RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 TMTC1Q8IUR5 882 aa13.02□□□□□ -0.33
RFC4-214ENST00000494047 LCORLQ8N3X6 602 aa13.02□□□□□ -0.33
RFC4-214ENST00000494047 EHBP1Q8NDI1 1231 aa13.02□□□□□ -0.33
RFC4-214ENST00000494047 GOLGA1Q92805 767 aa13.02□□□□□ -0.33
RFC4-214ENST00000494047 CNKSR1Q969H4 720 aa13.02□□□□□ -0.33
RFC4-214ENST00000494047 CCDC47Q96A33 483 aaKnown RBP13.02□□□□□ -0.33
RFC4-214ENST00000494047 MASTLQ96GX5 879 aa13.02□□□□□ -0.33
RFC4-214ENST00000494047 LZTS2Q9BRK4 669 aa13.02□□□□□ -0.33
RFC4-214ENST00000494047 PRDM4Q9UKN5 801 aa13.02□□□□□ -0.33
RFC4-214ENST00000494047 ERLIN1O75477 346 aa13.01□□□□□ -0.33
RFC4-214ENST00000494047 TADA3O75528 432 aa13.01□□□□□ -0.33
RFC4-214ENST00000494047 ATP1A3P13637 1013 aa13.01□□□□□ -0.33
RFC4-214ENST00000494047 FECHP22830 423 aa13.01□□□□□ -0.33
RFC4-214ENST00000494047 TOB1P50616 345 aaPredicted RBP13.01□□□□□ -0.33
RFC4-214ENST00000494047 CHRNDQ07001 517 aa13.01□□□□□ -0.33
RFC4-214ENST00000494047 NR1I3Q14994 352 aa13.01□□□□□ -0.33
RFC4-214ENST00000494047 RRP12Q5JTH9 1297 aaKnown RBP13.01□□□□□ -0.33
RFC4-214ENST00000494047 SOGA3Q5TF21 947 aa13.01□□□□□ -0.33
RFC4-214ENST00000494047 TMTC3Q6ZXV5 915 aa13.01□□□□□ -0.33
RFC4-214ENST00000494047 REXO1L1PQ8IX06 675 aa13.01□□□□□ -0.33
RFC4-214ENST00000494047 FBXW7Q969H0 707 aa13.01□□□□□ -0.33
RFC4-214ENST00000494047 AIFM3Q96NN9 605 aa13.01□□□□□ -0.33
RFC4-214ENST00000494047 CLIC6Q96NY7 704 aa13.01□□□□□ -0.33
RFC4-214ENST00000494047 SERTAD1Q9UHV2 236 aa13.01□□□□□ -0.33
RFC4-214ENST00000494047 RWDD2AQ9UIY3 292 aa13.01□□□□□ -0.33
RFC4-214ENST00000494047 GTPBP6O43824 516 aaPredicted RBP13□□□□□ -0.33
RFC4-214ENST00000494047 SRGNP10124 158 aa13□□□□□ -0.33
RFC4-214ENST00000494047 RXRAP19793 462 aa13□□□□□ -0.33
RFC4-214ENST00000494047 MAP3K9P80192 1104 aa13□□□□□ -0.33
RFC4-214ENST00000494047 BRD3Q15059 726 aa13□□□□□ -0.33
RFC4-214ENST00000494047 ARHGAP29Q52LW3 1261 aa13□□□□□ -0.33
RFC4-214ENST00000494047 TTC38Q5R3I4 469 aa13□□□□□ -0.33
RFC4-214ENST00000494047 CDKAL1Q5VV42 579 aa13□□□□□ -0.33
RFC4-214ENST00000494047 SUSD4Q5VX71 490 aa13□□□□□ -0.33
RFC4-214ENST00000494047 TRIM65Q6PJ69 517 aa13□□□□□ -0.33
RFC4-214ENST00000494047 RAB11FIP4Q86YS3 637 aa13□□□□□ -0.33
RFC4-214ENST00000494047 TMEM139Q8IV31 216 aa13□□□□□ -0.33
RFC4-214ENST00000494047 TC2NQ8N9U0 490 aa13□□□□□ -0.33
RFC4-214ENST00000494047 CCDC12Q8WUD4 166 aaPredicted RBP13□□□□□ -0.33
RFC4-214ENST00000494047 NUP133Q8WUM0 1156 aa13□□□□□ -0.33
RFC4-214ENST00000494047 ERCC4Q92889 916 aaPredicted RBP13□□□□□ -0.33
RFC4-214ENST00000494047 ZNF622Q969S3 477 aaKnown RBP eCLIP13□□□□□ -0.334e-10■□□□□ 8.7
RFC4-214ENST00000494047 ACBD3Q9H3P7 528 aa13□□□□□ -0.33
RFC4-214ENST00000494047 CCDC151A5D8V7 595 aa12.99□□□□□ -0.33
RFC4-214ENST00000494047 URI1O94763 535 aaPredicted RBP12.99□□□□□ -0.33
RFC4-214ENST00000494047 NPR1P16066 1061 aa12.99□□□□□ -0.33
RFC4-214ENST00000494047 ALDH1B1P30837 517 aa12.99□□□□□ -0.33
RFC4-214ENST00000494047 ENAHQ8N8S7 591 aaPredicted RBP12.99□□□□□ -0.33
RFC4-214ENST00000494047 RPGRIP1Q96KN7 1286 aa12.99□□□□□ -0.33
RFC4-214ENST00000494047 RIOK1Q9BRS2 568 aaKnown RBP12.99□□□□□ -0.33
RFC4-214ENST00000494047 CSRNP2Q9H175 543 aa12.99□□□□□ -0.33
RFC4-214ENST00000494047 CABP5Q9NP86 173 aa12.99□□□□□ -0.33
RFC4-214ENST00000494047 GJB4Q9NTQ9 266 aa12.99□□□□□ -0.33
RFC4-214ENST00000494047 ZNHIT6Q9NWK9 470 aaKnown RBP12.99□□□□□ -0.33
RFC4-214ENST00000494047 PCDHB6Q9Y5E3 794 aa12.99□□□□□ -0.33
RFC4-214ENST00000494047 MRFAP1Q9Y605 127 aa12.99□□□□□ -0.33
RFC4-214ENST00000494047 VWA3AA6NCI4 1184 aa12.98□□□□□ -0.33
RFC4-214ENST00000494047 LRRC10BA6NIK2 292 aa12.98□□□□□ -0.33
RFC4-214ENST00000494047 hCG_1984214I3L0E3 225 aa12.98□□□□□ -0.33
RFC4-214ENST00000494047 PPFIA3O75145 1194 aa12.98□□□□□ -0.33
RFC4-214ENST00000494047 EIF3JO75822 258 aaKnown RBP12.98□□□□□ -0.33
RFC4-214ENST00000494047 SCG2P13521 617 aa12.98□□□□□ -0.33
RFC4-214ENST00000494047 GNG11P61952 73 aa12.98□□□□□ -0.33
RFC4-214ENST00000494047 GSTO1P78417 241 aa12.98□□□□□ -0.33
RFC4-214ENST00000494047 PPP2R3AQ06190 1150 aa12.98□□□□□ -0.33
RFC4-214ENST00000494047 TROAPQ12815 778 aa12.98□□□□□ -0.33
RFC4-214ENST00000494047 DPYDQ12882 1025 aa12.98□□□□□ -0.33
RFC4-214ENST00000494047 TSR1Q2NL82 804 aaKnown RBP12.98□□□□□ -0.33
RFC4-214ENST00000494047 SLC10A5Q5PT55 438 aa12.98□□□□□ -0.33
RFC4-214ENST00000494047 ZNF771Q7L3S4 317 aaPredicted RBP12.98□□□□□ -0.33
RFC4-214ENST00000494047 RASGRP2Q7LDG7 609 aa12.98□□□□□ -0.33
RFC4-214ENST00000494047 DGKHQ86XP1 1220 aa12.98□□□□□ -0.33
RFC4-214ENST00000494047 FAM114A1Q8IWE2 563 aa12.98□□□□□ -0.33
RFC4-214ENST00000494047 TXLNBQ8N3L3 684 aa12.98□□□□□ -0.33
RFC4-214ENST00000494047 PDILTQ8N807 584 aa12.98□□□□□ -0.33
RFC4-214ENST00000494047 ZNF713Q8N859 430 aaPredicted RBP12.98□□□□□ -0.33
RFC4-214ENST00000494047 HNRNPLLQ8WVV9 542 aaKnown RBP12.98□□□□□ -0.33
RFC4-214ENST00000494047 AK8Q96MA6 479 aa12.98□□□□□ -0.33
RFC4-214ENST00000494047 ARFGAP3Q9NP61 516 aa12.98□□□□□ -0.33
RFC4-214ENST00000494047 LIMA1Q9UHB6 759 aaKnown RBP12.98□□□□□ -0.33
RFC4-214ENST00000494047 ROBO3Q96MS0 1386 aa12.97□□□□□ -0.33
RFC4-214ENST00000494047 CNTNAP5Q8WYK1 1306 aa12.97□□□□□ -0.33
RFC4-214ENST00000494047 ZC3H4Q9UPT8 1303 aaKnown RBP12.97□□□□□ -0.33
RFC4-214ENST00000494047 SPDYE4A6NLX3 237 aa12.97□□□□□ -0.33
RFC4-214ENST00000494047 H7C1D1 291 aa12.97□□□□□ -0.33
RFC4-214ENST00000494047 MFAP3LO75121 409 aa12.97□□□□□ -0.33
RFC4-214ENST00000494047 EEF1GP26641 437 aaKnown RBP12.97□□□□□ -0.33
RFC4-214ENST00000494047 PRPHP41219 470 aa12.97□□□□□ -0.33
RFC4-214ENST00000494047 FUT2Q10981 343 aa12.97□□□□□ -0.33
RFC4-214ENST00000494047 PAK1Q13153 545 aa12.97□□□□□ -0.33
RFC4-214ENST00000494047 CUL4BQ13620 913 aa12.97□□□□□ -0.33
RFC4-214ENST00000494047 KCNB1Q14721 858 aa12.97□□□□□ -0.33
RFC4-214ENST00000494047 TERF2Q15554 542 aa12.97□□□□□ -0.33
RFC4-214ENST00000494047 PFKFB3Q16875 520 aaPredicted RBP12.97□□□□□ -0.33
RFC4-214ENST00000494047 WHAMMP3Q1A5X7 153 aa12.97□□□□□ -0.33
RFC4-214ENST00000494047 ZNF658Q5TYW1 1059 aaPredicted RBP12.97□□□□□ -0.33
RFC4-214ENST00000494047 CYP26C1Q6V0L0 522 aa12.97□□□□□ -0.33
RFC4-214ENST00000494047 ZNF662Q6ZS27 426 aa12.97□□□□□ -0.33
RFC4-214ENST00000494047 FOXP4Q8IVH2 680 aaPredicted RBP12.97□□□□□ -0.33
RFC4-214ENST00000494047 IGSF22Q8N9C0 903 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms