RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 DDX12PQ92771 950 aa12.99□□□□□ -0.33
COL25A1-204ENST00000494183 IQCGQ9H095 443 aaKnown RBP12.99□□□□□ -0.33
COL25A1-204ENST00000494183 PIH1D3Q9NQM4 214 aaKnown RBP12.99□□□□□ -0.33
COL25A1-204ENST00000494183 KCNQ2O43526 872 aa12.99□□□□□ -0.33
COL25A1-204ENST00000494183 CD19P15391 556 aa12.99□□□□□ -0.33
COL25A1-204ENST00000494183 MTX1Q13505 466 aa12.99□□□□□ -0.33
COL25A1-204ENST00000494183 RASGRP4Q8TDF6 673 aa12.99□□□□□ -0.33
COL25A1-204ENST00000494183 XPO4Q9C0E2 1151 aaKnown RBP12.99□□□□□ -0.33
COL25A1-204ENST00000494183 MTUS1Q9ULD2 1270 aa12.99□□□□□ -0.33
COL25A1-204ENST00000494183 CCPG1Q9ULG6 757 aa12.99□□□□□ -0.33
COL25A1-204ENST00000494183 CLIC4Q9Y696 253 aa12.99□□□□□ -0.33
COL25A1-204ENST00000494183 AFF2P51816 1311 aa12.99□□□□□ -0.33
COL25A1-204ENST00000494183 TET3O43151 1660 aa12.99□□□□□ -0.33
COL25A1-204ENST00000494183 DYNLL2Q96FJ2 89 aa12.98□□□□□ -0.33
COL25A1-204ENST00000494183 PAIP2Q9BPZ3 127 aaKnown RBP12.98□□□□□ -0.33
COL25A1-204ENST00000494183 NUP58Q9BVL2 599 aa12.98□□□□□ -0.33
COL25A1-204ENST00000494183 RNF26Q9BY78 433 aaPredicted RBP12.98□□□□□ -0.33
COL25A1-204ENST00000494183 RGS12O14924 1447 aa12.98□□□□□ -0.33
COL25A1-204ENST00000494183 SLC8A3P57103 927 aa12.98□□□□□ -0.33
COL25A1-204ENST00000494183 GALNT17Q6IS24 598 aa12.98□□□□□ -0.33
COL25A1-204ENST00000494183 KCTD1Q719H9 257 aa12.98□□□□□ -0.33
COL25A1-204ENST00000494183 PLA2G4DQ86XP0 818 aa12.98□□□□□ -0.33
COL25A1-204ENST00000494183 TSNARE1Q96NA8 513 aa12.98□□□□□ -0.33
COL25A1-204ENST00000494183 KRT19P08727 400 aa12.98□□□□□ -0.33
COL25A1-204ENST00000494183 SLC16A2P36021 539 aa12.98□□□□□ -0.33
COL25A1-204ENST00000494183 KLHL30Q0D2K2 578 aa12.98□□□□□ -0.33
COL25A1-204ENST00000494183 ASIC2Q16515 512 aa12.98□□□□□ -0.33
COL25A1-204ENST00000494183 LONRF3Q496Y0 759 aa12.98□□□□□ -0.33
COL25A1-204ENST00000494183 OTUD6AQ7L8S5 288 aa12.98□□□□□ -0.33
COL25A1-204ENST00000494183 C17orf53Q8N3J3 647 aaPredicted RBP12.98□□□□□ -0.33
COL25A1-204ENST00000494183 NSUN7Q8NE18 718 aaKnown RBP12.98□□□□□ -0.33
COL25A1-204ENST00000494183 PI4K2BQ8TCG2 481 aa12.98□□□□□ -0.33
COL25A1-204ENST00000494183 KANSL2Q9H9L4 492 aa12.98□□□□□ -0.33
COL25A1-204ENST00000494183 TTLL1O95922 423 aa12.98□□□□□ -0.33
COL25A1-204ENST00000494183 TNNI1P19237 187 aa12.98□□□□□ -0.33
COL25A1-204ENST00000494183 MCAMP43121 646 aa12.98□□□□□ -0.33
COL25A1-204ENST00000494183 TNNC1P63316 161 aa12.98□□□□□ -0.33
COL25A1-204ENST00000494183 MECOMQ03112 1051 aa12.98□□□□□ -0.33
COL25A1-204ENST00000494183 TMTC1Q8IUR5 882 aa12.98□□□□□ -0.33
COL25A1-204ENST00000494183 BEGAINQ9BUH8 593 aa12.98□□□□□ -0.33
COL25A1-204ENST00000494183 DDX25Q9UHL0 483 aaKnown RBP12.98□□□□□ -0.33
COL25A1-204ENST00000494183 NARFQ9UHQ1 456 aa12.98□□□□□ -0.33
COL25A1-204ENST00000494183 ATP10DQ9P241 1426 aa12.97□□□□□ -0.33
COL25A1-204ENST00000494183 NDUFA8P51970 172 aa12.97□□□□□ -0.33
COL25A1-204ENST00000494183 PPP1R7Q15435 360 aa12.97□□□□□ -0.33
COL25A1-204ENST00000494183 MCTP2Q6DN12 878 aa12.97□□□□□ -0.33
COL25A1-204ENST00000494183 KRT222Q8N1A0 295 aa12.97□□□□□ -0.33
COL25A1-204ENST00000494183 LARSQ9P2J5 1176 aaKnown RBP12.97□□□□□ -0.33
COL25A1-204ENST00000494183 KDM3AQ9Y4C1 1321 aa12.97□□□□□ -0.33
COL25A1-204ENST00000494183 CALCOCO2Q13137 446 aa12.97□□□□□ -0.33
COL25A1-204ENST00000494183 SLFNL1Q499Z3 407 aa12.97□□□□□ -0.33
COL25A1-204ENST00000494183 XKR9Q5GH70 373 aa12.97□□□□□ -0.33
COL25A1-204ENST00000494183 NCAPG2Q86XI2 1143 aa12.97□□□□□ -0.33
COL25A1-204ENST00000494183 CDAN1Q8IWY9 1227 aa12.97□□□□□ -0.33
COL25A1-204ENST00000494183 MYOCDQ8IZQ8 938 aa12.97□□□□□ -0.33
COL25A1-204ENST00000494183 METTL13Q8N6R0 699 aa12.97□□□□□ -0.33
COL25A1-204ENST00000494183 TRERF1Q96PN7 1200 aa12.97□□□□□ -0.33
COL25A1-204ENST00000494183 TSGA10Q9BZW7 698 aa12.97□□□□□ -0.33
COL25A1-204ENST00000494183 SMIM23A6NLE4 172 aa12.97□□□□□ -0.33
COL25A1-204ENST00000494183 ARHGAP6O43182 974 aa12.97□□□□□ -0.33
COL25A1-204ENST00000494183 CYP2J2P51589 502 aa12.97□□□□□ -0.33
COL25A1-204ENST00000494183 ARHGAP44Q17R89 818 aa12.97□□□□□ -0.33
COL25A1-204ENST00000494183 SLF1Q9BQI6 1058 aa12.97□□□□□ -0.33
COL25A1-204ENST00000494183 SUGCTQ9HAC7 445 aa12.97□□□□□ -0.33
COL25A1-204ENST00000494183 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.97□□□□□ -0.33
COL25A1-204ENST00000494183 FAM170AA1A519 330 aa12.97□□□□□ -0.33
COL25A1-204ENST00000494183 NPR1P16066 1061 aa12.97□□□□□ -0.33
COL25A1-204ENST00000494183 CCDC93Q567U6 631 aa12.97□□□□□ -0.33
COL25A1-204ENST00000494183 USP17L2Q6R6M4 530 aa12.97□□□□□ -0.33
COL25A1-204ENST00000494183 KRBA2Q6ZNG9 492 aa12.97□□□□□ -0.33
COL25A1-204ENST00000494183 DEPTORQ8TB45 409 aa12.97□□□□□ -0.33
COL25A1-204ENST00000494183 LRRC45Q96CN5 670 aa12.97□□□□□ -0.33
COL25A1-204ENST00000494183 CCDC114Q96M63 670 aa12.97□□□□□ -0.33
COL25A1-204ENST00000494183 C21orf2O43822 256 aa12.96□□□□□ -0.33
COL25A1-204ENST00000494183 FOSP01100 380 aaPredicted RBP12.96□□□□□ -0.33
COL25A1-204ENST00000494183 SPECC1LQ69YQ0 1117 aa12.96□□□□□ -0.33
COL25A1-204ENST00000494183 RRAGAQ7L523 313 aa12.96□□□□□ -0.33
COL25A1-204ENST00000494183 MCF2L2Q86YR7 1114 aa12.96□□□□□ -0.33
COL25A1-204ENST00000494183 OTUD6BQ8N6M0 293 aa12.96□□□□□ -0.33
COL25A1-204ENST00000494183 PSMB7Q99436 277 aa12.96□□□□□ -0.33
COL25A1-204ENST00000494183 CTTNBP2NLQ9P2B4 639 aa12.96□□□□□ -0.33
COL25A1-204ENST00000494183 SWAP70Q9UH65 585 aa12.96□□□□□ -0.33
COL25A1-204ENST00000494183 SOS2Q07890 1332 aaPredicted RBP12.96□□□□□ -0.33
COL25A1-204ENST00000494183 UBXN2AP68543 259 aa12.96□□□□□ -0.33
COL25A1-204ENST00000494183 NR5A1Q13285 461 aa12.96□□□□□ -0.33
COL25A1-204ENST00000494183 FAM102BQ5T8I3 360 aa12.96□□□□□ -0.33
COL25A1-204ENST00000494183 SEL1L2Q5TEA6 688 aa12.96□□□□□ -0.33
COL25A1-204ENST00000494183 FAM178BQ8IXR5 827 aa12.96□□□□□ -0.33
COL25A1-204ENST00000494183 TTLL6Q8N841 843 aa12.96□□□□□ -0.33
COL25A1-204ENST00000494183 INCENPQ9NQS7 918 aa12.96□□□□□ -0.33
COL25A1-204ENST00000494183 PCDHA5Q9Y5H7 936 aa12.96□□□□□ -0.33
COL25A1-204ENST00000494183 PRDX5P30044 214 aa12.96□□□□□ -0.34
COL25A1-204ENST00000494183 ADKP55263 362 aaKnown RBP12.96□□□□□ -0.34
COL25A1-204ENST00000494183 LRMPQ12912 555 aa12.96□□□□□ -0.34
COL25A1-204ENST00000494183 ASPRV1Q53RT3 343 aa12.96□□□□□ -0.34
COL25A1-204ENST00000494183 MICALCLQ6ZW33 695 aa12.96□□□□□ -0.34
COL25A1-204ENST00000494183 MIGA2Q7L4E1 593 aa12.96□□□□□ -0.34
COL25A1-204ENST00000494183 ATRIPQ8WXE1 791 aa12.96□□□□□ -0.34
COL25A1-204ENST00000494183 CELF1Q92879 486 aaKnown RBP12.96□□□□□ -0.34
COL25A1-204ENST00000494183 JAKMIP2Q96AA8 810 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms