RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.6■□□□□ 0.25
GPNMB-213ENST00000492512 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.6■□□□□ 0.25
GPNMB-213ENST00000492512 DNAJB2P25686 324 aa16.6■□□□□ 0.25
GPNMB-213ENST00000492512 ICA1Q05084 483 aa16.6■□□□□ 0.25
GPNMB-213ENST00000492512 TMEM132BQ14DG7 1078 aa16.6■□□□□ 0.25
GPNMB-213ENST00000492512 TTF1Q15361 905 aaPredicted RBP16.6■□□□□ 0.25
GPNMB-213ENST00000492512 SLC9C2Q5TAH2 1124 aa16.6■□□□□ 0.25
GPNMB-213ENST00000492512 CLEC10AQ8IUN9 316 aa16.6■□□□□ 0.25
GPNMB-213ENST00000492512 SLC44A5Q8NCS7 719 aa16.6■□□□□ 0.25
GPNMB-213ENST00000492512 TINF2Q9BSI4 451 aa16.6■□□□□ 0.25
GPNMB-213ENST00000492512 VCPKMTQ9H867 229 aa16.6■□□□□ 0.25
GPNMB-213ENST00000492512 SWAP70Q9UH65 585 aa16.6■□□□□ 0.25
GPNMB-213ENST00000492512 TMX2Q9Y320 296 aa16.6■□□□□ 0.25
GPNMB-213ENST00000492512 DCDC2CA8MYV0 355 aa16.59■□□□□ 0.25
GPNMB-213ENST00000492512 WDR46O15213 610 aaKnown RBP16.59■□□□□ 0.25
GPNMB-213ENST00000492512 PGK2P07205 417 aa16.59■□□□□ 0.25
GPNMB-213ENST00000492512 PDE6AP16499 860 aa16.59■□□□□ 0.25
GPNMB-213ENST00000492512 KCTD2Q14681 263 aa16.59■□□□□ 0.25
GPNMB-213ENST00000492512 AACSQ86V21 672 aa16.59■□□□□ 0.25
GPNMB-213ENST00000492512 USP38Q8NB14 1042 aa16.59■□□□□ 0.25
GPNMB-213ENST00000492512 SDR42E1Q8WUS8 393 aa16.59■□□□□ 0.25
GPNMB-213ENST00000492512 DCP1AQ9NPI6 582 aaPredicted RBP16.59■□□□□ 0.25
GPNMB-213ENST00000492512 BAZ2AQ9UIF9 1905 aaKnown RBP16.58■□□□□ 0.25
GPNMB-213ENST00000492512 CYP2D6P10635 497 aa16.58■□□□□ 0.24
GPNMB-213ENST00000492512 AKR1A1P14550 325 aa16.58■□□□□ 0.24
GPNMB-213ENST00000492512 TAL1P17542 331 aaPredicted RBP16.58■□□□□ 0.24
GPNMB-213ENST00000492512 FAAP100Q0VG06 881 aa16.58■□□□□ 0.24
GPNMB-213ENST00000492512 RIOX2Q8IUF8 465 aa16.58■□□□□ 0.24
GPNMB-213ENST00000492512 SIAH1Q8IUQ4 282 aa16.58■□□□□ 0.24
GPNMB-213ENST00000492512 DYNLL2Q96FJ2 89 aa16.58■□□□□ 0.24
GPNMB-213ENST00000492512 ZNF576Q9H609 170 aa16.58■□□□□ 0.24
GPNMB-213ENST00000492512 STARD7Q9NQZ5 370 aa16.58■□□□□ 0.24
GPNMB-213ENST00000492512 CNPY2Q9Y2B0 182 aa16.58■□□□□ 0.24
GPNMB-213ENST00000492512 DIS3Q9Y2L1 958 aaKnown RBP16.58■□□□□ 0.24
GPNMB-213ENST00000492512 ROBO3Q96MS0 1386 aa16.57■□□□□ 0.24
GPNMB-213ENST00000492512 ZNF532Q9HCE3 1301 aa16.57■□□□□ 0.24
GPNMB-213ENST00000492512 TNFRSF10AO00220 468 aa16.57■□□□□ 0.24
GPNMB-213ENST00000492512 AKR1B1P15121 316 aa16.57■□□□□ 0.24
GPNMB-213ENST00000492512 ACLYP53396 1101 aa16.57■□□□□ 0.24
GPNMB-213ENST00000492512 ZNF792Q3KQV3 632 aa16.57■□□□□ 0.24
GPNMB-213ENST00000492512 ANKRD33Q7Z3H0 272 aa16.57■□□□□ 0.24
GPNMB-213ENST00000492512 ERC1Q8IUD2 1116 aa16.57■□□□□ 0.24
GPNMB-213ENST00000492512 FTSJ3Q8IY81 847 aaKnown RBP16.57■□□□□ 0.24
GPNMB-213ENST00000492512 LCORLQ8N3X6 602 aa16.57■□□□□ 0.24
GPNMB-213ENST00000492512 NUP133Q8WUM0 1156 aa16.57■□□□□ 0.24
GPNMB-213ENST00000492512 LENG1Q96BZ8 264 aaPredicted RBP16.57■□□□□ 0.24
GPNMB-213ENST00000492512 TIFAQ96CG3 184 aa16.57■□□□□ 0.24
GPNMB-213ENST00000492512 TOX2Q96NM4 488 aa16.57■□□□□ 0.24
GPNMB-213ENST00000492512 TSEN34Q9BSV6 310 aaKnown RBP16.57■□□□□ 0.24
GPNMB-213ENST00000492512 ADAMTS4O75173 837 aa16.56■□□□□ 0.24
GPNMB-213ENST00000492512 ZNF865P0CJ78 1059 aaPredicted RBP16.56■□□□□ 0.24
GPNMB-213ENST00000492512 COL9A1P20849 921 aa16.56■□□□□ 0.24
GPNMB-213ENST00000492512 STAT3P40763 770 aa16.56■□□□□ 0.24
GPNMB-213ENST00000492512 ITPRIPQ8IWB1 547 aa16.56■□□□□ 0.24
GPNMB-213ENST00000492512 CCDC17Q96LX7 622 aa16.56■□□□□ 0.24
GPNMB-213ENST00000492512 GAS2L1Q99501 681 aaPredicted RBP16.56■□□□□ 0.24
GPNMB-213ENST00000492512 FBXO28Q9NVF7 368 aa16.56■□□□□ 0.24
GPNMB-213ENST00000492512 ADAMTS5Q9UNA0 930 aa16.56■□□□□ 0.24
GPNMB-213ENST00000492512 EXOC6BQ9Y2D4 811 aa16.56■□□□□ 0.24
GPNMB-213ENST00000492512 SYNRGQ9UMZ2 1314 aa16.55■□□□□ 0.24
GPNMB-213ENST00000492512 TIMP1P01033 207 aa16.55■□□□□ 0.24
GPNMB-213ENST00000492512 COPB2P35606 906 aa16.55■□□□□ 0.24
GPNMB-213ENST00000492512 CCDC129Q6ZRS4 1044 aa16.55■□□□□ 0.24
GPNMB-213ENST00000492512 PPM1EQ8WY54 764 aa16.55■□□□□ 0.24
GPNMB-213ENST00000492512 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.55■□□□□ 0.24
GPNMB-213ENST00000492512 ARMT1Q9H993 441 aa16.55■□□□□ 0.24
GPNMB-213ENST00000492512 TCRBV5S4A2TA0A5A2 114 aa16.54■□□□□ 0.24
GPNMB-213ENST00000492512 MOXD2PA6NHM9 499 aa16.54■□□□□ 0.24
GPNMB-213ENST00000492512 GOLIM4O00461 696 aa16.54■□□□□ 0.24
GPNMB-213ENST00000492512 VWA5AO00534 786 aa16.54■□□□□ 0.24
GPNMB-213ENST00000492512 RAD21O60216 631 aa16.54■□□□□ 0.24
GPNMB-213ENST00000492512 KCNA10Q16322 511 aa16.54■□□□□ 0.24
GPNMB-213ENST00000492512 CCDC174Q6PII3 467 aa16.54■□□□□ 0.24
GPNMB-213ENST00000492512 AMOTL1Q8IY63 956 aa16.54■□□□□ 0.24
GPNMB-213ENST00000492512 DNAJC2Q99543 621 aaKnown RBP16.54■□□□□ 0.24
GPNMB-213ENST00000492512 GOPCQ9HD26 462 aa16.54■□□□□ 0.24
GPNMB-213ENST00000492512 IL1RAPL2Q9NP60 686 aa16.54■□□□□ 0.24
GPNMB-213ENST00000492512 FAM184BQ9ULE4 1060 aa16.54■□□□□ 0.24
GPNMB-213ENST00000492512 PPP1R9AQ9ULJ8 1098 aa16.54■□□□□ 0.24
GPNMB-213ENST00000492512 MROH7Q68CQ1 1323 aa16.53■□□□□ 0.24
GPNMB-213ENST00000492512 EEF2P13639 858 aaKnown RBP16.53■□□□□ 0.24
GPNMB-213ENST00000492512 CDK8P49336 464 aa16.53■□□□□ 0.24
GPNMB-213ENST00000492512 PPIGQ13427 754 aaKnown RBP eCLIP16.53■□□□□ 0.24
GPNMB-213ENST00000492512 MFSD5Q6N075 450 aa16.53■□□□□ 0.24
GPNMB-213ENST00000492512 CEP85Q6P2H3 762 aa16.53■□□□□ 0.24
GPNMB-213ENST00000492512 MSL3Q8N5Y2 521 aaKnown RBP16.53■□□□□ 0.24
GPNMB-213ENST00000492512 KLHDC9Q8NEP7 349 aa16.53■□□□□ 0.24
GPNMB-213ENST00000492512 GLT1D1Q96MS3 346 aa16.53■□□□□ 0.24
GPNMB-213ENST00000492512 KANSL2Q9H9L4 492 aa16.53■□□□□ 0.24
GPNMB-213ENST00000492512 ATP8A2Q9NTI2 1148 aa16.53■□□□□ 0.24
GPNMB-213ENST00000492512 TBX21Q9UL17 535 aa16.53■□□□□ 0.24
GPNMB-213ENST00000492512 ZNF214Q9UL59 606 aaPredicted RBP16.53■□□□□ 0.24
GPNMB-213ENST00000492512 BDP1A6H8Y1 2624 aa16.53■□□□□ 0.24
GPNMB-213ENST00000492512 CHD9Q3L8U1 2897 aa16.53■□□□□ 0.24
GPNMB-213ENST00000492512 SYNGAP1Q96PV0 1343 aa16.52■□□□□ 0.24
GPNMB-213ENST00000492512 MCM3APO60318 1980 aa16.52■□□□□ 0.24
GPNMB-213ENST00000492512 PRKAB2O43741 272 aa16.52■□□□□ 0.24
GPNMB-213ENST00000492512 HSP90AB4PQ58FF6 505 aa16.52■□□□□ 0.24
GPNMB-213ENST00000492512 FAM83BQ5T0W9 1011 aa16.52■□□□□ 0.24
GPNMB-213ENST00000492512 C12orf60Q5U649 245 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms