RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 MTUS1Q9ULD2 1270 aa6.76□□□□□ -1.33
SEC13-219ENST00000492602 RFX7Q2KHR2 1363 aa6.76□□□□□ -1.33
SEC13-219ENST00000492602 SYNRGQ9UMZ2 1314 aa6.76□□□□□ -1.33
SEC13-219ENST00000492602 PLXNA3P51805 1871 aa6.75□□□□□ -1.33
SEC13-219ENST00000492602 MYADML2A6NDP7 307 aa6.75□□□□□ -1.33
SEC13-219ENST00000492602 PDE8BO95263 885 aa6.75□□□□□ -1.33
SEC13-219ENST00000492602 CD4P01730 458 aa6.75□□□□□ -1.33
SEC13-219ENST00000492602 ASGR1P07306 291 aa6.75□□□□□ -1.33
SEC13-219ENST00000492602 IFIT1P09914 478 aaKnown RBP6.75□□□□□ -1.33
SEC13-219ENST00000492602 TAL1P17542 331 aaPredicted RBP6.75□□□□□ -1.33
SEC13-219ENST00000492602 AVPR2P30518 371 aa6.75□□□□□ -1.33
SEC13-219ENST00000492602 BTDP43251 543 aa6.75□□□□□ -1.33
SEC13-219ENST00000492602 JAG1P78504 1218 aa6.75□□□□□ -1.33
SEC13-219ENST00000492602 CCSAPQ6IQ19 270 aaPredicted RBP6.75□□□□□ -1.33
SEC13-219ENST00000492602 USP17L2Q6R6M4 530 aa6.75□□□□□ -1.33
SEC13-219ENST00000492602 CATSPERGQ6ZRH7 1159 aa6.75□□□□□ -1.33
SEC13-219ENST00000492602 G2E3Q7L622 706 aa6.75□□□□□ -1.33
SEC13-219ENST00000492602 C8orf58Q8NAV2 365 aa6.75□□□□□ -1.33
SEC13-219ENST00000492602 LINS1Q8NG48 757 aa6.75□□□□□ -1.33
SEC13-219ENST00000492602 NKD2Q969F2 451 aaPredicted RBP6.75□□□□□ -1.33
SEC13-219ENST00000492602 CDCA7LQ96GN5 454 aa6.75□□□□□ -1.33
SEC13-219ENST00000492602 SLC9A7Q96T83 725 aa6.75□□□□□ -1.33
SEC13-219ENST00000492602 MOV10L1Q9BXT6 1211 aaKnown RBP6.75□□□□□ -1.33
SEC13-219ENST00000492602 CHMP4AQ9BY43 222 aa6.75□□□□□ -1.33
SEC13-219ENST00000492602 WNT8AQ9H1J5 351 aa6.75□□□□□ -1.33
SEC13-219ENST00000492602 SMCHD1A6NHR9 2005 aa6.75□□□□□ -1.33
SEC13-219ENST00000492602 ACACBO00763 2458 aa6.75□□□□□ -1.33
SEC13-219ENST00000492602 TRIOO75962 3097 aa6.75□□□□□ -1.33
SEC13-219ENST00000492602 GDF11O95390 407 aa6.74□□□□□ -1.33
SEC13-219ENST00000492602 C6orf222P0C671 652 aaPredicted RBP6.74□□□□□ -1.33
SEC13-219ENST00000492602 ZNF865P0CJ78 1059 aaPredicted RBP6.74□□□□□ -1.33
SEC13-219ENST00000492602 ERCC3P19447 782 aa6.74□□□□□ -1.33
SEC13-219ENST00000492602 NBL1P41271 181 aa6.74□□□□□ -1.33
SEC13-219ENST00000492602 IRX5P78411 483 aaPredicted RBP6.74□□□□□ -1.33
SEC13-219ENST00000492602 SHROOM1Q2M3G4 852 aaPredicted RBP6.74□□□□□ -1.33
SEC13-219ENST00000492602 LRRC24Q50LG9 513 aa6.74□□□□□ -1.33
SEC13-219ENST00000492602 DEFB128Q7Z7B8 93 aa6.74□□□□□ -1.33
SEC13-219ENST00000492602 HERC6Q8IVU3 1022 aa6.74□□□□□ -1.33
SEC13-219ENST00000492602 CCDC146Q8IYE0 955 aa6.74□□□□□ -1.33
SEC13-219ENST00000492602 PCSK9Q8NBP7 692 aaKnown RBP6.74□□□□□ -1.33
SEC13-219ENST00000492602 PHOSPHO2Q8TCD6 241 aa6.74□□□□□ -1.33
SEC13-219ENST00000492602 DNAAF4Q8WXU2 420 aa6.74□□□□□ -1.33
SEC13-219ENST00000492602 POP1Q99575 1024 aaKnown RBP6.74□□□□□ -1.33
SEC13-219ENST00000492602 TINF2Q9BSI4 451 aa6.74□□□□□ -1.33
SEC13-219ENST00000492602 STK31Q9BXU1 1019 aa6.74□□□□□ -1.33
SEC13-219ENST00000492602 SUGCTQ9HAC7 445 aa6.74□□□□□ -1.33
SEC13-219ENST00000492602 HERC5Q9UII4 1024 aaKnown RBP6.74□□□□□ -1.33
SEC13-219ENST00000492602 GVINP1Q7Z2Y8 2422 aa6.74□□□□□ -1.33
SEC13-219ENST00000492602 ATAD5Q96QE3 1844 aa6.73□□□□□ -1.33
SEC13-219ENST00000492602 CHD6Q8TD26 2715 aa6.73□□□□□ -1.33
SEC13-219ENST00000492602 LCHNA4D1U4 455 aa6.73□□□□□ -1.33
SEC13-219ENST00000492602 SPDYE16A6NNV3 312 aaPredicted RBP6.73□□□□□ -1.33
SEC13-219ENST00000492602 PFKMP08237 780 aa6.73□□□□□ -1.33
SEC13-219ENST00000492602 ACTN1P12814 892 aa6.73□□□□□ -1.33
SEC13-219ENST00000492602 ZXDAP98168 799 aa6.73□□□□□ -1.33
SEC13-219ENST00000492602 PUM1Q14671 1186 aaKnown RBP eCLIP6.73□□□□□ -1.33
SEC13-219ENST00000492602 NBPF20Q3BBV1 942 aa6.73□□□□□ -1.33
SEC13-219ENST00000492602 LBX2Q6XYB7 198 aa6.73□□□□□ -1.33
SEC13-219ENST00000492602 NCAPG2Q86XI2 1143 aa6.73□□□□□ -1.33
SEC13-219ENST00000492602 DZIP1Q86YF9 867 aaKnown RBP6.73□□□□□ -1.33
SEC13-219ENST00000492602 VGLL2Q8N8G2 317 aa6.73□□□□□ -1.33
SEC13-219ENST00000492602 VWCEQ96DN2 955 aa6.73□□□□□ -1.33
SEC13-219ENST00000492602 FEZ1Q99689 392 aa6.73□□□□□ -1.33
SEC13-219ENST00000492602 NOC4LQ9BVI4 516 aaKnown RBP6.73□□□□□ -1.33
SEC13-219ENST00000492602 SPATC1LQ9H0A9 340 aa6.73□□□□□ -1.33
SEC13-219ENST00000492602 CNPY2Q9Y2B0 182 aa6.73□□□□□ -1.33
SEC13-219ENST00000492602 ROBO3Q96MS0 1386 aa6.72□□□□□ -1.33
SEC13-219ENST00000492602 COL4A4P53420 1690 aaPredicted RBP6.72□□□□□ -1.33
SEC13-219ENST00000492602 VCAM1P19320 739 aa6.72□□□□□ -1.33
SEC13-219ENST00000492602 RHBDL3P58872 404 aa6.72□□□□□ -1.33
SEC13-219ENST00000492602 FKBP5Q13451 457 aaPredicted RBP6.72□□□□□ -1.33
SEC13-219ENST00000492602 PLS1Q14651 629 aa6.72□□□□□ -1.33
SEC13-219ENST00000492602 PUM3Q15397 648 aaKnown RBP6.72□□□□□ -1.33
SEC13-219ENST00000492602 GNASQ5JWF2 1037 aa6.72□□□□□ -1.33
SEC13-219ENST00000492602 FRMD5Q7Z6J6 570 aa6.72□□□□□ -1.33
SEC13-219ENST00000492602 SLF2Q8IX21 1173 aa6.72□□□□□ -1.33
SEC13-219ENST00000492602 ABRAQ8N0Z2 381 aa6.72□□□□□ -1.33
SEC13-219ENST00000492602 SHCBP1Q8NEM2 672 aa6.72□□□□□ -1.33
SEC13-219ENST00000492602 PABPC5Q96DU9 382 aaKnown RBP6.72□□□□□ -1.33
SEC13-219ENST00000492602 C12orf42Q96LP6 360 aa6.72□□□□□ -1.33
SEC13-219ENST00000492602 TRIM34Q9BYJ4 488 aa6.72□□□□□ -1.33
SEC13-219ENST00000492602 TRPV6Q9H1D0 765 aa6.72□□□□□ -1.33
SEC13-219ENST00000492602 MROH8Q9H579 483 aa6.72□□□□□ -1.33
SEC13-219ENST00000492602 SPC25Q9HBM1 224 aa6.72□□□□□ -1.33
SEC13-219ENST00000492602 PI4KBQ9UBF8 816 aa6.72□□□□□ -1.33
SEC13-219ENST00000492602 ABCF2Q9UG63 623 aa6.72□□□□□ -1.33
SEC13-219ENST00000492602 FAM184BQ9ULE4 1060 aa6.72□□□□□ -1.33
SEC13-219ENST00000492602 ZBTB21Q9ULJ3 1066 aa6.72□□□□□ -1.33
SEC13-219ENST00000492602 KMT2EQ8IZD2 1858 aa6.72□□□□□ -1.33
SEC13-219ENST00000492602 KIF16BQ96L93 1317 aa6.72□□□□□ -1.33
SEC13-219ENST00000492602 SALL1Q9NSC2 1324 aa6.72□□□□□ -1.33
SEC13-219ENST00000492602 STXBP3O00186 592 aa6.71□□□□□ -1.34
SEC13-219ENST00000492602 GALR2O43603 387 aaPredicted RBP6.71□□□□□ -1.34
SEC13-219ENST00000492602 DUSP11O75319 330 aaKnown RBP6.71□□□□□ -1.34
SEC13-219ENST00000492602 PGK2P07205 417 aa6.71□□□□□ -1.34
SEC13-219ENST00000492602 ZNF853P0CG23 659 aa6.71□□□□□ -1.34
SEC13-219ENST00000492602 ATXN8OSP0DMR3 200 aa6.71□□□□□ -1.34
SEC13-219ENST00000492602 FCER1AP12319 257 aa6.71□□□□□ -1.34
SEC13-219ENST00000492602 FGFR2P21802 821 aa6.71□□□□□ -1.34
SEC13-219ENST00000492602 CST5P28325 142 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms