RNA–Protein interactions for RNA: ENST00000494164.5

NEPRO-220, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 4

Gene NEPRO, Length 741 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-220ENST00000494164 LRRC41Q15345 812 aa18.14■□□□□ 0.49
NEPRO-220ENST00000494164 HSP90AB4PQ58FF6 505 aa18.14■□□□□ 0.49
NEPRO-220ENST00000494164 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.14■□□□□ 0.49
NEPRO-220ENST00000494164 LENG1Q96BZ8 264 aaPredicted RBP18.14■□□□□ 0.49
NEPRO-220ENST00000494164 VCPKMTQ9H867 229 aa18.14■□□□□ 0.49
NEPRO-220ENST00000494164 PDLIM7Q9NR12 457 aa18.14■□□□□ 0.49
NEPRO-220ENST00000494164 PAG1Q9NWQ8 432 aa18.14■□□□□ 0.49
NEPRO-220ENST00000494164 SWAP70Q9UH65 585 aa18.14■□□□□ 0.49
NEPRO-220ENST00000494164 LRRC37A2A6NM11 1700 aa18.14■□□□□ 0.49
NEPRO-220ENST00000494164 SPTBN5Q9NRC6 3674 aaKnown RBP18.13■□□□□ 0.49
NEPRO-220ENST00000494164 CDK8P49336 464 aa18.13■□□□□ 0.49
NEPRO-220ENST00000494164 TMED8Q6PL24 325 aaPredicted RBP18.13■□□□□ 0.49
NEPRO-220ENST00000494164 STK11IPQ8N1F8 1099 aa18.13■□□□□ 0.49
NEPRO-220ENST00000494164 MB21D1Q8N884 522 aa18.13■□□□□ 0.49
NEPRO-220ENST00000494164 KIF1BPQ96EK5 621 aa18.13■□□□□ 0.49
NEPRO-220ENST00000494164 MROH8Q9H579 483 aa18.13■□□□□ 0.49
NEPRO-220ENST00000494164 TMX2Q9Y320 296 aa18.13■□□□□ 0.49
NEPRO-220ENST00000494164 TRIM43BA6NCK2 446 aa18.12■□□□□ 0.49
NEPRO-220ENST00000494164 FCER1AP12319 257 aa18.12■□□□□ 0.49
NEPRO-220ENST00000494164 EEF2P13639 858 aaKnown RBP18.12■□□□□ 0.49
NEPRO-220ENST00000494164 TAL1P17542 331 aaPredicted RBP18.12■□□□□ 0.49
NEPRO-220ENST00000494164 ADD2P35612 726 aa18.12■□□□□ 0.49
NEPRO-220ENST00000494164 TRIM43Q96BQ3 446 aaPredicted RBP18.12■□□□□ 0.49
NEPRO-220ENST00000494164 MMP19Q99542 508 aa18.12■□□□□ 0.49
NEPRO-220ENST00000494164 SLC5A4Q9NY91 659 aa18.12■□□□□ 0.49
NEPRO-220ENST00000494164 MYH6P13533 1939 aa18.11■□□□□ 0.49
NEPRO-220ENST00000494164 USP17L12C9JPN9 530 aa18.11■□□□□ 0.49
NEPRO-220ENST00000494164 USP17L21D6R901 530 aa18.11■□□□□ 0.49
NEPRO-220ENST00000494164 WDR46O15213 610 aaKnown RBP18.11■□□□□ 0.49
NEPRO-220ENST00000494164 PGK1P00558 417 aa18.11■□□□□ 0.49
NEPRO-220ENST00000494164 FAM109BQ6ICB4 259 aaPredicted RBP18.11■□□□□ 0.49
NEPRO-220ENST00000494164 SIRT2Q8IXJ6 389 aa18.11■□□□□ 0.49
NEPRO-220ENST00000494164 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.11■□□□□ 0.49
NEPRO-220ENST00000494164 SH2D4AQ9H788 454 aa18.11■□□□□ 0.49
NEPRO-220ENST00000494164 XPNPEP3Q9NQH7 507 aa18.11■□□□□ 0.49
NEPRO-220ENST00000494164 COG6Q9Y2V7 657 aa18.11■□□□□ 0.49
NEPRO-220ENST00000494164 TCF20Q9UGU0 1960 aaKnown RBP18.11■□□□□ 0.49
NEPRO-220ENST00000494164 SCN5AQ14524 2016 aa18.1■□□□□ 0.49
NEPRO-220ENST00000494164 ITGB8P26012 769 aa18.1■□□□□ 0.49
NEPRO-220ENST00000494164 SNX17Q15036 470 aa18.1■□□□□ 0.49
NEPRO-220ENST00000494164 FAM83BQ5T0W9 1011 aa18.1■□□□□ 0.49
NEPRO-220ENST00000494164 C12orf60Q5U649 245 aa18.1■□□□□ 0.49
NEPRO-220ENST00000494164 CDX2Q99626 313 aaPredicted RBP18.1■□□□□ 0.49
NEPRO-220ENST00000494164 SLC4A4Q9Y6R1 1079 aa18.1■□□□□ 0.49
NEPRO-220ENST00000494164 RARBP10826 455 aa18.09■□□□□ 0.49
NEPRO-220ENST00000494164 SLC4A3P48751 1232 aa18.09■□□□□ 0.49
NEPRO-220ENST00000494164 TLE2Q04725 743 aa18.09■□□□□ 0.49
NEPRO-220ENST00000494164 C16orf86Q6ZW13 317 aa18.09■□□□□ 0.49
NEPRO-220ENST00000494164 AMOTL1Q8IY63 956 aa18.09■□□□□ 0.49
NEPRO-220ENST00000494164 ABRAQ8N0Z2 381 aa18.09■□□□□ 0.49
NEPRO-220ENST00000494164 MYLIPQ8WY64 445 aa18.09■□□□□ 0.49
NEPRO-220ENST00000494164 NUP88Q99567 741 aaPredicted RBP18.09■□□□□ 0.49
NEPRO-220ENST00000494164 ATP8A2Q9NTI2 1148 aa18.09■□□□□ 0.49
NEPRO-220ENST00000494164 REV3LO60673 3130 aa18.09■□□□□ 0.49
NEPRO-220ENST00000494164 PQBP1O60828 265 aaKnown RBP18.08■□□□□ 0.48
NEPRO-220ENST00000494164 MIER1Q8N108 512 aa18.08■□□□□ 0.48
NEPRO-220ENST00000494164 TINF2Q9BSI4 451 aa18.08■□□□□ 0.48
NEPRO-220ENST00000494164 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.08■□□□□ 0.48
NEPRO-220ENST00000494164 TTYH1Q9H313 450 aaPredicted RBP18.08■□□□□ 0.48
NEPRO-220ENST00000494164 TRIP12Q14669 1992 aaPredicted RBP18.08■□□□□ 0.48
NEPRO-220ENST00000494164 A0A1W2PQ45 241 aaPredicted RBP18.07■□□□□ 0.48
NEPRO-220ENST00000494164 A0A1W2PQY0 241 aa18.07■□□□□ 0.48
NEPRO-220ENST00000494164 VWA5AO00534 786 aa18.07■□□□□ 0.48
NEPRO-220ENST00000494164 SMARCA5O60264 1052 aaPredicted RBP18.07■□□□□ 0.48
NEPRO-220ENST00000494164 HMMRO75330 724 aa18.07■□□□□ 0.48
NEPRO-220ENST00000494164 SLC25A27O95847 323 aa18.07■□□□□ 0.48
NEPRO-220ENST00000494164 EPHB4P54760 987 aa18.07■□□□□ 0.48
NEPRO-220ENST00000494164 KCTD2Q14681 263 aa18.07■□□□□ 0.48
NEPRO-220ENST00000494164 CTR9Q6PD62 1173 aa18.07■□□□□ 0.48
NEPRO-220ENST00000494164 RIOX2Q8IUF8 465 aa18.07■□□□□ 0.48
NEPRO-220ENST00000494164 MAFAQ8NHW3 353 aaPredicted RBP18.07■□□□□ 0.48
NEPRO-220ENST00000494164 CCDC17Q96LX7 622 aa18.07■□□□□ 0.48
NEPRO-220ENST00000494164 HAUS7Q99871 368 aa18.07■□□□□ 0.48
NEPRO-220ENST00000494164 PUS7LQ9H0K6 701 aaKnown RBP18.07■□□□□ 0.48
NEPRO-220ENST00000494164 SEMA6BQ9H3T3 888 aa18.07■□□□□ 0.48
NEPRO-220ENST00000494164 GOPCQ9HD26 462 aa18.07■□□□□ 0.48
NEPRO-220ENST00000494164 PPP1R9AQ9ULJ8 1098 aa18.07■□□□□ 0.48
NEPRO-220ENST00000494164 PHF24Q9UPV7 400 aa18.07■□□□□ 0.48
NEPRO-220ENST00000494164 CLTBP09497 229 aa18.06■□□□□ 0.48
NEPRO-220ENST00000494164 STAT3P40763 770 aa18.06■□□□□ 0.48
NEPRO-220ENST00000494164 ZNF792Q3KQV3 632 aa18.06■□□□□ 0.48
NEPRO-220ENST00000494164 RPAP2Q8IXW5 612 aaPredicted RBP18.06■□□□□ 0.48
NEPRO-220ENST00000494164 DDRGK1Q96HY6 314 aa18.06■□□□□ 0.48
NEPRO-220ENST00000494164 RNPC3Q96LT9 517 aaKnown RBP18.06■□□□□ 0.48
NEPRO-220ENST00000494164 KANSL2Q9H9L4 492 aa18.06■□□□□ 0.48
NEPRO-220ENST00000494164 ZNF214Q9UL59 606 aaPredicted RBP18.06■□□□□ 0.48
NEPRO-220ENST00000494164 ADAMTS5Q9UNA0 930 aa18.06■□□□□ 0.48
NEPRO-220ENST00000494164 ZBED9Q6R2W3 1325 aa18.05■□□□□ 0.48
NEPRO-220ENST00000494164 ZNF865P0CJ78 1059 aaPredicted RBP18.05■□□□□ 0.48
NEPRO-220ENST00000494164 ATP5JP18859 108 aa18.05■□□□□ 0.48
NEPRO-220ENST00000494164 IRX5P78411 483 aaPredicted RBP18.05■□□□□ 0.48
NEPRO-220ENST00000494164 RNF180Q86T96 592 aa18.05■□□□□ 0.48
NEPRO-220ENST00000494164 REPS2Q8NFH8 660 aa18.05■□□□□ 0.48
NEPRO-220ENST00000494164 MUC3AQ02505 3323 aa18.05■□□□□ 0.48
NEPRO-220ENST00000494164 SYNRGQ9UMZ2 1314 aa18.04■□□□□ 0.48
NEPRO-220ENST00000494164 RAB11FIP3O75154 756 aa18.04■□□□□ 0.48
NEPRO-220ENST00000494164 RAG1P15918 1043 aa18.04■□□□□ 0.48
NEPRO-220ENST00000494164 SNRNP48Q6IEG0 339 aaKnown RBP18.04■□□□□ 0.48
NEPRO-220ENST00000494164 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.04■□□□□ 0.48
NEPRO-220ENST00000494164 ZBTB40Q9NUA8 1239 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms