RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 TNKSO95271 1327 aa16.42■□□□□ 0.22
CCM2-217ENST00000492883 ERICH2A1L162 156 aa16.41■□□□□ 0.22
CCM2-217ENST00000492883 IFIT3O14879 490 aaKnown RBP16.41■□□□□ 0.22
CCM2-217ENST00000492883 HOXD10P28358 340 aa16.41■□□□□ 0.22
CCM2-217ENST00000492883 SART3Q15020 963 aaKnown RBP16.41■□□□□ 0.22
CCM2-217ENST00000492883 LBX2Q6XYB7 198 aa16.41■□□□□ 0.22
CCM2-217ENST00000492883 CHST3Q7LGC8 479 aa16.41■□□□□ 0.22
CCM2-217ENST00000492883 OTOP1Q7RTM1 612 aa16.41■□□□□ 0.22
CCM2-217ENST00000492883 ENAHQ8N8S7 591 aaPredicted RBP16.41■□□□□ 0.22
CCM2-217ENST00000492883 ANKS1AQ92625 1134 aa16.41■□□□□ 0.22
CCM2-217ENST00000492883 ATG4CQ96DT6 458 aa16.41■□□□□ 0.22
CCM2-217ENST00000492883 GMCL1Q96IK5 515 aa16.41■□□□□ 0.22
CCM2-217ENST00000492883 FEM1BQ9UK73 627 aa16.41■□□□□ 0.22
CCM2-217ENST00000492883 MYPNQ86TC9 1320 aa16.41■□□□□ 0.22
CCM2-217ENST00000492883 TMEM232C9JQI7 657 aa16.4■□□□□ 0.22
CCM2-217ENST00000492883 ERVK-9P63128 1117 aa16.4■□□□□ 0.22
CCM2-217ENST00000492883 ERVK-24P63145 666 aa16.4■□□□□ 0.22
CCM2-217ENST00000492883 IKQ13123 557 aaPredicted RBP16.4■□□□□ 0.22
CCM2-217ENST00000492883 PKN2Q16513 984 aaKnown RBP16.4■□□□□ 0.22
CCM2-217ENST00000492883 CCDC96Q2M329 555 aa16.4■□□□□ 0.22
CCM2-217ENST00000492883 Q3C1V9 767 aa16.4■□□□□ 0.22
CCM2-217ENST00000492883 IFIT1BQ5T764 474 aaKnown RBP16.4■□□□□ 0.22
CCM2-217ENST00000492883 POTEEQ6S8J3 1075 aa16.4■□□□□ 0.22
CCM2-217ENST00000492883 KCTD1Q719H9 257 aa16.4■□□□□ 0.22
CCM2-217ENST00000492883 TNS4Q8IZW8 715 aa16.4■□□□□ 0.22
CCM2-217ENST00000492883 MB21D1Q8N884 522 aa16.4■□□□□ 0.22
CCM2-217ENST00000492883 PRPF38AQ8NAV1 312 aaKnown RBP16.4■□□□□ 0.22
CCM2-217ENST00000492883 CHURC1Q8WUH1 139 aa16.4■□□□□ 0.22
CCM2-217ENST00000492883 DCAF4Q8WV16 495 aa16.4■□□□□ 0.22
CCM2-217ENST00000492883 SLF1Q9BQI6 1058 aa16.4■□□□□ 0.22
CCM2-217ENST00000492883 CWC22Q9HCG8 908 aaKnown RBP16.4■□□□□ 0.22
CCM2-217ENST00000492883 BTBD7Q9P203 1132 aa16.4■□□□□ 0.22
CCM2-217ENST00000492883 PPP1R9AQ9ULJ8 1098 aa16.4■□□□□ 0.22
CCM2-217ENST00000492883 CTDP1Q9Y5B0 961 aaPredicted RBP16.4■□□□□ 0.22
CCM2-217ENST00000492883 TNPO2O14787 897 aaKnown RBP16.39■□□□□ 0.21
CCM2-217ENST00000492883 GNRH1P01148 92 aa16.39■□□□□ 0.21
CCM2-217ENST00000492883 CTGFP29279 349 aa16.39■□□□□ 0.21
CCM2-217ENST00000492883 MCM5P33992 734 aa16.39■□□□□ 0.21
CCM2-217ENST00000492883 HSPA4P34932 840 aa16.39■□□□□ 0.21
CCM2-217ENST00000492883 CCNA1P78396 465 aa16.39■□□□□ 0.21
CCM2-217ENST00000492883 CAP1Q01518 475 aa16.39■□□□□ 0.21
CCM2-217ENST00000492883 KRT32Q14532 448 aa16.39■□□□□ 0.21
CCM2-217ENST00000492883 PLS1Q14651 629 aa16.39■□□□□ 0.21
CCM2-217ENST00000492883 MB21D2Q8IYB1 491 aaPredicted RBP16.39■□□□□ 0.21
CCM2-217ENST00000492883 RASEFQ8IZ41 740 aa16.39■□□□□ 0.21
CCM2-217ENST00000492883 PNMA1Q8ND90 353 aa16.39■□□□□ 0.21
CCM2-217ENST00000492883 KIFC2Q96AC6 838 aa16.39■□□□□ 0.21
CCM2-217ENST00000492883 TRIM47Q96LD4 638 aa16.39■□□□□ 0.21
CCM2-217ENST00000492883 NEK1Q96PY6 1258 aa16.39■□□□□ 0.21
CCM2-217ENST00000492883 MCOLN1Q9GZU1 580 aa16.39■□□□□ 0.21
CCM2-217ENST00000492883 EPB41L2O43491 1005 aaKnown RBP16.38■□□□□ 0.21
CCM2-217ENST00000492883 EIF5BO60841 1220 aaKnown RBP16.38■□□□□ 0.21
CCM2-217ENST00000492883 ZBED4O75132 1171 aa16.38■□□□□ 0.21
CCM2-217ENST00000492883 CNMDO75829 334 aa16.38■□□□□ 0.21
CCM2-217ENST00000492883 STAT2P52630 851 aa16.38■□□□□ 0.21
CCM2-217ENST00000492883 WTAPQ15007 396 aa16.38■□□□□ 0.21
CCM2-217ENST00000492883 TSGA10IPQ3SY00 556 aa16.38■□□□□ 0.21
CCM2-217ENST00000492883 TMEM67Q5HYA8 995 aa16.38■□□□□ 0.21
CCM2-217ENST00000492883 FAM160B2Q86V87 743 aa16.38■□□□□ 0.21
CCM2-217ENST00000492883 COA7Q96BR5 231 aa16.38■□□□□ 0.21
CCM2-217ENST00000492883 USP26Q9BXU7 913 aa16.38■□□□□ 0.21
CCM2-217ENST00000492883 GPCPD1Q9NPB8 672 aa16.38■□□□□ 0.21
CCM2-217ENST00000492883 LOC285556D6RIA3 1793 aa16.38■□□□□ 0.21
CCM2-217ENST00000492883 VWA5AO00534 786 aa16.37■□□□□ 0.21
CCM2-217ENST00000492883 PRC1O43663 620 aa16.37■□□□□ 0.21
CCM2-217ENST00000492883 PDHBP11177 359 aa16.37■□□□□ 0.21
CCM2-217ENST00000492883 MAPK4P31152 587 aa16.37■□□□□ 0.21
CCM2-217ENST00000492883 ANTXR2P58335 489 aa16.37■□□□□ 0.21
CCM2-217ENST00000492883 SEC23AQ15436 765 aa16.37■□□□□ 0.21
CCM2-217ENST00000492883 WDR78Q5VTH9 848 aa16.37■□□□□ 0.21
CCM2-217ENST00000492883 RASGRP2Q7LDG7 609 aa16.37■□□□□ 0.21
CCM2-217ENST00000492883 SPATC1LQ9H0A9 340 aa16.37■□□□□ 0.21
CCM2-217ENST00000492883 ADAMTS5Q9UNA0 930 aa16.37■□□□□ 0.21
CCM2-217ENST00000492883 PTPN22Q9Y2R2 807 aa16.37■□□□□ 0.21
CCM2-217ENST00000492883 FRMPD2Q68DX3 1309 aaPredicted RBP16.37■□□□□ 0.21
CCM2-217ENST00000492883 PLA2G6O60733 806 aa16.36■□□□□ 0.21
CCM2-217ENST00000492883 TMEM132BQ14DG7 1078 aa16.36■□□□□ 0.21
CCM2-217ENST00000492883 FBXO46Q6PJ61 603 aaPredicted RBP16.36■□□□□ 0.21
CCM2-217ENST00000492883 IGDCC4Q8TDY8 1250 aa16.36■□□□□ 0.21
CCM2-217ENST00000492883 TMEM87BQ96K49 555 aa16.36■□□□□ 0.21
CCM2-217ENST00000492883 MTA3Q9BTC8 594 aa16.36■□□□□ 0.21
CCM2-217ENST00000492883 PORCNQ9H237 461 aa16.36■□□□□ 0.21
CCM2-217ENST00000492883 SRRDQ9UH36 339 aa16.36■□□□□ 0.21
CCM2-217ENST00000492883 PTPRFP10586 1907 aa16.35■□□□□ 0.21
CCM2-217ENST00000492883 GREB1LQ9C091 1923 aaPredicted RBP16.35■□□□□ 0.21
CCM2-217ENST00000492883 SNHG28P0DPA3 235 aa16.35■□□□□ 0.21
CCM2-217ENST00000492883 FDX1P10109 184 aa16.35■□□□□ 0.21
CCM2-217ENST00000492883 SLC16A2P36021 539 aa16.35■□□□□ 0.21
CCM2-217ENST00000492883 STAT3P40763 770 aa16.35■□□□□ 0.21
CCM2-217ENST00000492883 SLC4A3P48751 1232 aa16.35■□□□□ 0.21
CCM2-217ENST00000492883 PRMT2P55345 433 aa16.35■□□□□ 0.21
CCM2-217ENST00000492883 ZNF543Q08ER8 600 aa16.35■□□□□ 0.21
CCM2-217ENST00000492883 ADCK5Q3MIX3 580 aa16.35■□□□□ 0.21
CCM2-217ENST00000492883 GPATCH4Q5T3I0 446 aaKnown RBP16.35■□□□□ 0.21
CCM2-217ENST00000492883 TTBK2Q6IQ55 1244 aa16.35■□□□□ 0.21
CCM2-217ENST00000492883 NFXL1Q6ZNB6 911 aa16.35■□□□□ 0.21
CCM2-217ENST00000492883 DHX32Q7L7V1 743 aaKnown RBP16.35■□□□□ 0.21
CCM2-217ENST00000492883 NCAPG2Q86XI2 1143 aa16.35■□□□□ 0.21
CCM2-217ENST00000492883 CPXCR1Q8N123 301 aa16.35■□□□□ 0.21
CCM2-217ENST00000492883 TMTC2Q8N394 836 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms