RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 CRIM1Q9NZV1 1036 aa5.72□□□□□ -1.49
CMSS1-207ENST00000494412 SYNGAP1Q96PV0 1343 aa5.72□□□□□ -1.49
CMSS1-207ENST00000494412 GSG1L2A8MUP6 293 aa5.71□□□□□ -1.5
CMSS1-207ENST00000494412 PRODHO43272 600 aa5.71□□□□□ -1.5
CMSS1-207ENST00000494412 GLB1P16278 677 aa5.71□□□□□ -1.5
CMSS1-207ENST00000494412 SDSP20132 328 aa5.71□□□□□ -1.5
CMSS1-207ENST00000494412 NTF4P34130 210 aa5.71□□□□□ -1.5
CMSS1-207ENST00000494412 SUMO1P63165 101 aaKnown RBP5.71□□□□□ -1.5
CMSS1-207ENST00000494412 TTLL4Q14679 1199 aa5.71□□□□□ -1.5
CMSS1-207ENST00000494412 PRAMEF13Q5VWM6 474 aa5.71□□□□□ -1.5
CMSS1-207ENST00000494412 WWC2Q6AWC2 1192 aa5.71□□□□□ -1.5
CMSS1-207ENST00000494412 NSMFQ6X4W1 530 aa5.71□□□□□ -1.5
CMSS1-207ENST00000494412 UBE3DQ7Z6J8 389 aa5.71□□□□□ -1.5
CMSS1-207ENST00000494412 RNF180Q86T96 592 aa5.71□□□□□ -1.5
CMSS1-207ENST00000494412 LRRTM3Q86VH5 581 aa5.71□□□□□ -1.5
CMSS1-207ENST00000494412 KCT2Q8NC54 265 aa5.71□□□□□ -1.5
CMSS1-207ENST00000494412 ATL2Q8NHH9 583 aa5.71□□□□□ -1.5
CMSS1-207ENST00000494412 XAGE3Q8WTP9 111 aa5.71□□□□□ -1.5
CMSS1-207ENST00000494412 CYB5D2Q8WUJ1 264 aa5.71□□□□□ -1.5
CMSS1-207ENST00000494412 TARS2Q9BW92 718 aaKnown RBP5.71□□□□□ -1.5
CMSS1-207ENST00000494412 SSBP4Q9BWG4 385 aaPredicted RBP5.71□□□□□ -1.5
CMSS1-207ENST00000494412 MRPL4Q9BYD3 311 aaKnown RBP5.71□□□□□ -1.5
CMSS1-207ENST00000494412 MKRN2Q9H000 416 aaKnown RBP5.71□□□□□ -1.5
CMSS1-207ENST00000494412 KLHL25Q9H0H3 589 aa5.71□□□□□ -1.5
CMSS1-207ENST00000494412 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.71□□□□□ -1.5
CMSS1-207ENST00000494412 GBP3Q9H0R5 595 aa5.71□□□□□ -1.5
CMSS1-207ENST00000494412 ATXN3LQ9H3M9 355 aa5.71□□□□□ -1.5
CMSS1-207ENST00000494412 MAPRE3Q9UPY8 281 aa5.71□□□□□ -1.5
CMSS1-207ENST00000494412 ALG1L2C9J202 215 aa5.7□□□□□ -1.5
CMSS1-207ENST00000494412 CBFA2T2O43439 604 aa5.7□□□□□ -1.5
CMSS1-207ENST00000494412 RNGTTO60942 597 aaKnown RBP5.7□□□□□ -1.5
CMSS1-207ENST00000494412 NEFMP07197 916 aa5.7□□□□□ -1.5
CMSS1-207ENST00000494412 PABPC1P11940 636 aaKnown RBP5.7□□□□□ -1.5
CMSS1-207ENST00000494412 GRIA2P42262 883 aa5.7□□□□□ -1.5
CMSS1-207ENST00000494412 EXOSC10Q01780 885 aaKnown RBP5.7□□□□□ -1.5
CMSS1-207ENST00000494412 SLBPQ14493 270 aaKnown RBP eCLIP5.7□□□□□ -1.5
CMSS1-207ENST00000494412 TP53INP1Q96A56 240 aa5.7□□□□□ -1.5
CMSS1-207ENST00000494412 UBL7Q96S82 380 aaPredicted RBP5.7□□□□□ -1.5
CMSS1-207ENST00000494412 PIDD1Q9HB75 910 aa5.7□□□□□ -1.5
CMSS1-207ENST00000494412 SSU72Q9NP77 194 aaKnown RBP5.7□□□□□ -1.5
CMSS1-207ENST00000494412 MAGEC2Q9UBF1 373 aaPredicted RBP5.7□□□□□ -1.5
CMSS1-207ENST00000494412 SFMBT1Q9UHJ3 866 aa5.7□□□□□ -1.5
CMSS1-207ENST00000494412 TCEAL9Q9UHQ7 104 aa5.7□□□□□ -1.5
CMSS1-207ENST00000494412 THRAP3Q9Y2W1 955 aaKnown RBP5.7□□□□□ -1.5
CMSS1-207ENST00000494412 NOP56O00567 594 aaKnown RBP5.69□□□□□ -1.5
CMSS1-207ENST00000494412 TBX1O43435 398 aa5.69□□□□□ -1.5
CMSS1-207ENST00000494412 PPM1BO75688 479 aa5.69□□□□□ -1.5
CMSS1-207ENST00000494412 CST3P01034 146 aaPredicted RBP5.69□□□□□ -1.5
CMSS1-207ENST00000494412 FGFR1P11362 822 aa5.69□□□□□ -1.5
CMSS1-207ENST00000494412 PMLP29590 882 aa5.69□□□□□ -1.5
CMSS1-207ENST00000494412 MAP7Q14244 749 aa5.69□□□□□ -1.5
CMSS1-207ENST00000494412 NUTM2GQ5VZR2 741 aa5.69□□□□□ -1.5
CMSS1-207ENST00000494412 Q6ZS46 218 aa5.69□□□□□ -1.5
CMSS1-207ENST00000494412 DYMQ7RTS9 669 aa5.69□□□□□ -1.5
CMSS1-207ENST00000494412 DZIP1LQ8IYY4 767 aaKnown RBP5.69□□□□□ -1.5
CMSS1-207ENST00000494412 ADCY4Q8NFM4 1077 aa5.69□□□□□ -1.5
CMSS1-207ENST00000494412 LEO1Q8WVC0 666 aaPredicted RBP5.69□□□□□ -1.5
CMSS1-207ENST00000494412 ISL2Q96A47 359 aa5.69□□□□□ -1.5
CMSS1-207ENST00000494412 CCDC136Q96JN2 1154 aa5.69□□□□□ -1.5
CMSS1-207ENST00000494412 TMPRSS13Q9BYE2 586 aa5.69□□□□□ -1.5
CMSS1-207ENST00000494412 SLC52A1Q9NWF4 448 aa5.69□□□□□ -1.5
CMSS1-207ENST00000494412 NDOR1Q9UHB4 597 aa5.69□□□□□ -1.5
CMSS1-207ENST00000494412 ZNF451Q9Y4E5 1061 aa5.69□□□□□ -1.5
CMSS1-207ENST00000494412 EID1Q9Y6B2 187 aa5.69□□□□□ -1.5
CMSS1-207ENST00000494412 DNAJC25-GNG10A0A024R161 153 aa5.68□□□□□ -1.5
CMSS1-207ENST00000494412 ADH5P11766 374 aa5.68□□□□□ -1.5
CMSS1-207ENST00000494412 RSPO4Q2I0M5 234 aaPredicted RBP5.68□□□□□ -1.5
CMSS1-207ENST00000494412 NKAPLQ5M9Q1 402 aa5.68□□□□□ -1.5
CMSS1-207ENST00000494412 RAVER1Q8IY67 606 aaKnown RBP5.68□□□□□ -1.5
CMSS1-207ENST00000494412 C7orf61Q8IZ16 206 aa5.68□□□□□ -1.5
CMSS1-207ENST00000494412 AFAP1L2Q8N4X5 818 aa5.68□□□□□ -1.5
CMSS1-207ENST00000494412 ZNF513Q8N8E2 541 aaPredicted RBP5.68□□□□□ -1.5
CMSS1-207ENST00000494412 BVESQ8NE79 360 aa5.68□□□□□ -1.5
CMSS1-207ENST00000494412 OSBP2Q969R2 916 aa5.68□□□□□ -1.5
CMSS1-207ENST00000494412 FOXQ1Q9C009 403 aa5.68□□□□□ -1.5
CMSS1-207ENST00000494412 RNF208Q9H0X6 261 aa5.68□□□□□ -1.5
CMSS1-207ENST00000494412 CYP4F12Q9HCS2 524 aa5.68□□□□□ -1.5
CMSS1-207ENST00000494412 INTS7Q9NVH2 962 aaKnown RBP5.68□□□□□ -1.5
CMSS1-207ENST00000494412 WHRNQ9P202 907 aa5.68□□□□□ -1.5
CMSS1-207ENST00000494412 GABBR1Q9UBS5 961 aa5.68□□□□□ -1.5
CMSS1-207ENST00000494412 DNAJC8O75937 253 aaPredicted RBP5.67□□□□□ -1.5
CMSS1-207ENST00000494412 MAP4K4O95819 1239 aaPredicted RBP5.67□□□□□ -1.5
CMSS1-207ENST00000494412 ITGA4P13612 1032 aa5.67□□□□□ -1.5
CMSS1-207ENST00000494412 DRD2P14416 443 aa5.67□□□□□ -1.5
CMSS1-207ENST00000494412 CPEP16870 476 aa5.67□□□□□ -1.5
CMSS1-207ENST00000494412 CD247P20963 164 aa5.67□□□□□ -1.5
CMSS1-207ENST00000494412 CAP2P40123 477 aa5.67□□□□□ -1.5
CMSS1-207ENST00000494412 ASPAP45381 313 aa5.67□□□□□ -1.5
CMSS1-207ENST00000494412 PREPP48147 710 aa5.67□□□□□ -1.5
CMSS1-207ENST00000494412 GUCY2FP51841 1108 aa5.67□□□□□ -1.5
CMSS1-207ENST00000494412 STRN3Q13033 797 aa5.67□□□□□ -1.5
CMSS1-207ENST00000494412 DDX46Q7L014 1031 aaKnown RBP5.67□□□□□ -1.5
CMSS1-207ENST00000494412 BRAPQ7Z569 592 aa5.67□□□□□ -1.5
CMSS1-207ENST00000494412 STRA8Q7Z7C7 330 aa5.67□□□□□ -1.5
CMSS1-207ENST00000494412 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.67□□□□□ -1.5
CMSS1-207ENST00000494412 PPM1KQ8N3J5 372 aa5.67□□□□□ -1.5
CMSS1-207ENST00000494412 RIN3Q8TB24 985 aa5.67□□□□□ -1.5
CMSS1-207ENST00000494412 SLC7A14Q8TBB6 771 aa5.67□□□□□ -1.5
CMSS1-207ENST00000494412 BTN2A2Q8WVV5 523 aa5.67□□□□□ -1.5
CMSS1-207ENST00000494412 DDX1Q92499 740 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms