RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 ERVK-9P63128 1117 aa15.05■□□□□ -0
CLIP2-209ENST00000493166 ERVK-24P63145 666 aa15.05■□□□□ -0
CLIP2-209ENST00000493166 CCDC178Q5BJE1 867 aa15.05■□□□□ -0
CLIP2-209ENST00000493166 FBXO46Q6PJ61 603 aaPredicted RBP15.05■□□□□ -0
CLIP2-209ENST00000493166 RALYLQ86SE5 291 aaKnown RBP15.05■□□□□ -0
CLIP2-209ENST00000493166 TRIM47Q96LD4 638 aa15.05■□□□□ -0
CLIP2-209ENST00000493166 TTC14Q96N46 770 aa15.05■□□□□ -0
CLIP2-209ENST00000493166 ZSWIM5Q9P217 1185 aa15.05■□□□□ -0
CLIP2-209ENST00000493166 RBPJLQ9UBG7 517 aa15.05■□□□□ -0
CLIP2-209ENST00000493166 MTMR7Q9Y216 660 aa15.05■□□□□ -0
CLIP2-209ENST00000493166 E7EWF7 191 aa15.04■□□□□ -0
CLIP2-209ENST00000493166 TNPO2O14787 897 aaKnown RBP15.04■□□□□ -0
CLIP2-209ENST00000493166 BMP3P12645 472 aa15.04■□□□□ -0
CLIP2-209ENST00000493166 HOXD10P28358 340 aa15.04■□□□□ -0
CLIP2-209ENST00000493166 DSG3P32926 999 aa15.04■□□□□ -0
CLIP2-209ENST00000493166 CCAR1Q8IX12 1150 aaKnown RBP15.04■□□□□ -0
CLIP2-209ENST00000493166 NCOA7Q8NI08 942 aa15.04■□□□□ -0
CLIP2-209ENST00000493166 CHMP4CQ96CF2 233 aa15.04■□□□□ -0
CLIP2-209ENST00000493166 ATG4CQ96DT6 458 aa15.04■□□□□ -0
CLIP2-209ENST00000493166 GMCL1Q96IK5 515 aa15.04■□□□□ -0
CLIP2-209ENST00000493166 ZSCAN10Q96SZ4 725 aaPredicted RBP15.04■□□□□ -0
CLIP2-209ENST00000493166 TMEM47Q9BQJ4 181 aa15.04■□□□□ -0
CLIP2-209ENST00000493166 UBAC1Q9BSL1 405 aa15.04■□□□□ -0
CLIP2-209ENST00000493166 FBXO28Q9NVF7 368 aa15.04■□□□□ -0
CLIP2-209ENST00000493166 TAF6LQ9Y6J9 622 aa15.04■□□□□ -0
CLIP2-209ENST00000493166 TNKSO95271 1327 aa15.03■□□□□ -0
CLIP2-209ENST00000493166 SLC27A2O14975 620 aa15.03■□□□□ -0
CLIP2-209ENST00000493166 CNMDO75829 334 aa15.03■□□□□ -0
CLIP2-209ENST00000493166 MCCP23508 829 aa15.03■□□□□ -0
CLIP2-209ENST00000493166 SLC1A4P43007 532 aa15.03■□□□□ -0
CLIP2-209ENST00000493166 CCNA1P78396 465 aa15.03■□□□□ -0
CLIP2-209ENST00000493166 NECTIN1Q15223 517 aa15.03■□□□□ -0
CLIP2-209ENST00000493166 RNF20Q5VTR2 975 aa15.03■□□□□ -0
CLIP2-209ENST00000493166 CREB3L3Q68CJ9 461 aa15.03■□□□□ -0
CLIP2-209ENST00000493166 RCSD1Q6JBY9 416 aa15.03■□□□□ -0
CLIP2-209ENST00000493166 POTEEQ6S8J3 1075 aa15.03■□□□□ -0
CLIP2-209ENST00000493166 STOX1Q6ZVD7 989 aa15.03■□□□□ -0
CLIP2-209ENST00000493166 DGKHQ86XP1 1220 aa15.03■□□□□ -0
CLIP2-209ENST00000493166 MB21D1Q8N884 522 aa15.03■□□□□ -0
CLIP2-209ENST00000493166 SLF1Q9BQI6 1058 aa15.03■□□□□ -0
CLIP2-209ENST00000493166 BTBD7Q9P203 1132 aa15.03■□□□□ -0
CLIP2-209ENST00000493166 PPP1R9AQ9ULJ8 1098 aa15.03■□□□□ -0
CLIP2-209ENST00000493166 PTPN22Q9Y2R2 807 aa15.03■□□□□ -0
CLIP2-209ENST00000493166 PLXNA1Q9UIW2 1896 aa15.03■□□□□ -0
CLIP2-209ENST00000493166 REC8O95072 547 aa15.02■□□□□ -0
CLIP2-209ENST00000493166 PRMT2P55345 433 aa15.02■□□□□ -0
CLIP2-209ENST00000493166 IKQ13123 557 aaPredicted RBP15.02■□□□□ -0
CLIP2-209ENST00000493166 CCDC96Q2M329 555 aa15.02■□□□□ -0
CLIP2-209ENST00000493166 Q3C1V9 767 aa15.02■□□□□ -0
CLIP2-209ENST00000493166 CYB5R4Q7L1T6 521 aa15.02■□□□□ -0
CLIP2-209ENST00000493166 ENAHQ8N8S7 591 aaPredicted RBP15.02■□□□□ -0
CLIP2-209ENST00000493166 DCAF4Q8WV16 495 aa15.02■□□□□ -0
CLIP2-209ENST00000493166 COA7Q96BR5 231 aa15.02■□□□□ -0
CLIP2-209ENST00000493166 CWC22Q9HCG8 908 aaKnown RBP15.02■□□□□ -0
CLIP2-209ENST00000493166 SRRDQ9UH36 339 aa15.02■□□□□ -0
CLIP2-209ENST00000493166 FEM1BQ9UK73 627 aa15.02■□□□□ -0
CLIP2-209ENST00000493166 ZNF236Q9UL36 1845 aa15.01□□□□□ -0.01
CLIP2-209ENST00000493166 TMEM232C9JQI7 657 aa15.01□□□□□ -0.01
CLIP2-209ENST00000493166 MAPK4P31152 587 aa15.01□□□□□ -0.01
CLIP2-209ENST00000493166 STAT2P52630 851 aa15.01□□□□□ -0.01
CLIP2-209ENST00000493166 PRKCZQ05513 592 aa15.01□□□□□ -0.01
CLIP2-209ENST00000493166 PLS1Q14651 629 aa15.01□□□□□ -0.01
CLIP2-209ENST00000493166 WDR78Q5VTH9 848 aa15.01□□□□□ -0.01
CLIP2-209ENST00000493166 KCTD1Q719H9 257 aa15.01□□□□□ -0.01
CLIP2-209ENST00000493166 RASGRP2Q7LDG7 609 aa15.01□□□□□ -0.01
CLIP2-209ENST00000493166 PRPF38AQ8NAV1 312 aaKnown RBP15.01□□□□□ -0.01
CLIP2-209ENST00000493166 KIFC2Q96AC6 838 aa15.01□□□□□ -0.01
CLIP2-209ENST00000493166 ABHD8Q96I13 439 aa15.01□□□□□ -0.01
CLIP2-209ENST00000493166 SPATC1LQ9H0A9 340 aa15.01□□□□□ -0.01
CLIP2-209ENST00000493166 PORCNQ9H237 461 aa15.01□□□□□ -0.01
CLIP2-209ENST00000493166 KAT14Q9H8E8 782 aa15.01□□□□□ -0.01
CLIP2-209ENST00000493166 ADAMTS5Q9UNA0 930 aa15.01□□□□□ -0.01
CLIP2-209ENST00000493166 HPS5Q9UPZ3 1129 aa15.01□□□□□ -0.01
CLIP2-209ENST00000493166 PTCH2Q9Y6C5 1203 aa15.01□□□□□ -0.01
CLIP2-209ENST00000493166 ERICH2A1L162 156 aa15□□□□□ -0.01
CLIP2-209ENST00000493166 VWA5AO00534 786 aa15□□□□□ -0.01
CLIP2-209ENST00000493166 TMEM132BQ14DG7 1078 aa15□□□□□ -0.01
CLIP2-209ENST00000493166 SART3Q15020 963 aaKnown RBP15□□□□□ -0.01
CLIP2-209ENST00000493166 IFIT1BQ5T764 474 aaKnown RBP15□□□□□ -0.01
CLIP2-209ENST00000493166 FAM160B2Q86V87 743 aa15□□□□□ -0.01
CLIP2-209ENST00000493166 PNMA1Q8ND90 353 aa15□□□□□ -0.01
CLIP2-209ENST00000493166 RAET1EQ8TD07 263 aa15□□□□□ -0.01
CLIP2-209ENST00000493166 CHURC1Q8WUH1 139 aa15□□□□□ -0.01
CLIP2-209ENST00000493166 ANKS1AQ92625 1134 aa15□□□□□ -0.01
CLIP2-209ENST00000493166 GABRQQ9UN88 632 aa15□□□□□ -0.01
CLIP2-209ENST00000493166 CTDP1Q9Y5B0 961 aaPredicted RBP15□□□□□ -0.01
CLIP2-209ENST00000493166 FRMPD2Q68DX3 1309 aaPredicted RBP14.99□□□□□ -0.01
CLIP2-209ENST00000493166 SMCHD1A6NHR9 2005 aa14.99□□□□□ -0.01
CLIP2-209ENST00000493166 IFIT3O14879 490 aaKnown RBP14.99□□□□□ -0.01
CLIP2-209ENST00000493166 PDHBP11177 359 aa14.99□□□□□ -0.01
CLIP2-209ENST00000493166 ZKSCAN1P17029 563 aaPredicted RBP14.99□□□□□ -0.01
CLIP2-209ENST00000493166 SEC23AQ15436 765 aa14.99□□□□□ -0.01
CLIP2-209ENST00000493166 CHST3Q7LGC8 479 aa14.99□□□□□ -0.01
CLIP2-209ENST00000493166 GPR142Q7Z601 462 aa14.99□□□□□ -0.01
CLIP2-209ENST00000493166 PLEKHH3Q7Z736 793 aa14.99□□□□□ -0.01
CLIP2-209ENST00000493166 MB21D2Q8IYB1 491 aaPredicted RBP14.99□□□□□ -0.01
CLIP2-209ENST00000493166 MOV10L1Q9BXT6 1211 aaKnown RBP14.99□□□□□ -0.01
CLIP2-209ENST00000493166 RBBP6Q7Z6E9 1792 aaKnown RBP14.98□□□□□ -0.01
CLIP2-209ENST00000493166 PLA2G6O60733 806 aa14.98□□□□□ -0.01
CLIP2-209ENST00000493166 ZBED4O75132 1171 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms