RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 NSUN4Q96CB9 384 aaKnown RBP9.23□□□□□ -0.93
RBM39-238ENST00000493853 ZFP42Q96MM3 310 aa9.23□□□□□ -0.93
RBM39-238ENST00000493853 PARK7Q99497 189 aaKnown RBP9.23□□□□□ -0.93
RBM39-238ENST00000493853 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.23□□□□□ -0.93
RBM39-238ENST00000493853 BIN2Q9UBW5 565 aaPredicted RBP9.23□□□□□ -0.93
RBM39-238ENST00000493853 CDV3Q9UKY7 258 aaKnown RBP9.23□□□□□ -0.93
RBM39-238ENST00000493853 KCNH4Q9UQ05 1017 aa9.23□□□□□ -0.93
RBM39-238ENST00000493853 PTCH2Q9Y6C5 1203 aa9.23□□□□□ -0.93
RBM39-238ENST00000493853 A0A1B0GUL6 1792 aa9.22□□□□□ -0.93
RBM39-238ENST00000493853 DDTLA6NHG4 134 aaPredicted RBP9.22□□□□□ -0.93
RBM39-238ENST00000493853 PTPRAP18433 802 aa9.22□□□□□ -0.93
RBM39-238ENST00000493853 PSMC4P43686 418 aa9.22□□□□□ -0.93
RBM39-238ENST00000493853 TNNI3KQ59H18 835 aa9.22□□□□□ -0.93
RBM39-238ENST00000493853 NAA16Q6N069 864 aaPredicted RBP9.22□□□□□ -0.93
RBM39-238ENST00000493853 C17orf99Q6UX52 265 aa9.22□□□□□ -0.93
RBM39-238ENST00000493853 TEX11Q8IYF3 940 aa9.22□□□□□ -0.93
RBM39-238ENST00000493853 RAET1EQ8TD07 263 aa9.22□□□□□ -0.93
RBM39-238ENST00000493853 SSH3Q8TE77 659 aa9.22□□□□□ -0.93
RBM39-238ENST00000493853 ARMC5Q96C12 935 aa9.22□□□□□ -0.93
RBM39-238ENST00000493853 PURBQ96QR8 312 aaKnown RBP9.22□□□□□ -0.93
RBM39-238ENST00000493853 KCTD15Q96SI1 283 aaPredicted RBP9.22□□□□□ -0.93
RBM39-238ENST00000493853 OCSTAMPQ9BR26 566 aa9.22□□□□□ -0.93
RBM39-238ENST00000493853 TRIM34Q9BYJ4 488 aa9.22□□□□□ -0.93
RBM39-238ENST00000493853 GPR108Q9NPR9 543 aa9.22□□□□□ -0.93
RBM39-238ENST00000493853 DDX4Q9NQI0 724 aaKnown RBP9.22□□□□□ -0.93
RBM39-238ENST00000493853 SNRKQ9NRH2 765 aa9.22□□□□□ -0.93
RBM39-238ENST00000493853 FPGT-TNNI3KV9GXZ4 949 aa9.22□□□□□ -0.93
RBM39-238ENST00000493853 TRIM75PA6NK02 468 aa9.21□□□□□ -0.94
RBM39-238ENST00000493853 PHF20L1A8MW92 1017 aa9.21□□□□□ -0.94
RBM39-238ENST00000493853 MCAMP43121 646 aa9.21□□□□□ -0.94
RBM39-238ENST00000493853 RHBDL3P58872 404 aa9.21□□□□□ -0.94
RBM39-238ENST00000493853 MAP3K10Q02779 954 aa9.21□□□□□ -0.94
RBM39-238ENST00000493853 SMCR8Q8TEV9 937 aaPredicted RBP9.21□□□□□ -0.94
RBM39-238ENST00000493853 ZNF333Q96JL9 665 aa9.21□□□□□ -0.94
RBM39-238ENST00000493853 ARHGAP39Q9C0H5 1083 aa9.21□□□□□ -0.94
RBM39-238ENST00000493853 C1orf115Q9H7X2 142 aa9.21□□□□□ -0.94
RBM39-238ENST00000493853 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.21□□□□□ -0.94
RBM39-238ENST00000493853 ECM29Q5VYK3 1845 aa9.2□□□□□ -0.94
RBM39-238ENST00000493853 A0A0G2JLL6 359 aaPredicted RBP9.2□□□□□ -0.94
RBM39-238ENST00000493853 ZBTB7BO15156 539 aaPredicted RBP9.2□□□□□ -0.94
RBM39-238ENST00000493853 UPP2O95045 317 aa9.2□□□□□ -0.94
RBM39-238ENST00000493853 CYP2C8P10632 490 aa9.2□□□□□ -0.94
RBM39-238ENST00000493853 EN2P19622 333 aaPredicted RBP9.2□□□□□ -0.94
RBM39-238ENST00000493853 FCGRTP55899 365 aa9.2□□□□□ -0.94
RBM39-238ENST00000493853 CAP1Q01518 475 aa9.2□□□□□ -0.94
RBM39-238ENST00000493853 GPAT2Q6NUI2 795 aa9.2□□□□□ -0.94
RBM39-238ENST00000493853 PRRT2Q7Z6L0 340 aaPredicted RBP9.2□□□□□ -0.94
RBM39-238ENST00000493853 CRACR2BQ8N4Y2 399 aaPredicted RBP9.2□□□□□ -0.94
RBM39-238ENST00000493853 BANK1Q8NDB2 785 aa9.2□□□□□ -0.94
RBM39-238ENST00000493853 SH3TC2Q8TF17 1288 aa9.2□□□□□ -0.94
RBM39-238ENST00000493853 DBNDD2Q9BQY9 259 aa9.2□□□□□ -0.94
RBM39-238ENST00000493853 CCDC8Q9H0W5 538 aaPredicted RBP9.2□□□□□ -0.94
RBM39-238ENST00000493853 OSBPL5Q9H0X9 879 aaPredicted RBP9.2□□□□□ -0.94
RBM39-238ENST00000493853 DHX36Q9H2U1 1008 aaKnown RBP9.2□□□□□ -0.94
RBM39-238ENST00000493853 AATFQ9NY61 560 aaKnown RBP eCLIP9.2□□□□□ -0.94
RBM39-238ENST00000493853 SRRDQ9UH36 339 aa9.2□□□□□ -0.94
RBM39-238ENST00000493853 AFG3L2Q9Y4W6 797 aa9.2□□□□□ -0.94
RBM39-238ENST00000493853 FAM196BA6NMK8 535 aa9.19□□□□□ -0.94
RBM39-238ENST00000493853 USP17L5A8MUK1 530 aa9.19□□□□□ -0.94
RBM39-238ENST00000493853 IDH1O75874 414 aaKnown RBP9.19□□□□□ -0.94
RBM39-238ENST00000493853 GRK4P32298 578 aa9.19□□□□□ -0.94
RBM39-238ENST00000493853 ZAP70P43403 619 aa9.19□□□□□ -0.94
RBM39-238ENST00000493853 UBXN2AP68543 259 aa9.19□□□□□ -0.94
RBM39-238ENST00000493853 SPP2Q13103 211 aa9.19□□□□□ -0.94
RBM39-238ENST00000493853 PABPC4Q13310 644 aaKnown RBP eCLIP9.19□□□□□ -0.94
RBM39-238ENST00000493853 HSP90AB4PQ58FF6 505 aa9.19□□□□□ -0.94
RBM39-238ENST00000493853 C6orf118Q5T5N4 469 aa9.19□□□□□ -0.94
RBM39-238ENST00000493853 PPP1R26Q5T8A7 1209 aaPredicted RBP9.19□□□□□ -0.94
RBM39-238ENST00000493853 TREML4Q6UXN2 200 aa9.19□□□□□ -0.94
RBM39-238ENST00000493853 ERC1Q8IUD2 1116 aa9.19□□□□□ -0.94
RBM39-238ENST00000493853 SH3RF3Q8TEJ3 882 aaPredicted RBP9.19□□□□□ -0.94
RBM39-238ENST00000493853 ZNF384Q8TF68 577 aa9.19□□□□□ -0.94
RBM39-238ENST00000493853 TGFBRAP1Q8WUH2 860 aa9.19□□□□□ -0.94
RBM39-238ENST00000493853 GCC1Q96CN9 775 aa9.19□□□□□ -0.94
RBM39-238ENST00000493853 BCL11AQ9H165 835 aa9.19□□□□□ -0.94
RBM39-238ENST00000493853 AS3MTQ9HBK9 375 aa9.19□□□□□ -0.94
RBM39-238ENST00000493853 PGPEP1Q9NXJ5 209 aa9.19□□□□□ -0.94
RBM39-238ENST00000493853 PI4KBQ9UBF8 816 aa9.19□□□□□ -0.94
RBM39-238ENST00000493853 HERC5Q9UII4 1024 aaKnown RBP9.19□□□□□ -0.94
RBM39-238ENST00000493853 SLC45A1Q9Y2W3 748 aa9.19□□□□□ -0.94
RBM39-238ENST00000493853 NOP58Q9Y2X3 529 aaKnown RBP9.19□□□□□ -0.94
RBM39-238ENST00000493853 IGSF3O75054 1194 aa9.18□□□□□ -0.94
RBM39-238ENST00000493853 CYP2E1P05181 493 aaPredicted RBP9.18□□□□□ -0.94
RBM39-238ENST00000493853 HLA-DOAP06340 250 aa9.18□□□□□ -0.94
RBM39-238ENST00000493853 SLURP2P0DP57 97 aa9.18□□□□□ -0.94
RBM39-238ENST00000493853 RLBP1P12271 317 aa9.18□□□□□ -0.94
RBM39-238ENST00000493853 CYP7A1P22680 504 aa9.18□□□□□ -0.94
RBM39-238ENST00000493853 CAP2P40123 477 aa9.18□□□□□ -0.94
RBM39-238ENST00000493853 MOGSQ13724 837 aa9.18□□□□□ -0.94
RBM39-238ENST00000493853 MYPNQ86TC9 1320 aa9.18□□□□□ -0.94
RBM39-238ENST00000493853 CCDC84Q86UT8 332 aaPredicted RBP9.18□□□□□ -0.94
RBM39-238ENST00000493853 CERS3Q8IU89 383 aa9.18□□□□□ -0.94
RBM39-238ENST00000493853 FOXP4Q8IVH2 680 aaPredicted RBP9.18□□□□□ -0.94
RBM39-238ENST00000493853 MAPKAPK5Q8IW41 473 aa9.18□□□□□ -0.94
RBM39-238ENST00000493853 ZNF280CQ8ND82 737 aa9.18□□□□□ -0.94
RBM39-238ENST00000493853 PANK1Q8TE04 598 aa9.18□□□□□ -0.94
RBM39-238ENST00000493853 ARAP2Q8WZ64 1704 aa9.18□□□□□ -0.94
RBM39-238ENST00000493853 COA7Q96BR5 231 aa9.18□□□□□ -0.94
RBM39-238ENST00000493853 ZNF512BQ96KM6 892 aaPredicted RBP9.18□□□□□ -0.94
RBM39-238ENST00000493853 CHMP4BQ9H444 224 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms