RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 DOCK3Q8IZD9 2030 aa8.25□□□□□ -1.09
TOP3A-207ENST00000493648 PEX10O60683 326 aa8.25□□□□□ -1.09
TOP3A-207ENST00000493648 CNMDO75829 334 aa8.25□□□□□ -1.09
TOP3A-207ENST00000493648 CHMLP26374 656 aa8.25□□□□□ -1.09
TOP3A-207ENST00000493648 MLLT1Q03111 559 aaPredicted RBP8.25□□□□□ -1.09
TOP3A-207ENST00000493648 PLS1Q14651 629 aa8.25□□□□□ -1.09
TOP3A-207ENST00000493648 IMMTQ16891 758 aaKnown RBP8.25□□□□□ -1.09
TOP3A-207ENST00000493648 FAM83BQ5T0W9 1011 aa8.25□□□□□ -1.09
TOP3A-207ENST00000493648 AKNAD1Q5T1N1 836 aa8.25□□□□□ -1.09
TOP3A-207ENST00000493648 WDR78Q5VTH9 848 aa8.25□□□□□ -1.09
TOP3A-207ENST00000493648 GPR142Q7Z601 462 aa8.25□□□□□ -1.09
TOP3A-207ENST00000493648 PLEKHH3Q7Z736 793 aa8.25□□□□□ -1.09
TOP3A-207ENST00000493648 GMCL1P1Q8NEA9 526 aa8.25□□□□□ -1.09
TOP3A-207ENST00000493648 STAG1Q8WVM7 1258 aa8.25□□□□□ -1.09
TOP3A-207ENST00000493648 SOCS4Q8WXH5 440 aa8.25□□□□□ -1.09
TOP3A-207ENST00000493648 ESR2Q92731 530 aa8.25□□□□□ -1.09
TOP3A-207ENST00000493648 BTBD7Q9P203 1132 aa8.25□□□□□ -1.09
TOP3A-207ENST00000493648 GJD2Q9UKL4 321 aa8.25□□□□□ -1.09
TOP3A-207ENST00000493648 STX8Q9UNK0 236 aa8.25□□□□□ -1.09
TOP3A-207ENST00000493648 IVNS1ABPQ9Y6Y0 642 aa8.25□□□□□ -1.09
TOP3A-207ENST00000493648 RAD50Q92878 1312 aa8.25□□□□□ -1.09
TOP3A-207ENST00000493648 GREB1LQ9C091 1923 aaPredicted RBP8.25□□□□□ -1.09
TOP3A-207ENST00000493648 MYH4Q9Y623 1939 aa8.25□□□□□ -1.09
TOP3A-207ENST00000493648 PLIN4Q96Q06 1357 aa8.24□□□□□ -1.09
TOP3A-207ENST00000493648 STRNO43815 780 aa8.24□□□□□ -1.09
TOP3A-207ENST00000493648 ZBED4O75132 1171 aa8.24□□□□□ -1.09
TOP3A-207ENST00000493648 NDUFB10O96000 172 aa8.24□□□□□ -1.09
TOP3A-207ENST00000493648 MYCP01106 439 aaPredicted RBP8.24□□□□□ -1.09
TOP3A-207ENST00000493648 BMP3P12645 472 aa8.24□□□□□ -1.09
TOP3A-207ENST00000493648 RGS2P41220 211 aa8.24□□□□□ -1.09
TOP3A-207ENST00000493648 CCDC178Q5BJE1 867 aa8.24□□□□□ -1.09
TOP3A-207ENST00000493648 SLFN13Q68D06 897 aa8.24□□□□□ -1.09
TOP3A-207ENST00000493648 POTEEQ6S8J3 1075 aa8.24□□□□□ -1.09
TOP3A-207ENST00000493648 KIAA1211Q6ZU35 1233 aa8.24□□□□□ -1.09
TOP3A-207ENST00000493648 TRMT44Q8IYL2 757 aaKnown RBP8.24□□□□□ -1.09
TOP3A-207ENST00000493648 LRRC47Q8N1G4 583 aaKnown RBP8.24□□□□□ -1.09
TOP3A-207ENST00000493648 PRPF38AQ8NAV1 312 aaKnown RBP8.24□□□□□ -1.09
TOP3A-207ENST00000493648 ATG4CQ96DT6 458 aa8.24□□□□□ -1.09
TOP3A-207ENST00000493648 TTC14Q96N46 770 aa8.24□□□□□ -1.09
TOP3A-207ENST00000493648 SLF1Q9BQI6 1058 aa8.24□□□□□ -1.09
TOP3A-207ENST00000493648 MOV10L1Q9BXT6 1211 aaKnown RBP8.24□□□□□ -1.09
TOP3A-207ENST00000493648 SPATC1LQ9H0A9 340 aa8.24□□□□□ -1.09
TOP3A-207ENST00000493648 PORCNQ9H237 461 aa8.24□□□□□ -1.09
TOP3A-207ENST00000493648 MROH8Q9H579 483 aa8.24□□□□□ -1.09
TOP3A-207ENST00000493648 IL17RBQ9NRM6 502 aa8.24□□□□□ -1.09
TOP3A-207ENST00000493648 TCP11L1Q9NUJ3 509 aa8.24□□□□□ -1.09
TOP3A-207ENST00000493648 FEM1BQ9UK73 627 aa8.24□□□□□ -1.09
TOP3A-207ENST00000493648 PPP1R9AQ9ULJ8 1098 aa8.24□□□□□ -1.09
TOP3A-207ENST00000493648 ADAMTS5Q9UNA0 930 aa8.24□□□□□ -1.09
TOP3A-207ENST00000493648 CTDP1Q9Y5B0 961 aaPredicted RBP8.24□□□□□ -1.09
TOP3A-207ENST00000493648 TACC3Q9Y6A5 838 aa8.24□□□□□ -1.09
TOP3A-207ENST00000493648 SLC15A5A6NIM6 579 aa8.23□□□□□ -1.09
TOP3A-207ENST00000493648 VWA5AO00534 786 aa8.23□□□□□ -1.09
TOP3A-207ENST00000493648 SGSM2O43147 1006 aa8.23□□□□□ -1.09
TOP3A-207ENST00000493648 NMT2O60551 498 aa8.23□□□□□ -1.09
TOP3A-207ENST00000493648 SLC25A27O95847 323 aa8.23□□□□□ -1.09
TOP3A-207ENST00000493648 FDX1P10109 184 aa8.23□□□□□ -1.09
TOP3A-207ENST00000493648 XRCC5P13010 732 aaKnown RBP8.23□□□□□ -1.09
TOP3A-207ENST00000493648 ELNP15502 786 aa8.23□□□□□ -1.09
TOP3A-207ENST00000493648 CYP2B6P20813 491 aa8.23□□□□□ -1.09
TOP3A-207ENST00000493648 PTPREP23469 700 aa8.23□□□□□ -1.09
TOP3A-207ENST00000493648 MCCP23508 829 aa8.23□□□□□ -1.09
TOP3A-207ENST00000493648 STAT3P40763 770 aa8.23□□□□□ -1.09
TOP3A-207ENST00000493648 SLC1A4P43007 532 aa8.23□□□□□ -1.09
TOP3A-207ENST00000493648 MORN1Q5T089 497 aa8.23□□□□□ -1.09
TOP3A-207ENST00000493648 ERICH6BQ5W0A0 696 aa8.23□□□□□ -1.09
TOP3A-207ENST00000493648 RCSD1Q6JBY9 416 aa8.23□□□□□ -1.09
TOP3A-207ENST00000493648 NCAPG2Q86XI2 1143 aa8.23□□□□□ -1.09
TOP3A-207ENST00000493648 SHCBP1Q8NEM2 672 aa8.23□□□□□ -1.09
TOP3A-207ENST00000493648 NKX2-3Q8TAU0 364 aa8.23□□□□□ -1.09
TOP3A-207ENST00000493648 CHURC1Q8WUH1 139 aa8.23□□□□□ -1.09
TOP3A-207ENST00000493648 GMCL1Q96IK5 515 aa8.23□□□□□ -1.09
TOP3A-207ENST00000493648 NUP88Q99567 741 aaPredicted RBP8.23□□□□□ -1.09
TOP3A-207ENST00000493648 KRT23Q9C075 422 aa8.23□□□□□ -1.09
TOP3A-207ENST00000493648 RNF208Q9H0X6 261 aa8.23□□□□□ -1.09
TOP3A-207ENST00000493648 CNNM2Q9H8M5 875 aa8.23□□□□□ -1.09
TOP3A-207ENST00000493648 FBXO28Q9NVF7 368 aa8.23□□□□□ -1.09
TOP3A-207ENST00000493648 SLC5A4Q9NY91 659 aa8.23□□□□□ -1.09
TOP3A-207ENST00000493648 ISY1Q9ULR0 285 aaKnown RBP8.23□□□□□ -1.09
TOP3A-207ENST00000493648 POTEFA5A3E0 1075 aa8.22□□□□□ -1.09
TOP3A-207ENST00000493648 TMEM232C9JQI7 657 aa8.22□□□□□ -1.09
TOP3A-207ENST00000493648 HMGCRP04035 888 aa8.22□□□□□ -1.09
TOP3A-207ENST00000493648 INHAP05111 366 aa8.22□□□□□ -1.09
TOP3A-207ENST00000493648 TOP1P11387 765 aaKnown RBP8.22□□□□□ -1.09
TOP3A-207ENST00000493648 CCL5P13501 91 aa8.22□□□□□ -1.09
TOP3A-207ENST00000493648 CAPN2P17655 700 aa8.22□□□□□ -1.09
TOP3A-207ENST00000493648 ERCC3P19447 782 aa8.22□□□□□ -1.09
TOP3A-207ENST00000493648 COPB2P35606 906 aa8.22□□□□□ -1.09
TOP3A-207ENST00000493648 NOVP48745 357 aa8.22□□□□□ -1.09
TOP3A-207ENST00000493648 TRDNQ13061 729 aa8.22□□□□□ -1.09
TOP3A-207ENST00000493648 IKQ13123 557 aaPredicted RBP8.22□□□□□ -1.09
TOP3A-207ENST00000493648 MAP2K5Q13163 448 aa8.22□□□□□ -1.09
TOP3A-207ENST00000493648 TMEM132BQ14DG7 1078 aa8.22□□□□□ -1.09
TOP3A-207ENST00000493648 MTFR1Q15390 333 aa8.22□□□□□ -1.09
TOP3A-207ENST00000493648 BMP2KLQ5H9B9 411 aa8.22□□□□□ -1.09
TOP3A-207ENST00000493648 CASC1Q6TDU7 716 aa8.22□□□□□ -1.09
TOP3A-207ENST00000493648 DPP9Q86TI2 863 aa8.22□□□□□ -1.09
TOP3A-207ENST00000493648 FAM160B2Q86V87 743 aa8.22□□□□□ -1.09
TOP3A-207ENST00000493648 IQCA1Q86XH1 822 aa8.22□□□□□ -1.09
TOP3A-207ENST00000493648 DGKHQ86XP1 1220 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms