RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 COPB1P53618 953 aaKnown RBP7.19□□□□□ -1.26
CCDC6-202ENST00000491922 STX17P56962 302 aa7.19□□□□□ -1.26
CCDC6-202ENST00000491922 INHBEP58166 350 aa7.19□□□□□ -1.26
CCDC6-202ENST00000491922 XRCC4Q13426 336 aa7.19□□□□□ -1.26
CCDC6-202ENST00000491922 CFAP58Q5T655 872 aa7.19□□□□□ -1.26
CCDC6-202ENST00000491922 RALYLQ86SE5 291 aaKnown RBP7.19□□□□□ -1.26
CCDC6-202ENST00000491922 GRAMD1CQ8IYS0 662 aa7.19□□□□□ -1.26
CCDC6-202ENST00000491922 ARFGAP2Q8N6H7 521 aa7.19□□□□□ -1.26
CCDC6-202ENST00000491922 CHP1Q99653 195 aa7.19□□□□□ -1.26
CCDC6-202ENST00000491922 HOMER3Q9NSC5 361 aa7.19□□□□□ -1.26
CCDC6-202ENST00000491922 ETAA1Q9NY74 926 aa7.19□□□□□ -1.26
CCDC6-202ENST00000491922 STIM2Q9P246 746 aa7.19□□□□□ -1.26
CCDC6-202ENST00000491922 TTC36A6NLP5 189 aa7.19□□□□□ -1.26
CCDC6-202ENST00000491922 BTBD11A6QL63 1104 aa7.19□□□□□ -1.26
CCDC6-202ENST00000491922 ECM2O94769 699 aaPredicted RBP7.19□□□□□ -1.26
CCDC6-202ENST00000491922 IPO7O95373 1038 aaKnown RBP7.19□□□□□ -1.26
CCDC6-202ENST00000491922 CD44P16070 742 aaKnown RBP7.19□□□□□ -1.26
CCDC6-202ENST00000491922 PRLRP16471 622 aa7.19□□□□□ -1.26
CCDC6-202ENST00000491922 CYLC1P35663 651 aaPredicted RBP7.19□□□□□ -1.26
CCDC6-202ENST00000491922 METAP2P50579 478 aaKnown RBP eCLIP7.19□□□□□ -1.26
CCDC6-202ENST00000491922 SLMAPQ14BN4 828 aa7.19□□□□□ -1.26
CCDC6-202ENST00000491922 GLE1Q53GS7 698 aaKnown RBP7.19□□□□□ -1.26
CCDC6-202ENST00000491922 LACTB2Q53H82 288 aaPredicted RBP7.19□□□□□ -1.26
CCDC6-202ENST00000491922 ANKRD20A8PQ5CZ79 823 aa7.19□□□□□ -1.26
CCDC6-202ENST00000491922 NBPF10Q6P3W6 841 aaKnown RBP7.19□□□□□ -1.26
CCDC6-202ENST00000491922 NOSTRINQ8IVI9 506 aa7.19□□□□□ -1.26
CCDC6-202ENST00000491922 SH2D3CQ8N5H7 860 aa7.19□□□□□ -1.26
CCDC6-202ENST00000491922 TATDN2Q93075 761 aa7.19□□□□□ -1.26
CCDC6-202ENST00000491922 CYFIP2Q96F07 1278 aa7.19□□□□□ -1.26
CCDC6-202ENST00000491922 AIFM3Q96NN9 605 aa7.19□□□□□ -1.26
CCDC6-202ENST00000491922 GSDMAQ96QA5 445 aa7.19□□□□□ -1.26
CCDC6-202ENST00000491922 DNAJC7Q99615 494 aa7.19□□□□□ -1.26
CCDC6-202ENST00000491922 LRRC1Q9BTT6 524 aa7.19□□□□□ -1.26
CCDC6-202ENST00000491922 TSGA10Q9BZW7 698 aa7.19□□□□□ -1.26
CCDC6-202ENST00000491922 JADE2Q9NQC1 790 aa7.19□□□□□ -1.26
CCDC6-202ENST00000491922 DMGDHQ9UI17 866 aaKnown RBP7.19□□□□□ -1.26
CCDC6-202ENST00000491922 CEP131Q9UPN4 1083 aa7.19□□□□□ -1.26
CCDC6-202ENST00000491922 SETD1BQ9UPS6 1966 aaKnown RBP7.19□□□□□ -1.26
CCDC6-202ENST00000491922 PPP1R3GB7ZBB8 358 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 E7EVH7 732 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 RNF225M0QZC1 329 aaPredicted RBP7.18□□□□□ -1.26
CCDC6-202ENST00000491922 ZNF185O15231 689 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 MGRN1O60291 552 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 DNAJC8O75937 253 aaPredicted RBP7.18□□□□□ -1.26
CCDC6-202ENST00000491922 IBSPP21815 317 aaPredicted RBP7.18□□□□□ -1.26
CCDC6-202ENST00000491922 RFX5P48382 616 aaPredicted RBP7.18□□□□□ -1.26
CCDC6-202ENST00000491922 VAV2P52735 878 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 RWDD2BP57060 319 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 ANTXR2P58335 489 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 NEXNQ0ZGT2 675 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 E2F5Q15329 346 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 TTF1Q15361 905 aaPredicted RBP7.18□□□□□ -1.26
CCDC6-202ENST00000491922 RILPL1Q5EBL4 403 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 FBXO31Q5XUX0 539 aaPredicted RBP7.18□□□□□ -1.26
CCDC6-202ENST00000491922 KCTD16Q68DU8 428 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 ARMC9Q7Z3E5 817 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 RAB11FIP4Q86YS3 637 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 CREG2Q8IUH2 290 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 IQCKQ8N0W5 287 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 MREGQ8N565 214 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 RASSF8Q8NHQ8 419 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 ATP6V1G3Q96LB4 118 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 PURBQ96QR8 312 aaKnown RBP7.18□□□□□ -1.26
CCDC6-202ENST00000491922 PRDM16Q9HAZ2 1276 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 SEC31BQ9NQW1 1179 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 HAUS2Q9NVX0 235 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 SNX12Q9UMY4 172 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 SRPRBQ9Y5M8 271 aaKnown RBP7.18□□□□□ -1.26
CCDC6-202ENST00000491922 PIK3C2AO00443 1686 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 STK36Q9NRP7 1315 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 FRMD3A2A2Y4 597 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 PES1O00541 588 aaKnown RBP7.18□□□□□ -1.26
CCDC6-202ENST00000491922 KCNQ3O43525 872 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 GHRP10912 638 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 CDC25AP30304 524 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 HOXC9P31274 260 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 PTPN12Q05209 780 aaKnown RBP7.18□□□□□ -1.26
CCDC6-202ENST00000491922 RBBP5Q15291 538 aaKnown RBP7.18□□□□□ -1.26
CCDC6-202ENST00000491922 SAFBQ15424 915 aaKnown RBP eCLIP7.18□□□□□ -1.26
CCDC6-202ENST00000491922 PROSER3Q2NL68 480 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 CDCA2Q69YH5 1023 aaPredicted RBP7.18□□□□□ -1.26
CCDC6-202ENST00000491922 TTLL7Q6ZT98 887 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 IFT20Q8IY31 132 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 SPATA4Q8NEY3 305 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 CCDC47Q96A33 483 aaKnown RBP7.18□□□□□ -1.26
CCDC6-202ENST00000491922 VPS16Q9H269 839 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 ESF1Q9H501 851 aaKnown RBP7.18□□□□□ -1.26
CCDC6-202ENST00000491922 CTNND2Q9UQB3 1225 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 LUC7L2Q9Y383 392 aaKnown RBP7.18□□□□□ -1.26
CCDC6-202ENST00000491922 RICTORQ6R327 1708 aa7.18□□□□□ -1.26
CCDC6-202ENST00000491922 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.18□□□□□ -1.26
CCDC6-202ENST00000491922 ZNF233A6NK53 670 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 M0R2C6 588 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 KRT14P02533 472 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 SSBP05455 408 aaKnown RBP eCLIP7.17□□□□□ -1.26
CCDC6-202ENST00000491922 IGKV5-2P06315 115 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 IARSP41252 1262 aaKnown RBP7.17□□□□□ -1.26
CCDC6-202ENST00000491922 SCTRP47872 440 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 SEC24CP53992 1094 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 EZH2Q15910 746 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms