RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 CWC22Q9HCG8 908 aaKnown RBP10.21□□□□□ -0.77
LRCH3-219ENST00000494069 HMX1Q9NP08 348 aaPredicted RBP10.21□□□□□ -0.77
LRCH3-219ENST00000494069 INCENPQ9NQS7 918 aa10.21□□□□□ -0.77
LRCH3-219ENST00000494069 HOXC10Q9NYD6 342 aa10.21□□□□□ -0.77
LRCH3-219ENST00000494069 STAP2Q9UGK3 403 aa10.21□□□□□ -0.77
LRCH3-219ENST00000494069 RPTORQ8N122 1335 aa10.21□□□□□ -0.78
LRCH3-219ENST00000494069 RLFQ13129 1914 aa10.21□□□□□ -0.78
LRCH3-219ENST00000494069 IGKV6D-41A0A0C4DH26 115 aa10.2□□□□□ -0.78
LRCH3-219ENST00000494069 SLC15A5A6NIM6 579 aa10.2□□□□□ -0.78
LRCH3-219ENST00000494069 MYH8P13535 1937 aa10.2□□□□□ -0.78
LRCH3-219ENST00000494069 GNAT2P19087 354 aa10.2□□□□□ -0.78
LRCH3-219ENST00000494069 ERCC3P19447 782 aa10.2□□□□□ -0.78
LRCH3-219ENST00000494069 CCNA1P78396 465 aa10.2□□□□□ -0.78
LRCH3-219ENST00000494069 GRB14Q14449 540 aa10.2□□□□□ -0.78
LRCH3-219ENST00000494069 PLS1Q14651 629 aa10.2□□□□□ -0.78
LRCH3-219ENST00000494069 TMEM132BQ14DG7 1078 aa10.2□□□□□ -0.78
LRCH3-219ENST00000494069 FAM83BQ5T0W9 1011 aa10.2□□□□□ -0.78
LRCH3-219ENST00000494069 VPS53Q5VIR6 699 aa10.2□□□□□ -0.78
LRCH3-219ENST00000494069 LPAR1Q92633 364 aa10.2□□□□□ -0.78
LRCH3-219ENST00000494069 MS4A3Q96HJ5 214 aa10.2□□□□□ -0.78
LRCH3-219ENST00000494069 ROBO3Q96MS0 1386 aa10.2□□□□□ -0.78
LRCH3-219ENST00000494069 APBA2Q99767 749 aa10.2□□□□□ -0.78
LRCH3-219ENST00000494069 SPATC1LQ9H0A9 340 aa10.2□□□□□ -0.78
LRCH3-219ENST00000494069 TACC3Q9Y6A5 838 aa10.2□□□□□ -0.78
LRCH3-219ENST00000494069 F5H6K3 240 aa10.19□□□□□ -0.78
LRCH3-219ENST00000494069 WDR46O15213 610 aaKnown RBP10.19□□□□□ -0.78
LRCH3-219ENST00000494069 COBLO75128 1261 aa10.19□□□□□ -0.78
LRCH3-219ENST00000494069 NDUFB10O96000 172 aa10.19□□□□□ -0.78
LRCH3-219ENST00000494069 CYP2C19P33261 490 aa10.19□□□□□ -0.78
LRCH3-219ENST00000494069 KLRC3Q07444 240 aa10.19□□□□□ -0.78
LRCH3-219ENST00000494069 FAM47AQ5JRC9 791 aa10.19□□□□□ -0.78
LRCH3-219ENST00000494069 HABP4Q5JVS0 413 aaKnown RBP10.19□□□□□ -0.78
LRCH3-219ENST00000494069 NCAPG2Q86XI2 1143 aa10.19□□□□□ -0.78
LRCH3-219ENST00000494069 SMC5Q8IY18 1101 aa10.19□□□□□ -0.78
LRCH3-219ENST00000494069 ZNF444Q8N0Y2 327 aaPredicted RBP10.19□□□□□ -0.78
LRCH3-219ENST00000494069 CHMP4CQ96CF2 233 aa10.19□□□□□ -0.78
LRCH3-219ENST00000494069 KIF12Q96FN5 646 aa10.19□□□□□ -0.78
LRCH3-219ENST00000494069 CEP95Q96GE4 821 aa10.19□□□□□ -0.78
LRCH3-219ENST00000494069 FAM227BQ96M60 508 aa10.19□□□□□ -0.78
LRCH3-219ENST00000494069 SH2D4AQ9H788 454 aa10.19□□□□□ -0.78
LRCH3-219ENST00000494069 PCDH10Q9P2E7 1040 aa10.19□□□□□ -0.78
LRCH3-219ENST00000494069 CLIP2Q9UDT6 1046 aa10.19□□□□□ -0.78
LRCH3-219ENST00000494069 COLQQ9Y215 455 aaPredicted RBP10.19□□□□□ -0.78
LRCH3-219ENST00000494069 SUPT16HQ9Y5B9 1047 aaKnown RBP10.19□□□□□ -0.78
LRCH3-219ENST00000494069 GREB1LQ9C091 1923 aaPredicted RBP10.18□□□□□ -0.78
LRCH3-219ENST00000494069 A0A0D9SFI3 127 aa10.18□□□□□ -0.78
LRCH3-219ENST00000494069 IGHA2P01877 340 aa10.18□□□□□ -0.78
LRCH3-219ENST00000494069 ADORA2AP29274 412 aa10.18□□□□□ -0.78
LRCH3-219ENST00000494069 CTDSPL2Q05D32 466 aa10.18□□□□□ -0.78
LRCH3-219ENST00000494069 PPARAQ07869 468 aa10.18□□□□□ -0.78
LRCH3-219ENST00000494069 LRRFIP1Q32MZ4 808 aaKnown RBP10.18□□□□□ -0.78
LRCH3-219ENST00000494069 LHX8Q68G74 356 aa10.18□□□□□ -0.78
LRCH3-219ENST00000494069 IFNLR1Q8IU57 520 aaPredicted RBP10.18□□□□□ -0.78
LRCH3-219ENST00000494069 LRRC47Q8N1G4 583 aaKnown RBP10.18□□□□□ -0.78
LRCH3-219ENST00000494069 TRPV1Q8NER1 839 aa10.18□□□□□ -0.78
LRCH3-219ENST00000494069 REPS2Q8NFH8 660 aa10.18□□□□□ -0.78
LRCH3-219ENST00000494069 EVI5LQ96CN4 794 aa10.18□□□□□ -0.78
LRCH3-219ENST00000494069 NACAP1Q9BZK3 213 aa10.18□□□□□ -0.78
LRCH3-219ENST00000494069 NAPBQ9H115 298 aa10.18□□□□□ -0.78
LRCH3-219ENST00000494069 RWDD1Q9H446 243 aaPredicted RBP10.18□□□□□ -0.78
LRCH3-219ENST00000494069 NYAP2Q9P242 653 aa10.18□□□□□ -0.78
LRCH3-219ENST00000494069 OGDHLQ9ULD0 1010 aa10.18□□□□□ -0.78
LRCH3-219ENST00000494069 PPP1R9AQ9ULJ8 1098 aa10.18□□□□□ -0.78
LRCH3-219ENST00000494069 ADAMTS5Q9UNA0 930 aa10.18□□□□□ -0.78
LRCH3-219ENST00000494069 IVNS1ABPQ9Y6Y0 642 aa10.18□□□□□ -0.78
LRCH3-219ENST00000494069 A0A0G2JMZ2 1700 aa10.17□□□□□ -0.78
LRCH3-219ENST00000494069 VWA5AO00534 786 aa10.17□□□□□ -0.78
LRCH3-219ENST00000494069 HOXC6P09630 235 aa10.17□□□□□ -0.78
LRCH3-219ENST00000494069 IRX6P78412 446 aaPredicted RBP10.17□□□□□ -0.78
LRCH3-219ENST00000494069 TFAP4Q01664 338 aa10.17□□□□□ -0.78
LRCH3-219ENST00000494069 NECAB2Q7Z6G3 386 aa10.17□□□□□ -0.78
LRCH3-219ENST00000494069 DPP9Q86TI2 863 aa10.17□□□□□ -0.78
LRCH3-219ENST00000494069 PLEKHM2Q8IWE5 1019 aa10.17□□□□□ -0.78
LRCH3-219ENST00000494069 TRMT44Q8IYL2 757 aaKnown RBP10.17□□□□□ -0.78
LRCH3-219ENST00000494069 MB21D1Q8N884 522 aa10.17□□□□□ -0.78
LRCH3-219ENST00000494069 SHCBP1Q8NEM2 672 aa10.17□□□□□ -0.78
LRCH3-219ENST00000494069 NEDD1Q8NHV4 660 aa10.17□□□□□ -0.78
LRCH3-219ENST00000494069 DCBLD2Q96PD2 775 aa10.17□□□□□ -0.78
LRCH3-219ENST00000494069 HTATIP2Q9BUP3 242 aa10.17□□□□□ -0.78
LRCH3-219ENST00000494069 GOPCQ9HD26 462 aa10.17□□□□□ -0.78
LRCH3-219ENST00000494069 MTMR4Q9NYA4 1195 aa10.17□□□□□ -0.78
LRCH3-219ENST00000494069 ZNF214Q9UL59 606 aaPredicted RBP10.17□□□□□ -0.78
LRCH3-219ENST00000494069 CEP290O15078 2479 aa10.17□□□□□ -0.78
LRCH3-219ENST00000494069 MAP3K13O43283 966 aa10.16□□□□□ -0.78
LRCH3-219ENST00000494069 NMT2O60551 498 aa10.16□□□□□ -0.78
LRCH3-219ENST00000494069 NMIQ13287 307 aaPredicted RBP10.16□□□□□ -0.78
LRCH3-219ENST00000494069 PRAMEF19Q5SWL8 479 aa10.16□□□□□ -0.78
LRCH3-219ENST00000494069 MFSD14CQ5VZR4 134 aa10.16□□□□□ -0.78
LRCH3-219ENST00000494069 ANO1Q5XXA6 986 aa10.16□□□□□ -0.78
LRCH3-219ENST00000494069 ZNF589Q86UQ0 364 aaPredicted RBP10.16□□□□□ -0.78
LRCH3-219ENST00000494069 CHD1LQ86WJ1 897 aa10.16□□□□□ -0.78
LRCH3-219ENST00000494069 MKL1Q969V6 931 aa10.16□□□□□ -0.78
LRCH3-219ENST00000494069 RILPL2Q969X0 211 aa10.16□□□□□ -0.78
LRCH3-219ENST00000494069 C11orf49Q9H6J7 331 aa10.16□□□□□ -0.78
LRCH3-219ENST00000494069 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.16□□□□□ -0.78
LRCH3-219ENST00000494069 RIPK3Q9Y572 518 aa10.16□□□□□ -0.78
LRCH3-219ENST00000494069 PARP14Q460N5 1801 aa10.16□□□□□ -0.78
LRCH3-219ENST00000494069 PFASO15067 1338 aa10.15□□□□□ -0.78
LRCH3-219ENST00000494069 TRIM6-TRIM34B2RNG4 842 aa10.15□□□□□ -0.78
LRCH3-219ENST00000494069 STRNO43815 780 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms