RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 SBK1Q52WX2 424 aa18.26■□□□□ 0.51
SEMA4D-220ENST00000492386 LINC00116Q8NCU8 138 aa18.26■□□□□ 0.51
SEMA4D-220ENST00000492386 CCDC12Q8WUD4 166 aaPredicted RBP18.26■□□□□ 0.51
SEMA4D-220ENST00000492386 SMARCC1Q92922 1105 aaPredicted RBP18.26■□□□□ 0.51
SEMA4D-220ENST00000492386 LZTFL1Q9NQ48 299 aa18.26■□□□□ 0.51
SEMA4D-220ENST00000492386 LIMA1Q9UHB6 759 aaKnown RBP18.26■□□□□ 0.51
SEMA4D-220ENST00000492386 LRRC10BA6NIK2 292 aa18.26■□□□□ 0.51
SEMA4D-220ENST00000492386 SEC31AO94979 1220 aaKnown RBP18.26■□□□□ 0.51
SEMA4D-220ENST00000492386 PRDX5P30044 214 aa18.26■□□□□ 0.51
SEMA4D-220ENST00000492386 FXR1P51114 621 aaKnown RBP eCLIP18.26■□□□□ 0.51
SEMA4D-220ENST00000492386 RRAGBQ5VZM2 374 aa18.26■□□□□ 0.51
SEMA4D-220ENST00000492386 RASGRP2Q7LDG7 609 aa18.26■□□□□ 0.51
SEMA4D-220ENST00000492386 PYM1Q9BRP8 204 aaKnown RBP18.26■□□□□ 0.51
SEMA4D-220ENST00000492386 ARPP21Q9UBL0 812 aaPredicted RBP18.26■□□□□ 0.51
SEMA4D-220ENST00000492386 RWDD2AQ9UIY3 292 aa18.26■□□□□ 0.51
SEMA4D-220ENST00000492386 BICDL1Q6ZP65 573 aa18.25■□□□□ 0.51
SEMA4D-220ENST00000492386 CNGA4Q8IV77 575 aa18.25■□□□□ 0.51
SEMA4D-220ENST00000492386 C4orf32Q8N8J7 132 aa18.25■□□□□ 0.51
SEMA4D-220ENST00000492386 CCDC51Q96ER9 411 aa18.25■□□□□ 0.51
SEMA4D-220ENST00000492386 TFCP2L1Q9NZI6 479 aa18.25■□□□□ 0.51
SEMA4D-220ENST00000492386 HIBADHP31937 336 aaKnown RBP18.25■□□□□ 0.51
SEMA4D-220ENST00000492386 CCT6AP40227 531 aaKnown RBP18.25■□□□□ 0.51
SEMA4D-220ENST00000492386 TEX35Q5T0J7 233 aa18.25■□□□□ 0.51
SEMA4D-220ENST00000492386 RABGGTAQ92696 567 aa18.25■□□□□ 0.51
SEMA4D-220ENST00000492386 RPS8P62241 208 aaKnown RBP18.24■□□□□ 0.51
SEMA4D-220ENST00000492386 TBC1D9BQ66K14 1250 aa18.24■□□□□ 0.51
SEMA4D-220ENST00000492386 ARL6IP4Q66PJ3 421 aaKnown RBP18.24■□□□□ 0.51
SEMA4D-220ENST00000492386 CC2D1AQ6P1N0 951 aaPredicted RBP18.24■□□□□ 0.51
SEMA4D-220ENST00000492386 FAM205AQ6ZU69 1335 aa18.24■□□□□ 0.51
SEMA4D-220ENST00000492386 TSPY2A6NKD2 308 aa18.24■□□□□ 0.51
SEMA4D-220ENST00000492386 ATP8B1O43520 1251 aa18.24■□□□□ 0.51
SEMA4D-220ENST00000492386 ZNF658Q5TYW1 1059 aaPredicted RBP18.24■□□□□ 0.51
SEMA4D-220ENST00000492386 GTF2E1P29083 439 aaPredicted RBP18.23■□□□□ 0.51
SEMA4D-220ENST00000492386 KIF5BP33176 963 aa18.23■□□□□ 0.51
SEMA4D-220ENST00000492386 PAK1Q13153 545 aa18.23■□□□□ 0.51
SEMA4D-220ENST00000492386 SPATA31A5Q5VU36 1347 aa18.23■□□□□ 0.51
SEMA4D-220ENST00000492386 SPATA31A7Q8IWB4 1347 aa18.23■□□□□ 0.51
SEMA4D-220ENST00000492386 RNF225M0QZC1 329 aaPredicted RBP18.23■□□□□ 0.51
SEMA4D-220ENST00000492386 N4BP3O15049 544 aa18.23■□□□□ 0.51
SEMA4D-220ENST00000492386 TBC1D8O95759 1140 aa18.23■□□□□ 0.51
SEMA4D-220ENST00000492386 RPN1P04843 607 aaKnown RBP18.23■□□□□ 0.51
SEMA4D-220ENST00000492386 CALML3P27482 149 aa18.23■□□□□ 0.51
SEMA4D-220ENST00000492386 LONP1P36776 959 aaKnown RBP18.23■□□□□ 0.51
SEMA4D-220ENST00000492386 COPB1P53618 953 aaKnown RBP18.23■□□□□ 0.51
SEMA4D-220ENST00000492386 FAM193AP78312 1265 aa18.23■□□□□ 0.51
SEMA4D-220ENST00000492386 BLIDQ8IZY5 108 aa18.23■□□□□ 0.51
SEMA4D-220ENST00000492386 NELFBQ8WX92 580 aa18.23■□□□□ 0.51
SEMA4D-220ENST00000492386 GOLGA1Q92805 767 aa18.23■□□□□ 0.51
SEMA4D-220ENST00000492386 PARD6BQ9BYG5 372 aa18.23■□□□□ 0.51
SEMA4D-220ENST00000492386 KIF5CO60282 957 aa18.22■□□□□ 0.51
SEMA4D-220ENST00000492386 SASH3O75995 380 aa18.22■□□□□ 0.51
SEMA4D-220ENST00000492386 TCP11X2Q5H9J9 407 aa18.22■□□□□ 0.51
SEMA4D-220ENST00000492386 SMIM5Q71RC9 77 aa18.22■□□□□ 0.51
SEMA4D-220ENST00000492386 GPKOWQ92917 476 aaPredicted RBP eCLIP18.22■□□□□ 0.51
SEMA4D-220ENST00000492386 UBXN6Q9BZV1 441 aa18.22■□□□□ 0.51
SEMA4D-220ENST00000492386 VPS16Q9H269 839 aa18.22■□□□□ 0.51
SEMA4D-220ENST00000492386 SH3GLB2Q9NR46 395 aa18.22■□□□□ 0.51
SEMA4D-220ENST00000492386 IL17RBQ9NRM6 502 aa18.22■□□□□ 0.51
SEMA4D-220ENST00000492386 RMND1Q9NWS8 449 aa18.22■□□□□ 0.51
SEMA4D-220ENST00000492386 COL24A1Q17RW2 1714 aa18.22■□□□□ 0.51
SEMA4D-220ENST00000492386 KCNJ18B7U540 433 aa18.22■□□□□ 0.51
SEMA4D-220ENST00000492386 USP17L8P0C7I0 530 aa18.22■□□□□ 0.51
SEMA4D-220ENST00000492386 CDC25AP30304 524 aa18.22■□□□□ 0.51
SEMA4D-220ENST00000492386 KCNQ4P56696 695 aa18.22■□□□□ 0.51
SEMA4D-220ENST00000492386 ERVK-24P63145 666 aa18.22■□□□□ 0.51
SEMA4D-220ENST00000492386 SPAG1Q07617 926 aa18.22■□□□□ 0.51
SEMA4D-220ENST00000492386 KCNJ12Q14500 433 aa18.22■□□□□ 0.51
SEMA4D-220ENST00000492386 ANKRD2Q9GZV1 360 aa18.22■□□□□ 0.51
SEMA4D-220ENST00000492386 ABHD10Q9NUJ1 306 aa18.22■□□□□ 0.51
SEMA4D-220ENST00000492386 MCM9Q9NXL9 1143 aa18.22■□□□□ 0.51
SEMA4D-220ENST00000492386 TAB2Q9NYJ8 693 aa18.22■□□□□ 0.51
SEMA4D-220ENST00000492386 PCDHA4Q9UN74 947 aa18.22■□□□□ 0.51
SEMA4D-220ENST00000492386 KDM4FA0A1W2PPD8 638 aa18.21■□□□□ 0.51
SEMA4D-220ENST00000492386 M0R2N6 131 aa18.21■□□□□ 0.51
SEMA4D-220ENST00000492386 TXNRD3Q86VQ6 643 aa18.21■□□□□ 0.51
SEMA4D-220ENST00000492386 TMTC1Q8IUR5 882 aa18.21■□□□□ 0.51
SEMA4D-220ENST00000492386 KAT14Q9H8E8 782 aa18.21■□□□□ 0.51
SEMA4D-220ENST00000492386 MKRN1Q9UHC7 482 aaKnown RBP18.21■□□□□ 0.51
SEMA4D-220ENST00000492386 GDAQ9Y2T3 454 aa18.21■□□□□ 0.51
SEMA4D-220ENST00000492386 IRS2Q9Y4H2 1338 aa18.2■□□□□ 0.5
SEMA4D-220ENST00000492386 RGL2O15211 777 aa18.2■□□□□ 0.5
SEMA4D-220ENST00000492386 PRCPP42785 496 aa18.2■□□□□ 0.5
SEMA4D-220ENST00000492386 TYW1BQ6NUM6 668 aa18.2■□□□□ 0.5
SEMA4D-220ENST00000492386 SRGAP1Q7Z6B7 1085 aa18.2■□□□□ 0.5
SEMA4D-220ENST00000492386 STAG2Q8N3U4 1231 aa18.2■□□□□ 0.5
SEMA4D-220ENST00000492386 ACRBPQ8NEB7 543 aa18.2■□□□□ 0.5
SEMA4D-220ENST00000492386 CDC23Q9UJX2 597 aa18.2■□□□□ 0.5
SEMA4D-220ENST00000492386 JAG2Q9Y219 1238 aa18.2■□□□□ 0.5
SEMA4D-220ENST00000492386 TXLNAP40222 546 aa18.2■□□□□ 0.5
SEMA4D-220ENST00000492386 TFAP4Q01664 338 aa18.2■□□□□ 0.5
SEMA4D-220ENST00000492386 SLC4A8Q2Y0W8 1093 aa18.2■□□□□ 0.5
SEMA4D-220ENST00000492386 ZNF569Q5MCW4 686 aa18.2■□□□□ 0.5
SEMA4D-220ENST00000492386 TMED8Q6PL24 325 aaPredicted RBP18.2■□□□□ 0.5
SEMA4D-220ENST00000492386 BARGINQ6ZT62 677 aa18.2■□□□□ 0.5
SEMA4D-220ENST00000492386 DGKHQ86XP1 1220 aa18.2■□□□□ 0.5
SEMA4D-220ENST00000492386 CREBRFQ8IUR6 639 aa18.2■□□□□ 0.5
SEMA4D-220ENST00000492386 RASGRP4Q8TDF6 673 aa18.2■□□□□ 0.5
SEMA4D-220ENST00000492386 ANKS1AQ92625 1134 aa18.2■□□□□ 0.5
SEMA4D-220ENST00000492386 TTF2Q9UNY4 1162 aaKnown RBP18.2■□□□□ 0.5
SEMA4D-220ENST00000492386 STAT6P42226 847 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms