RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 GINM1Q9NU53 330 aa6.17□□□□□ -1.42
VTA1-204ENST00000491881 TACC3Q9Y6A5 838 aa6.17□□□□□ -1.42
VTA1-204ENST00000491881 SRFP11831 508 aa6.16□□□□□ -1.42
VTA1-204ENST00000491881 GRK4P32298 578 aa6.16□□□□□ -1.42
VTA1-204ENST00000491881 NASPP49321 788 aaPredicted RBP6.16□□□□□ -1.42
VTA1-204ENST00000491881 MLECQ14165 292 aa6.16□□□□□ -1.42
VTA1-204ENST00000491881 SF3A1Q15459 793 aaKnown RBP6.16□□□□□ -1.42
VTA1-204ENST00000491881 FBXW10Q5XX13 1052 aa6.16□□□□□ -1.42
VTA1-204ENST00000491881 REXO1Q8N1G1 1221 aaKnown RBP6.16□□□□□ -1.42
VTA1-204ENST00000491881 PIWIL2Q8TC59 973 aaKnown RBP6.16□□□□□ -1.42
VTA1-204ENST00000491881 CPLX3Q8WVH0 158 aa6.16□□□□□ -1.42
VTA1-204ENST00000491881 SEC16BQ96JE7 1060 aa6.16□□□□□ -1.42
VTA1-204ENST00000491881 FERD3LQ96RJ6 166 aa6.16□□□□□ -1.42
VTA1-204ENST00000491881 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.16□□□□□ -1.424e-6■□□□□ 9.9
VTA1-204ENST00000491881 POLR3KQ9Y2Y1 108 aaPredicted RBP6.16□□□□□ -1.42
VTA1-204ENST00000491881 PCDHB14Q9Y5E9 798 aa6.16□□□□□ -1.42
VTA1-204ENST00000491881 RBAK-RBAKDNI3L0D1 243 aa6.15□□□□□ -1.42
VTA1-204ENST00000491881 HTR3BO95264 441 aa6.15□□□□□ -1.42
VTA1-204ENST00000491881 SSBP05455 408 aaKnown RBP eCLIP6.15□□□□□ -1.42
VTA1-204ENST00000491881 PGRP06401 933 aa6.15□□□□□ -1.42
VTA1-204ENST00000491881 ATF4P18848 351 aaPredicted RBP6.15□□□□□ -1.42
VTA1-204ENST00000491881 PLCG1P19174 1290 aa6.15□□□□□ -1.42
VTA1-204ENST00000491881 TRHRP34981 398 aaPredicted RBP6.15□□□□□ -1.42
VTA1-204ENST00000491881 SOX9P48436 509 aa6.15□□□□□ -1.42
VTA1-204ENST00000491881 RELTQ969Z4 430 aa6.15□□□□□ -1.42
VTA1-204ENST00000491881 TANGO6Q9C0B7 1094 aa6.15□□□□□ -1.42
VTA1-204ENST00000491881 RNF32Q9H0A6 362 aa6.15□□□□□ -1.42
VTA1-204ENST00000491881 ZCCHC4Q9H5U6 513 aa6.15□□□□□ -1.42
VTA1-204ENST00000491881 PARD6AQ9NPB6 346 aa6.15□□□□□ -1.42
VTA1-204ENST00000491881 PPT2Q9UMR5 302 aa6.15□□□□□ -1.42
VTA1-204ENST00000491881 CORINQ9Y5Q5 1042 aa6.15□□□□□ -1.42
VTA1-204ENST00000491881 IMPDH2P12268 514 aa6.14□□□□□ -1.43
VTA1-204ENST00000491881 BMP7P18075 431 aa6.14□□□□□ -1.43
VTA1-204ENST00000491881 TPP2P29144 1249 aaPredicted RBP6.14□□□□□ -1.43
VTA1-204ENST00000491881 ETV3P41162 512 aa6.14□□□□□ -1.43
VTA1-204ENST00000491881 SREK1Q8WXA9 508 aaKnown RBP6.14□□□□□ -1.43
VTA1-204ENST00000491881 CRBNQ96SW2 442 aa6.14□□□□□ -1.43
VTA1-204ENST00000491881 SLC6A17Q9H1V8 727 aa6.14□□□□□ -1.43
VTA1-204ENST00000491881 TRIT1Q9H3H1 467 aaKnown RBP6.14□□□□□ -1.43
VTA1-204ENST00000491881 STRIP2Q9ULQ0 834 aa6.14□□□□□ -1.43
VTA1-204ENST00000491881 WASH4PA8MWX3 477 aa6.13□□□□□ -1.43
VTA1-204ENST00000491881 DLG4P78352 724 aa6.13□□□□□ -1.43
VTA1-204ENST00000491881 CLCQ05315 142 aa6.13□□□□□ -1.43
VTA1-204ENST00000491881 CCDC81Q6ZN84 652 aa6.13□□□□□ -1.43
VTA1-204ENST00000491881 ZNF605Q86T29 641 aa6.13□□□□□ -1.43
VTA1-204ENST00000491881 IRF2BP1Q8IU81 584 aa6.13□□□□□ -1.43
VTA1-204ENST00000491881 LILRA2Q8N149 483 aa6.13□□□□□ -1.43
VTA1-204ENST00000491881 OXR1Q8N573 874 aa6.13□□□□□ -1.43
VTA1-204ENST00000491881 PDZD8Q8NEN9 1154 aa6.13□□□□□ -1.43
VTA1-204ENST00000491881 DPH2Q9BQC3 489 aaPredicted RBP6.13□□□□□ -1.43
VTA1-204ENST00000491881 MCOLN1Q9GZU1 580 aa6.13□□□□□ -1.43
VTA1-204ENST00000491881 C19orf44Q9H6X5 657 aa6.13□□□□□ -1.43
VTA1-204ENST00000491881 EHMT1Q9H9B1 1298 aa6.13□□□□□ -1.43
VTA1-204ENST00000491881 REV1Q9UBZ9 1251 aa6.13□□□□□ -1.43
VTA1-204ENST00000491881 KLHL3Q9UH77 587 aa6.13□□□□□ -1.43
VTA1-204ENST00000491881 ADAM30Q9UKF2 790 aa6.13□□□□□ -1.43
VTA1-204ENST00000491881 ZNRF3Q9ULT6 936 aa6.13□□□□□ -1.43
VTA1-204ENST00000491881 PRR36Q9H6K5 1346 aa6.13□□□□□ -1.43
VTA1-204ENST00000491881 ATE1O95260 518 aa6.12□□□□□ -1.43
VTA1-204ENST00000491881 ATP2B1P20020 1258 aa6.12□□□□□ -1.43
VTA1-204ENST00000491881 TMEM132EQ6IEE7 984 aa6.12□□□□□ -1.43
VTA1-204ENST00000491881 BAHD1Q8TBE0 780 aaPredicted RBP6.12□□□□□ -1.43
VTA1-204ENST00000491881 SYTL4Q96C24 671 aaPredicted RBP6.12□□□□□ -1.43
VTA1-204ENST00000491881 GMLQ99445 158 aa6.12□□□□□ -1.43
VTA1-204ENST00000491881 SRRTQ9BXP5 876 aaKnown RBP6.12□□□□□ -1.43
VTA1-204ENST00000491881 PPP1R1BQ9UD71 204 aaPredicted RBP6.12□□□□□ -1.43
VTA1-204ENST00000491881 DUSP13Q9UII6 198 aa6.12□□□□□ -1.43
VTA1-204ENST00000491881 SEMA7AO75326 666 aa6.11□□□□□ -1.43
VTA1-204ENST00000491881 FGRP09769 529 aa6.11□□□□□ -1.43
VTA1-204ENST00000491881 ZGLP1P0C6A0 271 aa6.11□□□□□ -1.43
VTA1-204ENST00000491881 YARSP54577 528 aaKnown RBP6.11□□□□□ -1.43
VTA1-204ENST00000491881 EIF6P56537 245 aaKnown RBP6.11□□□□□ -1.43
VTA1-204ENST00000491881 EGR3Q06889 387 aa6.11□□□□□ -1.43
VTA1-204ENST00000491881 LRRFIP1Q32MZ4 808 aaKnown RBP6.11□□□□□ -1.43
VTA1-204ENST00000491881 TMEM201Q5SNT2 666 aa6.11□□□□□ -1.43
VTA1-204ENST00000491881 MCF2L2Q86YR7 1114 aa6.11□□□□□ -1.43
VTA1-204ENST00000491881 FAM13CQ8NE31 585 aa6.11□□□□□ -1.43
VTA1-204ENST00000491881 ANAPC16Q96DE5 110 aa6.11□□□□□ -1.43
VTA1-204ENST00000491881 TMEM87BQ96K49 555 aa6.11□□□□□ -1.43
VTA1-204ENST00000491881 Q96M66 194 aa6.11□□□□□ -1.43
VTA1-204ENST00000491881 DUSP15Q9H1R2 295 aaPredicted RBP6.11□□□□□ -1.43
VTA1-204ENST00000491881 GPATCH2Q9NW75 528 aa6.11□□□□□ -1.43
VTA1-204ENST00000491881 GMIPQ9P107 970 aa6.11□□□□□ -1.43
VTA1-204ENST00000491881 USP35Q9P2H5 1018 aa6.11□□□□□ -1.43
VTA1-204ENST00000491881 TJP2Q9UDY2 1190 aa6.11□□□□□ -1.43
VTA1-204ENST00000491881 CNOT6Q9ULM6 557 aaKnown RBP6.11□□□□□ -1.43
VTA1-204ENST00000491881 MYOCOSA0A1B0GUC4 107 aa6.1□□□□□ -1.43
VTA1-204ENST00000491881 FITM1A5D6W6 292 aa6.1□□□□□ -1.43
VTA1-204ENST00000491881 PEX10O60683 326 aa6.1□□□□□ -1.43
VTA1-204ENST00000491881 GAB4Q2WGN9 574 aa6.1□□□□□ -1.43
VTA1-204ENST00000491881 TCERG1LQ5VWI1 586 aa6.1□□□□□ -1.43
VTA1-204ENST00000491881 MRPL41Q8IXM3 137 aaKnown RBP6.1□□□□□ -1.43
VTA1-204ENST00000491881 DHX38Q92620 1227 aaKnown RBP6.1□□□□□ -1.43
VTA1-204ENST00000491881 ACSF2Q96CM8 615 aaPredicted RBP6.1□□□□□ -1.43
VTA1-204ENST00000491881 DRC1Q96MC2 740 aa6.1□□□□□ -1.43
VTA1-204ENST00000491881 SP110Q9HB58 689 aa6.1□□□□□ -1.43
VTA1-204ENST00000491881 CWC22Q9HCG8 908 aaKnown RBP6.1□□□□□ -1.43
VTA1-204ENST00000491881 JAG2Q9Y219 1238 aa6.1□□□□□ -1.43
VTA1-204ENST00000491881 FOXD2O60548 495 aaPredicted RBP6.09□□□□□ -1.43
VTA1-204ENST00000491881 LTKP29376 864 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms