RNA–Protein interactions for RNA: ENST00000494502.6

PDCD10-217, Transcript of programmed cell death 10, humanhuman

TSL 5

Gene PDCD10, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-217ENST00000494502 PRAMEF22A3QJZ6 481 aa11.92□□□□□ -0.5
PDCD10-217ENST00000494502 SHISA8B8ZZ34 492 aa11.92□□□□□ -0.5
PDCD10-217ENST00000494502 FZD9O00144 591 aa11.92□□□□□ -0.5
PDCD10-217ENST00000494502 WIPF1O43516 503 aa11.92□□□□□ -0.5
PDCD10-217ENST00000494502 GADD45BO75293 160 aaPredicted RBP11.92□□□□□ -0.5
PDCD10-217ENST00000494502 PSMD2Q13200 908 aa11.92□□□□□ -0.5
PDCD10-217ENST00000494502 DEFB115Q30KQ5 88 aa11.92□□□□□ -0.5
PDCD10-217ENST00000494502 ELMSAN1Q6PJG2 1045 aa11.92□□□□□ -0.5
PDCD10-217ENST00000494502 CLEC4GQ6UXB4 293 aa11.92□□□□□ -0.5
PDCD10-217ENST00000494502 C20orf204Q6ZNR8 217 aa11.92□□□□□ -0.5
PDCD10-217ENST00000494502 PNMA8AQ86V59 439 aaPredicted RBP11.92□□□□□ -0.5
PDCD10-217ENST00000494502 CNTROBQ8N137 903 aa11.92□□□□□ -0.5
PDCD10-217ENST00000494502 TMEM102Q8N9M5 508 aaPredicted RBP11.92□□□□□ -0.5
PDCD10-217ENST00000494502 GLIS3Q8NEA6 775 aa11.92□□□□□ -0.5
PDCD10-217ENST00000494502 PLD4Q96BZ4 506 aa11.92□□□□□ -0.5
PDCD10-217ENST00000494502 HHIPQ96QV1 700 aa11.92□□□□□ -0.5
PDCD10-217ENST00000494502 TCF12Q99081 682 aa11.92□□□□□ -0.5
PDCD10-217ENST00000494502 BHLHE41Q9C0J9 482 aaPredicted RBP11.92□□□□□ -0.5
PDCD10-217ENST00000494502 KIAA1522Q9P206 1035 aaPredicted RBP11.92□□□□□ -0.5
PDCD10-217ENST00000494502 USP16Q9Y5T5 823 aa11.92□□□□□ -0.5
PDCD10-217ENST00000494502 KIF7Q2M1P5 1343 aa11.91□□□□□ -0.5
PDCD10-217ENST00000494502 WDR33Q9C0J8 1336 aaKnown RBP11.91□□□□□ -0.5
PDCD10-217ENST00000494502 BTBD11A6QL63 1104 aa11.91□□□□□ -0.5
PDCD10-217ENST00000494502 U2SURPO15042 1029 aaKnown RBP11.91□□□□□ -0.5
PDCD10-217ENST00000494502 TRPA1O75762 1119 aa11.91□□□□□ -0.5
PDCD10-217ENST00000494502 VAMP1P23763 118 aa11.91□□□□□ -0.5
PDCD10-217ENST00000494502 IARSP41252 1262 aaKnown RBP11.91□□□□□ -0.5
PDCD10-217ENST00000494502 CC2D1BQ5T0F9 858 aaKnown RBP11.91□□□□□ -0.5
PDCD10-217ENST00000494502 ZNF385CQ66K41 422 aaPredicted RBP11.91□□□□□ -0.5
PDCD10-217ENST00000494502 PSAPL1Q6NUJ1 521 aa11.91□□□□□ -0.5
PDCD10-217ENST00000494502 KANK3Q6NY19 840 aa11.91□□□□□ -0.5
PDCD10-217ENST00000494502 CCNJLQ8IV13 435 aa11.91□□□□□ -0.5
PDCD10-217ENST00000494502 RTKN2Q8IZC4 609 aa11.91□□□□□ -0.5
PDCD10-217ENST00000494502 TTC9Q92623 222 aa11.91□□□□□ -0.5
PDCD10-217ENST00000494502 MRRFQ96E11 262 aaKnown RBP11.91□□□□□ -0.5
PDCD10-217ENST00000494502 BCO2Q9BYV7 579 aa11.91□□□□□ -0.5
PDCD10-217ENST00000494502 EHD4Q9H223 541 aa11.91□□□□□ -0.5
PDCD10-217ENST00000494502 C12orf49Q9H741 205 aa11.91□□□□□ -0.5
PDCD10-217ENST00000494502 ZNF652Q9Y2D9 606 aa11.91□□□□□ -0.5
PDCD10-217ENST00000494502 AK5Q9Y6K8 562 aa11.91□□□□□ -0.5
PDCD10-217ENST00000494502 NUP98P52948 1817 aa11.9□□□□□ -0.5
PDCD10-217ENST00000494502 MAP2K1Q02750 393 aaPredicted RBP11.9□□□□□ -0.5
PDCD10-217ENST00000494502 CHSY3Q70JA7 882 aa11.9□□□□□ -0.5
PDCD10-217ENST00000494502 GPC2Q8N158 579 aa11.9□□□□□ -0.5
PDCD10-217ENST00000494502 BTBD6Q96KE9 485 aa11.9□□□□□ -0.5
PDCD10-217ENST00000494502 SRCIN1Q9C0H9 1055 aa11.9□□□□□ -0.5
PDCD10-217ENST00000494502 SMG9Q9H0W8 520 aaKnown RBP11.9□□□□□ -0.5
PDCD10-217ENST00000494502 LIN7BQ9HAP6 207 aa11.9□□□□□ -0.5
PDCD10-217ENST00000494502 ABT1Q9ULW3 272 aaKnown RBP11.9□□□□□ -0.5
PDCD10-217ENST00000494502 NIP7Q9Y221 180 aaKnown RBP eCLIP11.9□□□□□ -0.5
PDCD10-217ENST00000494502 ABCC12Q96J65 1359 aa11.9□□□□□ -0.5
PDCD10-217ENST00000494502 TNRC18O15417 2968 aaPredicted RBP11.89□□□□□ -0.51
PDCD10-217ENST00000494502 ALBP02768 609 aa11.89□□□□□ -0.51
PDCD10-217ENST00000494502 NXPE4Q6UWF7 544 aa11.89□□□□□ -0.51
PDCD10-217ENST00000494502 SYNE4Q8N205 404 aa11.89□□□□□ -0.51
PDCD10-217ENST00000494502 NXPE3Q969Y0 559 aa11.89□□□□□ -0.51
PDCD10-217ENST00000494502 DDX21Q9NR30 783 aaKnown RBP eCLIP11.89□□□□□ -0.51
PDCD10-217ENST00000494502 FAM177BA6PVY3 158 aa11.88□□□□□ -0.51
PDCD10-217ENST00000494502 PDE2AO00408 941 aaPredicted RBP11.88□□□□□ -0.51
PDCD10-217ENST00000494502 SORBS3O60504 671 aa11.88□□□□□ -0.51
PDCD10-217ENST00000494502 TPTE2Q6XPS3 522 aa11.88□□□□□ -0.51
PDCD10-217ENST00000494502 PHACTR3Q96KR7 559 aa11.88□□□□□ -0.51
PDCD10-217ENST00000494502 PSMD1Q99460 953 aa11.88□□□□□ -0.51
PDCD10-217ENST00000494502 POP1Q99575 1024 aaKnown RBP11.88□□□□□ -0.51
PDCD10-217ENST00000494502 ABCB6Q9NP58 842 aa11.88□□□□□ -0.51
PDCD10-217ENST00000494502 SMNDC1O75940 238 aaKnown RBP eCLIP11.87□□□□□ -0.51
PDCD10-217ENST00000494502 SNRPA1P09661 255 aaKnown RBP11.87□□□□□ -0.51
PDCD10-217ENST00000494502 EIF4BP23588 611 aaKnown RBP11.87□□□□□ -0.51
PDCD10-217ENST00000494502 PRKAR2BP31323 418 aa11.87□□□□□ -0.51
PDCD10-217ENST00000494502 HLFQ16534 295 aa11.87□□□□□ -0.51
PDCD10-217ENST00000494502 CRY2Q49AN0 593 aa11.87□□□□□ -0.51
PDCD10-217ENST00000494502 CEP135Q66GS9 1140 aa11.87□□□□□ -0.51
PDCD10-217ENST00000494502 MICALL1Q8N3F8 863 aa11.87□□□□□ -0.51
PDCD10-217ENST00000494502 CAPNS2Q96L46 248 aa11.87□□□□□ -0.51
PDCD10-217ENST00000494502 PCGF6Q9BYE7 350 aa11.87□□□□□ -0.51
PDCD10-217ENST00000494502 BCL11AQ9H165 835 aa11.87□□□□□ -0.51
PDCD10-217ENST00000494502 MRS2Q9HD23 443 aa11.87□□□□□ -0.51
PDCD10-217ENST00000494502 NPC1L1Q9UHC9 1359 aa11.87□□□□□ -0.51
PDCD10-217ENST00000494502 KDM3BQ7LBC6 1761 aa11.87□□□□□ -0.51
PDCD10-217ENST00000494502 RIC1Q4ADV7 1423 aa11.86□□□□□ -0.51
PDCD10-217ENST00000494502 RGS9O75916 674 aaPredicted RBP11.86□□□□□ -0.51
PDCD10-217ENST00000494502 ALDH1B1P30837 517 aa11.86□□□□□ -0.51
PDCD10-217ENST00000494502 GRIK5Q16478 980 aa11.86□□□□□ -0.51
PDCD10-217ENST00000494502 CYP4F22Q6NT55 531 aa11.86□□□□□ -0.51
PDCD10-217ENST00000494502 ADAMTSL4Q6UY14 1074 aa11.86□□□□□ -0.51
PDCD10-217ENST00000494502 SLC51AQ86UW1 340 aa11.86□□□□□ -0.51
PDCD10-217ENST00000494502 NUDT8Q8WV74 236 aa11.86□□□□□ -0.51
PDCD10-217ENST00000494502 JDP2Q8WYK2 163 aa11.86□□□□□ -0.51
PDCD10-217ENST00000494502 PRDM6Q9NQX0 595 aa11.86□□□□□ -0.51
PDCD10-217ENST00000494502 FAM8A1Q9UBU6 413 aa11.86□□□□□ -0.51
PDCD10-217ENST00000494502 TRIM33Q9UPN9 1127 aa11.86□□□□□ -0.51
PDCD10-217ENST00000494502 LORP23490 312 aaPredicted RBP11.85□□□□□ -0.51
PDCD10-217ENST00000494502 EPS15P42566 896 aa11.85□□□□□ -0.51
PDCD10-217ENST00000494502 ECE1P42892 770 aa11.85□□□□□ -0.51
PDCD10-217ENST00000494502 GRIA4P48058 902 aa11.85□□□□□ -0.51
PDCD10-217ENST00000494502 EIF6P56537 245 aaKnown RBP11.85□□□□□ -0.51
PDCD10-217ENST00000494502 GRM1Q13255 1194 aa11.85□□□□□ -0.51
PDCD10-217ENST00000494502 MCM10Q7L590 875 aa11.85□□□□□ -0.51
PDCD10-217ENST00000494502 DLG5Q8TDM6 1919 aa11.85□□□□□ -0.51
PDCD10-217ENST00000494502 CASP8AP2Q9UKL3 1982 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms