RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 SHISA2Q6UWI4 295 aa5.9□□□□□ -1.46
GTF3A-208ENST00000493903 NSMFQ6X4W1 530 aa5.9□□□□□ -1.46
GTF3A-208ENST00000493903 MAP4K3Q8IVH8 894 aa5.9□□□□□ -1.46
GTF3A-208ENST00000493903 WDR75Q8IWA0 830 aaKnown RBP5.9□□□□□ -1.46
GTF3A-208ENST00000493903 LRRN4CLQ8ND94 238 aa5.9□□□□□ -1.46
GTF3A-208ENST00000493903 WDR66Q8TBY9 1149 aa5.9□□□□□ -1.46
GTF3A-208ENST00000493903 ZNF507Q8TCN5 953 aa5.9□□□□□ -1.46
GTF3A-208ENST00000493903 WDR89Q96FK6 387 aaPredicted RBP5.9□□□□□ -1.46
GTF3A-208ENST00000493903 KLHL25Q9H0H3 589 aa5.9□□□□□ -1.46
GTF3A-208ENST00000493903 GBP3Q9H0R5 595 aa5.9□□□□□ -1.46
GTF3A-208ENST00000493903 TRIM39Q9HCM9 518 aa5.9□□□□□ -1.46
GTF3A-208ENST00000493903 SLC5A4Q9NY91 659 aa5.9□□□□□ -1.46
GTF3A-208ENST00000493903 FAM83GA6ND36 823 aa5.89□□□□□ -1.47
GTF3A-208ENST00000493903 PRODHO43272 600 aa5.89□□□□□ -1.47
GTF3A-208ENST00000493903 PLIN1O60240 522 aa5.89□□□□□ -1.47
GTF3A-208ENST00000493903 AOC2O75106 756 aa5.89□□□□□ -1.47
GTF3A-208ENST00000493903 CLEC3AO75596 197 aa5.89□□□□□ -1.47
GTF3A-208ENST00000493903 DNAJC8O75937 253 aaPredicted RBP5.89□□□□□ -1.47
GTF3A-208ENST00000493903 UBOX5O94941 541 aa5.89□□□□□ -1.47
GTF3A-208ENST00000493903 ASLP04424 464 aa5.89□□□□□ -1.47
GTF3A-208ENST00000493903 CAP2P40123 477 aa5.89□□□□□ -1.47
GTF3A-208ENST00000493903 NEK2P51955 445 aa5.89□□□□□ -1.47
GTF3A-208ENST00000493903 UBE4AQ14139 1066 aa5.89□□□□□ -1.47
GTF3A-208ENST00000493903 AXDND1Q5T1B0 1012 aaPredicted RBP5.89□□□□□ -1.47
GTF3A-208ENST00000493903 TXNDC11Q6PKC3 985 aa5.89□□□□□ -1.47
GTF3A-208ENST00000493903 STRA8Q7Z7C7 330 aa5.89□□□□□ -1.47
GTF3A-208ENST00000493903 FBXO11Q86XK2 927 aa5.89□□□□□ -1.47
GTF3A-208ENST00000493903 CRACR2BQ8N4Y2 399 aaPredicted RBP5.89□□□□□ -1.47
GTF3A-208ENST00000493903 DTWD1Q8N5C7 304 aa5.89□□□□□ -1.47
GTF3A-208ENST00000493903 ZNF513Q8N8E2 541 aaPredicted RBP5.89□□□□□ -1.47
GTF3A-208ENST00000493903 KCT2Q8NC54 265 aa5.89□□□□□ -1.47
GTF3A-208ENST00000493903 GSTCDQ8NEC7 633 aa5.89□□□□□ -1.47
GTF3A-208ENST00000493903 LEO1Q8WVC0 666 aaPredicted RBP5.89□□□□□ -1.47
GTF3A-208ENST00000493903 OSBP2Q969R2 916 aa5.89□□□□□ -1.47
GTF3A-208ENST00000493903 CAMKK2Q96RR4 588 aa5.89□□□□□ -1.47
GTF3A-208ENST00000493903 SPOCK3Q9BQ16 436 aa5.89□□□□□ -1.47
GTF3A-208ENST00000493903 WDR18Q9BV38 432 aa5.89□□□□□ -1.47
GTF3A-208ENST00000493903 PUS7LQ9H0K6 701 aaKnown RBP5.89□□□□□ -1.47
GTF3A-208ENST00000493903 PICK1Q9NRD5 415 aa5.89□□□□□ -1.47
GTF3A-208ENST00000493903 SPEF1Q9Y4P9 236 aa5.89□□□□□ -1.47
GTF3A-208ENST00000493903 LOC100289279A0A1B0GTE1 492 aa5.88□□□□□ -1.47
GTF3A-208ENST00000493903 SHTN1A0MZ66 631 aa5.88□□□□□ -1.47
GTF3A-208ENST00000493903 NOP56O00567 594 aaKnown RBP5.88□□□□□ -1.47
GTF3A-208ENST00000493903 GPR39O43194 453 aa5.88□□□□□ -1.47
GTF3A-208ENST00000493903 CBFA2T2O43439 604 aa5.88□□□□□ -1.47
GTF3A-208ENST00000493903 KATNA1O75449 491 aa5.88□□□□□ -1.47
GTF3A-208ENST00000493903 PPM1BO75688 479 aa5.88□□□□□ -1.47
GTF3A-208ENST00000493903 APBA3O96018 575 aa5.88□□□□□ -1.47
GTF3A-208ENST00000493903 PROCP04070 461 aa5.88□□□□□ -1.47
GTF3A-208ENST00000493903 TP53P04637 393 aaPredicted RBP5.88□□□□□ -1.47
GTF3A-208ENST00000493903 GBP1P32455 592 aa5.88□□□□□ -1.47
GTF3A-208ENST00000493903 FLT3P36888 993 aa5.88□□□□□ -1.47
GTF3A-208ENST00000493903 ID3Q02535 119 aa5.88□□□□□ -1.47
GTF3A-208ENST00000493903 HDAC1Q13547 482 aaPredicted RBP5.88□□□□□ -1.47
GTF3A-208ENST00000493903 POMZP3Q6PJE2 187 aa5.88□□□□□ -1.47
GTF3A-208ENST00000493903 BVESQ8NE79 360 aa5.88□□□□□ -1.47
GTF3A-208ENST00000493903 DCAF11Q8TEB1 546 aa5.88□□□□□ -1.47
GTF3A-208ENST00000493903 KLHDC7BQ96G42 594 aa5.88□□□□□ -1.47
GTF3A-208ENST00000493903 RCC1LQ96I51 464 aaKnown RBP5.88□□□□□ -1.47
GTF3A-208ENST00000493903 RPS6KC1Q96S38 1066 aa5.88□□□□□ -1.47
GTF3A-208ENST00000493903 CSADQ9Y600 493 aa5.88□□□□□ -1.47
GTF3A-208ENST00000493903 C9IYK1 514 aa5.87□□□□□ -1.47
GTF3A-208ENST00000493903 MSTNO14793 375 aa5.87□□□□□ -1.47
GTF3A-208ENST00000493903 TM4SF5O14894 197 aa5.87□□□□□ -1.47
GTF3A-208ENST00000493903 SCGB1D2O95969 90 aa5.87□□□□□ -1.47
GTF3A-208ENST00000493903 KRT18P05783 430 aaKnown RBP5.87□□□□□ -1.47
GTF3A-208ENST00000493903 C6orf222P0C671 652 aaPredicted RBP5.87□□□□□ -1.47
GTF3A-208ENST00000493903 STRN3Q13033 797 aa5.87□□□□□ -1.47
GTF3A-208ENST00000493903 SETDB1Q15047 1291 aa5.87□□□□□ -1.47
GTF3A-208ENST00000493903 MAP9Q49MG5 647 aa5.87□□□□□ -1.47
GTF3A-208ENST00000493903 PPM1JQ5JR12 505 aa5.87□□□□□ -1.47
GTF3A-208ENST00000493903 TDRD10Q5VZ19 366 aaKnown RBP5.87□□□□□ -1.47
GTF3A-208ENST00000493903 BRAPQ7Z569 592 aa5.87□□□□□ -1.47
GTF3A-208ENST00000493903 SPATS2Q86XZ4 545 aaKnown RBP5.87□□□□□ -1.47
GTF3A-208ENST00000493903 CCDC144CPQ8IYA2 1237 aa5.87□□□□□ -1.47
GTF3A-208ENST00000493903 CHPFQ8IZ52 775 aa5.87□□□□□ -1.47
GTF3A-208ENST00000493903 MYO1HQ8N1T3 1032 aa5.87□□□□□ -1.47
GTF3A-208ENST00000493903 RNF214Q8ND24 703 aa5.87□□□□□ -1.47
GTF3A-208ENST00000493903 SLC7A14Q8TBB6 771 aa5.87□□□□□ -1.47
GTF3A-208ENST00000493903 CYB5D2Q8WUJ1 264 aa5.87□□□□□ -1.47
GTF3A-208ENST00000493903 PPP1R14AQ96A00 147 aa5.87□□□□□ -1.47
GTF3A-208ENST00000493903 MRGPRX3Q96LB0 322 aa5.87□□□□□ -1.47
GTF3A-208ENST00000493903 CCDC140Q96MF4 163 aa5.87□□□□□ -1.47
GTF3A-208ENST00000493903 NACC1Q96RE7 527 aa5.87□□□□□ -1.47
GTF3A-208ENST00000493903 USP26Q9BXU7 913 aa5.87□□□□□ -1.47
GTF3A-208ENST00000493903 WHRNQ9P202 907 aa5.87□□□□□ -1.47
GTF3A-208ENST00000493903 APEX2Q9UBZ4 518 aa5.87□□□□□ -1.47
GTF3A-208ENST00000493903 A0A087WZG4 1122 aa5.86□□□□□ -1.47
GTF3A-208ENST00000493903 B4E1Z4 1266 aa5.86□□□□□ -1.47
GTF3A-208ENST00000493903 AKAP10O43572 662 aa5.86□□□□□ -1.47
GTF3A-208ENST00000493903 OPA1O60313 960 aa5.86□□□□□ -1.47
GTF3A-208ENST00000493903 ZEB2O60315 1214 aa5.86□□□□□ -1.47
GTF3A-208ENST00000493903 IGFALSP35858 605 aa5.86□□□□□ -1.47
GTF3A-208ENST00000493903 RAB27AP51159 221 aa5.86□□□□□ -1.47
GTF3A-208ENST00000493903 NEK4P51957 841 aa5.86□□□□□ -1.47
GTF3A-208ENST00000493903 ITKQ08881 620 aa5.86□□□□□ -1.47
GTF3A-208ENST00000493903 MTMR1Q13613 665 aa5.86□□□□□ -1.47
GTF3A-208ENST00000493903 STAT4Q14765 748 aa5.86□□□□□ -1.47
GTF3A-208ENST00000493903 MAMDC2Q7Z304 686 aaPredicted RBP5.86□□□□□ -1.47
GTF3A-208ENST00000493903 ADAT2Q7Z6V5 191 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms