□ -0.15
CSNK1E-212ENST00000494610 SNX17Q15036 470 aa14.14□□□□□ -0.15
CSNK1E-212ENST00000494610 SLC9C2Q5TAH2 1124 aa14.14□□□□□ -0.15
CSNK1E-212ENST00000494610 ARMT1Q9H993 441 aa14.14□□□□□ -0.15
CSNK1E-212ENST00000494610 ZNF532Q9HCE3 1301 aa14.14□□□□□ -0.15
CSNK1E-212ENST00000494610 BAZ2AQ9UIF9 1905 aaKnown RBP14.13□□□□□ -0.15
CSNK1E-212ENST00000494610 FLOT1O75955 427 aa14.13□□□□□ -0.15
CSNK1E-212ENST00000494610 TMEM132BQ14DG7 1078 aa14.13□□□□□ -0.15
CSNK1E-212ENST00000494610 USP38Q8NB14 1042 aa14.13□□□□□ -0.15
CSNK1E-212ENST00000494610 DCP1AQ9NPI6 582 aaPredicted RBP14.13□□□□□ -0.15
CSNK1E-212ENST00000494610 PRDM6Q9NQX0 595 aa14.13□□□□□ -0.15
CSNK1E-212ENST00000494610 HOXC10Q9NYD6 342 aa14.13□□□□□ -0.15
CSNK1E-212ENST00000494610 TCRBV5S4A2TA0A5A2 114 aa14.12□□□□□ -0.15
CSNK1E-212ENST00000494610 GOLIM4O00461 696 aa14.12□□□□□ -0.15
CSNK1E-212ENST00000494610 PQBP1O60828 265 aaKnown RBP14.12□□□□□ -0.15
CSNK1E-212ENST00000494610 KIF1BPQ96EK5 621 aa14.12□□□□□ -0.15
CSNK1E-212ENST00000494610 DNAJC2Q99543 621 aaKnown RBP14.12□□□□□ -0.15
CSNK1E-212ENST00000494610 MYH8P13535 1937 aa14.11□□□□□ -0.15
CSNK1E-212ENST00000494610 STRNO43815 780 aa14.11□□□□□ -0.15
CSNK1E-212ENST00000494610 FOSL2P15408 326 aa14.11□□□□□ -0.15
CSNK1E-212ENST00000494610 NUCB1Q02818 461 aa14.11□□□□□ -0.15
CSNK1E-212ENST00000494610 GRIN2CQ14957 1233 aa14.11□□□□□ -0.15
CSNK1E-212ENST00000494610 SHCBP1Q8NEM2 672 aa14.11□□□□□ -0.15
CSNK1E-212ENST00000494610 CRNKL1Q9BZJ0 848 aaKnown RBP14.11□□□□□ -0.15
CSNK1E-212ENST00000494610 LRRCC1Q9C099 1032 aa14.11□□□□□ -0.15
CSNK1E-212ENST00000494610 XPNPEP3Q9NQH7 507 aa14.11□□□□□ -0.15
CSNK1E-212ENST00000494610 PLXNA1Q9UIW2 1896 aa14.11□□□□□ -0.15
CSNK1E-212ENST00000494610 SMAD3P84022 425 aaKnown RBP14.1□□□□□ -0.15
CSNK1E-212ENST00000494610 CHD1LQ86WJ1 897 aa14.1□□□□□ -0.15
CSNK1E-212ENST00000494610 RNPC3Q96LT9 517 aaKnown RBP14.1□□□□□ -0.15
CSNK1E-212ENST00000494610 MROH8Q9H579 483 aa14.1□□□□□ -0.15
CSNK1E-212ENST00000494610 RAPGEFL1Q9UHV5 662 aa14.1□□□□□ -0.15
CSNK1E-212ENST00000494610 PHF24Q9UPV7 400 aa14.1□□□□□ -0.15
CSNK1E-212ENST00000494610 A0A1W2PQ45 241 aaPredicted RBP14.09□□□□□ -0.15
CSNK1E-212ENST00000494610 A0A1W2PQY0 241 aa14.09□□□□□ -0.15
CSNK1E-212ENST00000494610 MYADML2A6NDP7 307 aa14.09□□□□□ -0.15
CSNK1E-212ENST00000494610 GRXCR1A8MXD5 290 aa14.09□□□□□ -0.15
CSNK1E-212ENST00000494610 RAD21O60216 631 aa14.09□□□□□ -0.15
CSNK1E-212ENST00000494610 MBD4O95243 580 aa14.09□□□□□ -0.15
CSNK1E-212ENST00000494610 CLTBP09497 229 aa14.09□□□□□ -0.15
CSNK1E-212ENST00000494610 ZNF865P0CJ78 1059 aaPredicted RBP14.09□□□□□ -0.15
CSNK1E-212ENST00000494610 FCER1AP12319 257 aa14.09□□□□□ -0.15
CSNK1E-212ENST00000494610 ICA1Q05084 483 aa14.09□□□□□ -0.15
CSNK1E-212ENST00000494610 ANKRD45Q5TZF3 282 aa14.09□□□□□ -0.15
CSNK1E-212ENST00000494610 TMEM179Q6ZVK1 233 aa14.09□□□□□ -0.15
CSNK1E-212ENST00000494610 STK11IPQ8N1F8 1099 aa14.09□□□□□ -0.15
CSNK1E-212ENST00000494610 MMP19Q99542 508 aa14.09□□□□□ -0.15
CSNK1E-212ENST00000494610 NUP88Q99567 741 aaPredicted RBP14.09□□□□□ -0.15
CSNK1E-212ENST00000494610 VCPKMTQ9H867 229 aa14.09□□□□□ -0.15
CSNK1E-212ENST00000494610 TMX2Q9Y320 296 aa14.09□□□□□ -0.15
CSNK1E-212ENST00000494610 BDP1A6H8Y1 2624 aa14.08□□□□□ -0.16
CSNK1E-212ENST00000494610 RARBP10826 455 aa14.08□□□□□ -0.16
CSNK1E-212ENST00000494610 EEF2P13639 858 aaKnown RBP14.08□□□□□ -0.16
CSNK1E-212ENST00000494610 CDK8P49336 464 aa14.08□□□□□ -0.16
CSNK1E-212ENST00000494610 FAAP100Q0VG06 881 aa14.08□□□□□ -0.16
CSNK1E-212ENST00000494610 ZNF792Q3KQV3 632 aa14.08□□□□□ -0.16
CSNK1E-212ENST00000494610 CERS3Q8IU89 383 aa14.08□□□□□ -0.16
CSNK1E-212ENST00000494610 RHPN1Q8TCX5 695 aa14.08□□□□□ -0.16
CSNK1E-212ENST00000494610 PPM1EQ8WY54 764 aa14.08□□□□□ -0.16
CSNK1E-212ENST00000494610 TINF2Q9BSI4 451 aa14.08□□□□□ -0.16
CSNK1E-212ENST00000494610 MYO9BQ13459 2157 aa14.07□□□□□ -0.16
CSNK1E-212ENST00000494610 ADCY6O43306 1168 aa14.07□□□□□ -0.16
CSNK1E-212ENST00000494610 IGSF3O75054 1194 aa14.07□□□□□ -0.16
CSNK1E-212ENST00000494610 ADAMTS4O75173 837 aa14.07□□□□□ -0.16
CSNK1E-212ENST00000494610 RAG1P15918 1043 aa14.07□□□□□ -0.16
CSNK1E-212ENST00000494610 PBX2P40425 430 aa14.07□□□□□ -0.16
CSNK1E-212ENST00000494610 SLC4A3P48751 1232 aa14.07□□□□□ -0.16
CSNK1E-212ENST00000494610 FAM83BQ5T0W9 1011 aa14.07□□□□□ -0.16
CSNK1E-212ENST00000494610 C1orf53Q5VUE5 145 aa14.07□□□□□ -0.16
CSNK1E-212ENST00000494610 C16orf59Q7L2K0 433 aa14.07□□□□□ -0.16
CSNK1E-212ENST00000494610 ABRAQ8N0Z2 381 aa14.07□□□□□ -0.16
CSNK1E-212ENST00000494610 CLASRPQ8N2M8 674 aaKnown RBP14.07□□□□□ -0.16
CSNK1E-212ENST00000494610 REPS2Q8NFH8 660 aa14.07□□□□□ -0.16
CSNK1E-212ENST00000494610 BOLA2Q9H3K6 86 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms