RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 PCBP3P57721 371 aaKnown RBP7.79□□□□□ -1.16
SMC4-223ENST00000493695 SRSF3P84103 164 aaKnown RBP7.79□□□□□ -1.16
SMC4-223ENST00000493695 PWP1Q13610 501 aa7.79□□□□□ -1.16
SMC4-223ENST00000493695 RELTQ969Z4 430 aa7.79□□□□□ -1.16
SMC4-223ENST00000493695 POLR3KQ9Y2Y1 108 aaPredicted RBP7.79□□□□□ -1.16
SMC4-223ENST00000493695 RNF4P78317 190 aa7.78□□□□□ -1.16
SMC4-223ENST00000493695 ARSHQ5FYA8 562 aa7.78□□□□□ -1.16
SMC4-223ENST00000493695 RNF111Q6ZNA4 994 aa7.78□□□□□ -1.16
SMC4-223ENST00000493695 SND1Q7KZF4 910 aaKnown RBP eCLIP7.78□□□□□ -1.16
SMC4-223ENST00000493695 TMC4Q7Z404 712 aa7.78□□□□□ -1.16
SMC4-223ENST00000493695 FBXO27Q8NI29 283 aa7.78□□□□□ -1.16
SMC4-223ENST00000493695 CRELD1Q96HD1 420 aa7.78□□□□□ -1.16
SMC4-223ENST00000493695 TCFL5Q9UL49 500 aa7.78□□□□□ -1.16
SMC4-223ENST00000493695 IRAK3Q9Y616 596 aa7.78□□□□□ -1.16
SMC4-223ENST00000493695 DNAJA2O60884 412 aa7.77□□□□□ -1.17
SMC4-223ENST00000493695 SDHBP21912 280 aa7.77□□□□□ -1.17
SMC4-223ENST00000493695 MPP2Q14168 576 aa7.77□□□□□ -1.17
SMC4-223ENST00000493695 LINC01599Q8WXQ3 324 aa7.77□□□□□ -1.17
SMC4-223ENST00000493695 TRAIPQ9BWF2 469 aa7.77□□□□□ -1.17
SMC4-223ENST00000493695 SYPP08247 313 aa7.76□□□□□ -1.17
SMC4-223ENST00000493695 PI3P19957 117 aa7.76□□□□□ -1.17
SMC4-223ENST00000493695 SSPNQ14714 243 aa7.76□□□□□ -1.17
SMC4-223ENST00000493695 CWF19L2Q2TBE0 894 aaKnown RBP7.76□□□□□ -1.17
SMC4-223ENST00000493695 REC114Q7Z4M0 266 aa7.76□□□□□ -1.17
SMC4-223ENST00000493695 TMC3Q7Z5M5 1100 aa7.76□□□□□ -1.17
SMC4-223ENST00000493695 TMEM151BQ8IW70 566 aa7.76□□□□□ -1.17
SMC4-223ENST00000493695 USHBP1Q8N6Y0 703 aa7.76□□□□□ -1.17
SMC4-223ENST00000493695 ENOX1Q8TC92 643 aaKnown RBP7.76□□□□□ -1.17
SMC4-223ENST00000493695 SYTL5Q8TDW5 730 aaPredicted RBP7.76□□□□□ -1.17
SMC4-223ENST00000493695 TCTN2Q96GX1 697 aa7.76□□□□□ -1.17
SMC4-223ENST00000493695 RHOVQ96L33 236 aa7.76□□□□□ -1.17
SMC4-223ENST00000493695 C20orf173Q96LM9 149 aa7.76□□□□□ -1.17
SMC4-223ENST00000493695 GCM1Q9NP62 436 aa7.76□□□□□ -1.17
SMC4-223ENST00000493695 PRR36Q9H6K5 1346 aa7.76□□□□□ -1.17
SMC4-223ENST00000493695 MEIS1O00470 390 aa7.75□□□□□ -1.17
SMC4-223ENST00000493695 RGS13O14921 159 aa7.75□□□□□ -1.17
SMC4-223ENST00000493695 SHISA4Q96DD7 197 aa7.75□□□□□ -1.17
SMC4-223ENST00000493695 PCDHB14Q9Y5E9 798 aa7.75□□□□□ -1.17
SMC4-223ENST00000493695 NLRX1Q86UT6 975 aa7.74□□□□□ -1.17
SMC4-223ENST00000493695 DAGLBQ8NCG7 672 aa7.74□□□□□ -1.17
SMC4-223ENST00000493695 PANK1Q8TE04 598 aa7.74□□□□□ -1.17
SMC4-223ENST00000493695 MAP6Q96JE9 813 aa7.74□□□□□ -1.17
SMC4-223ENST00000493695 SIGLEC10Q96LC7 697 aa7.74□□□□□ -1.17
SMC4-223ENST00000493695 G6PC3Q9BUM1 346 aa7.74□□□□□ -1.17
SMC4-223ENST00000493695 RSRP1Q9BUV0 290 aa7.74□□□□□ -1.17
SMC4-223ENST00000493695 HDAC8Q9BY41 377 aa7.74□□□□□ -1.17
SMC4-223ENST00000493695 KRTAP4-11Q9BYQ6 195 aa7.74□□□□□ -1.17
SMC4-223ENST00000493695 SASH1O94885 1247 aa7.73□□□□□ -1.17
SMC4-223ENST00000493695 KIR2DL1P43626 348 aaPredicted RBP7.73□□□□□ -1.17
SMC4-223ENST00000493695 KIR2DL2P43627 348 aaPredicted RBP7.73□□□□□ -1.17
SMC4-223ENST00000493695 RTP1P59025 263 aa7.73□□□□□ -1.17
SMC4-223ENST00000493695 OLFML2BQ68BL8 750 aa7.73□□□□□ -1.17
SMC4-223ENST00000493695 ZPBP2Q6X784 338 aa7.73□□□□□ -1.17
SMC4-223ENST00000493695 ZNF655Q8N720 491 aaPredicted RBP7.73□□□□□ -1.17
SMC4-223ENST00000493695 ZNF512BQ96KM6 892 aaPredicted RBP7.73□□□□□ -1.17
SMC4-223ENST00000493695 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.73□□□□□ -1.17
SMC4-223ENST00000493695 KBTBD4Q9NVX7 518 aa7.73□□□□□ -1.17
SMC4-223ENST00000493695 ADAMTS20P59510 1910 aa7.73□□□□□ -1.17
SMC4-223ENST00000493695 SLC22A31A6NKX4 558 aa7.72□□□□□ -1.17
SMC4-223ENST00000493695 NRDCO43847 1150 aa7.72□□□□□ -1.17
SMC4-223ENST00000493695 UBOX5O94941 541 aa7.72□□□□□ -1.17
SMC4-223ENST00000493695 POLR2BP30876 1174 aaKnown RBP7.72□□□□□ -1.17
SMC4-223ENST00000493695 ITGAEP38570 1179 aa7.72□□□□□ -1.17
SMC4-223ENST00000493695 SNW1Q13573 536 aaKnown RBP7.72□□□□□ -1.17
SMC4-223ENST00000493695 NFIXQ14938 502 aa7.72□□□□□ -1.17
SMC4-223ENST00000493695 FAM196AQ6ZSG2 479 aa7.72□□□□□ -1.17
SMC4-223ENST00000493695 BRMS1Q9HCU9 246 aa7.72□□□□□ -1.17
SMC4-223ENST00000493695 MBD1Q9UIS9 605 aaPredicted RBP7.72□□□□□ -1.17
SMC4-223ENST00000493695 TAF6LQ9Y6J9 622 aa7.72□□□□□ -1.17
SMC4-223ENST00000493695 FOXD2O60548 495 aaPredicted RBP7.71□□□□□ -1.18
SMC4-223ENST00000493695 PRAMEF1O95521 474 aa7.71□□□□□ -1.18
SMC4-223ENST00000493695 VIPR1P32241 457 aa7.71□□□□□ -1.18
SMC4-223ENST00000493695 ARL4AP40617 200 aa7.71□□□□□ -1.18
SMC4-223ENST00000493695 AFF3P51826 1226 aaKnown RBP7.71□□□□□ -1.18
SMC4-223ENST00000493695 EPHB3P54753 998 aa7.71□□□□□ -1.18
SMC4-223ENST00000493695 VMACQ2NL98 169 aa7.71□□□□□ -1.18
SMC4-223ENST00000493695 MARCH10Q8NA82 808 aaPredicted RBP7.71□□□□□ -1.18
SMC4-223ENST00000493695 HHIPL1Q96JK4 782 aa7.71□□□□□ -1.18
SMC4-223ENST00000493695 CDADC1Q9BWV3 514 aa7.71□□□□□ -1.18
SMC4-223ENST00000493695 MKRN2Q9H000 416 aaKnown RBP7.71□□□□□ -1.18
SMC4-223ENST00000493695 CRTAC1Q9NQ79 661 aa7.71□□□□□ -1.18
SMC4-223ENST00000493695 FBXL21Q9UKT6 434 aa7.71□□□□□ -1.18
SMC4-223ENST00000493695 A0A0G2JLL6 359 aaPredicted RBP7.7□□□□□ -1.18
SMC4-223ENST00000493695 NOTOA8MTQ0 251 aa7.7□□□□□ -1.18
SMC4-223ENST00000493695 CLEC3AO75596 197 aa7.7□□□□□ -1.18
SMC4-223ENST00000493695 EFEMP2O95967 443 aa7.7□□□□□ -1.18
SMC4-223ENST00000493695 MCM4P33991 863 aa7.7□□□□□ -1.18
SMC4-223ENST00000493695 TAGLNQ01995 201 aaKnown RBP7.7□□□□□ -1.18
SMC4-223ENST00000493695 NBPF9Q3BBW0 867 aa7.7□□□□□ -1.18
SMC4-223ENST00000493695 NBPF12Q5TAG4 269 aaPredicted RBP7.7□□□□□ -1.18
SMC4-223ENST00000493695 OVOS1Q6IE37 1185 aa7.7□□□□□ -1.18
SMC4-223ENST00000493695 VWCEQ96DN2 955 aa7.7□□□□□ -1.18
SMC4-223ENST00000493695 GMIPQ9P107 970 aa7.7□□□□□ -1.18
SMC4-223ENST00000493695 MINPP1Q9UNW1 487 aa7.7□□□□□ -1.18
SMC4-223ENST00000493695 SUPT16HQ9Y5B9 1047 aaKnown RBP7.7□□□□□ -1.18
SMC4-223ENST00000493695 TMEM82A0PJX8 343 aa7.69□□□□□ -1.18
SMC4-223ENST00000493695 TRIM13O60858 407 aa7.69□□□□□ -1.18
SMC4-223ENST00000493695 MPOP05164 745 aa7.69□□□□□ -1.18
SMC4-223ENST00000493695 PNLIPP16233 465 aa7.69□□□□□ -1.18
SMC4-223ENST00000493695 FBXL19Q6PCT2 694 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms