RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 HNRNPUQ00839 825 aaKnown RBP eCLIP17.48■□□□□ 0.39
SSR4-212ENST00000491833 CLEC10AQ8IUN9 316 aa17.48■□□□□ 0.39
SSR4-212ENST00000491833 LCORLQ8N3X6 602 aa17.48■□□□□ 0.39
SSR4-212ENST00000491833 MMP19Q99542 508 aa17.48■□□□□ 0.39
SSR4-212ENST00000491833 EXOC6BQ9Y2D4 811 aa17.48■□□□□ 0.39
SSR4-212ENST00000491833 A0A1W2PQ45 241 aaPredicted RBP17.47■□□□□ 0.39
SSR4-212ENST00000491833 A0A1W2PQY0 241 aa17.47■□□□□ 0.39
SSR4-212ENST00000491833 PQBP1O60828 265 aaKnown RBP17.47■□□□□ 0.39
SSR4-212ENST00000491833 CYP2D6P10635 497 aa17.47■□□□□ 0.39
SSR4-212ENST00000491833 AKR1A1P14550 325 aa17.47■□□□□ 0.39
SSR4-212ENST00000491833 ITGB8P26012 769 aa17.47■□□□□ 0.39
SSR4-212ENST00000491833 FPGSQ05932 587 aa17.47■□□□□ 0.39
SSR4-212ENST00000491833 KCTD2Q14681 263 aa17.47■□□□□ 0.39
SSR4-212ENST00000491833 TMEM132BQ14DG7 1078 aa17.47■□□□□ 0.39
SSR4-212ENST00000491833 CEP85Q6P2H3 762 aa17.47■□□□□ 0.39
SSR4-212ENST00000491833 PRDM6Q9NQX0 595 aa17.47■□□□□ 0.39
SSR4-212ENST00000491833 KIAA0355O15063 1070 aa17.46■□□□□ 0.39
SSR4-212ENST00000491833 PGK1P00558 417 aa17.46■□□□□ 0.39
SSR4-212ENST00000491833 AKR1B1P15121 316 aa17.46■□□□□ 0.39
SSR4-212ENST00000491833 RIOX2Q8IUF8 465 aa17.46■□□□□ 0.39
SSR4-212ENST00000491833 DYNLL2Q96FJ2 89 aa17.46■□□□□ 0.39
SSR4-212ENST00000491833 DNAJC2Q99543 621 aaKnown RBP17.46■□□□□ 0.39
SSR4-212ENST00000491833 TINF2Q9BSI4 451 aa17.46■□□□□ 0.39
SSR4-212ENST00000491833 DIS3Q9Y2L1 958 aaKnown RBP17.46■□□□□ 0.39
SSR4-212ENST00000491833 ZNFX1Q9P2E3 1918 aaKnown RBP17.46■□□□□ 0.39
SSR4-212ENST00000491833 GOLIM4O00461 696 aa17.45■□□□□ 0.38
SSR4-212ENST00000491833 PGK2P07205 417 aa17.45■□□□□ 0.38
SSR4-212ENST00000491833 COPB2P35606 906 aa17.45■□□□□ 0.38
SSR4-212ENST00000491833 EPHB4P54760 987 aa17.45■□□□□ 0.38
SSR4-212ENST00000491833 HSP90AB4PQ58FF6 505 aa17.45■□□□□ 0.38
SSR4-212ENST00000491833 AMOTL1Q8IY63 956 aa17.45■□□□□ 0.38
SSR4-212ENST00000491833 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.45■□□□□ 0.38
SSR4-212ENST00000491833 CCDC17Q96LX7 622 aa17.45■□□□□ 0.38
SSR4-212ENST00000491833 IL1RAPL2Q9NP60 686 aa17.45■□□□□ 0.38
SSR4-212ENST00000491833 TMEM39AQ9NV64 488 aa17.45■□□□□ 0.38
SSR4-212ENST00000491833 CNPY2Q9Y2B0 182 aa17.45■□□□□ 0.38
SSR4-212ENST00000491833 TCRBV5S4A2TA0A5A2 114 aa17.44■□□□□ 0.38
SSR4-212ENST00000491833 DNAJB2P25686 324 aa17.44■□□□□ 0.38
SSR4-212ENST00000491833 ZNF792Q3KQV3 632 aa17.44■□□□□ 0.38
SSR4-212ENST00000491833 SIAH1Q8IUQ4 282 aa17.44■□□□□ 0.38
SSR4-212ENST00000491833 ARMT1Q9H993 441 aa17.44■□□□□ 0.38
SSR4-212ENST00000491833 STARD7Q9NQZ5 370 aa17.44■□□□□ 0.38
SSR4-212ENST00000491833 BAZ2AQ9UIF9 1905 aaKnown RBP17.44■□□□□ 0.38
SSR4-212ENST00000491833 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.43■□□□□ 0.38
SSR4-212ENST00000491833 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.43■□□□□ 0.38
SSR4-212ENST00000491833 DCDC2CA8MYV0 355 aa17.43■□□□□ 0.38
SSR4-212ENST00000491833 ADAMTS4O75173 837 aa17.43■□□□□ 0.38
SSR4-212ENST00000491833 ZNF865P0CJ78 1059 aaPredicted RBP17.43■□□□□ 0.38
SSR4-212ENST00000491833 RLBP1P12271 317 aa17.43■□□□□ 0.38
SSR4-212ENST00000491833 TAL1P17542 331 aaPredicted RBP17.43■□□□□ 0.38
SSR4-212ENST00000491833 STAT3P40763 770 aa17.43■□□□□ 0.38
SSR4-212ENST00000491833 RHPN1Q8TCX5 695 aa17.43■□□□□ 0.38
SSR4-212ENST00000491833 NUP133Q8WUM0 1156 aa17.43■□□□□ 0.38
SSR4-212ENST00000491833 LENG1Q96BZ8 264 aaPredicted RBP17.43■□□□□ 0.38
SSR4-212ENST00000491833 TOX2Q96NM4 488 aa17.43■□□□□ 0.38
SSR4-212ENST00000491833 TSEN34Q9BSV6 310 aaKnown RBP17.43■□□□□ 0.38
SSR4-212ENST00000491833 GOPCQ9HD26 462 aa17.43■□□□□ 0.38
SSR4-212ENST00000491833 ATP8A2Q9NTI2 1148 aa17.43■□□□□ 0.38
SSR4-212ENST00000491833 PPP1R9AQ9ULJ8 1098 aa17.43■□□□□ 0.38
SSR4-212ENST00000491833 ADAMTS5Q9UNA0 930 aa17.43■□□□□ 0.38
SSR4-212ENST00000491833 SMCHD1A6NHR9 2005 aa17.43■□□□□ 0.38
SSR4-212ENST00000491833 SYNRGQ9UMZ2 1314 aa17.43■□□□□ 0.38
SSR4-212ENST00000491833 MOXD2PA6NHM9 499 aa17.42■□□□□ 0.38
SSR4-212ENST00000491833 VWA5AO00534 786 aa17.42■□□□□ 0.38
SSR4-212ENST00000491833 MBD4O95243 580 aa17.42■□□□□ 0.38
SSR4-212ENST00000491833 CDK8P49336 464 aa17.42■□□□□ 0.38
SSR4-212ENST00000491833 GRIN2CQ14957 1233 aa17.42■□□□□ 0.38
SSR4-212ENST00000491833 TJAP1Q5JTD0 557 aa17.42■□□□□ 0.38
SSR4-212ENST00000491833 ANKRD33Q7Z3H0 272 aa17.42■□□□□ 0.38
SSR4-212ENST00000491833 CLASRPQ8N2M8 674 aaKnown RBP17.42■□□□□ 0.38
SSR4-212ENST00000491833 FBXO28Q9NVF7 368 aa17.42■□□□□ 0.38
SSR4-212ENST00000491833 ZNF214Q9UL59 606 aaPredicted RBP17.42■□□□□ 0.38
SSR4-212ENST00000491833 PRKAB2O43741 272 aa17.41■□□□□ 0.38
SSR4-212ENST00000491833 RAD21O60216 631 aa17.41■□□□□ 0.38
SSR4-212ENST00000491833 EEF2P13639 858 aaKnown RBP17.41■□□□□ 0.38
SSR4-212ENST00000491833 ACLYP53396 1101 aa17.41■□□□□ 0.38
SSR4-212ENST00000491833 FAAP100Q0VG06 881 aa17.41■□□□□ 0.38
SSR4-212ENST00000491833 C16orf86Q6ZW13 317 aa17.41■□□□□ 0.38
SSR4-212ENST00000491833 MSL3Q8N5Y2 521 aaKnown RBP17.41■□□□□ 0.38
SSR4-212ENST00000491833 USP38Q8NB14 1042 aa17.41■□□□□ 0.38
SSR4-212ENST00000491833 DDRGK1Q96HY6 314 aa17.41■□□□□ 0.38
SSR4-212ENST00000491833 KANSL2Q9H9L4 492 aa17.41■□□□□ 0.38
SSR4-212ENST00000491833 MROH7Q68CQ1 1323 aa17.41■□□□□ 0.38
SSR4-212ENST00000491833 PRUNE2Q8WUY3 3088 aa17.41■□□□□ 0.38
SSR4-212ENST00000491833 IFIT2P09913 472 aaKnown RBP17.4■□□□□ 0.38
SSR4-212ENST00000491833 ADD2P35612 726 aa17.4■□□□□ 0.38
SSR4-212ENST00000491833 FAM83BQ5T0W9 1011 aa17.4■□□□□ 0.38
SSR4-212ENST00000491833 C12orf60Q5U649 245 aa17.4■□□□□ 0.38
SSR4-212ENST00000491833 CCDC174Q6PII3 467 aa17.4■□□□□ 0.38
SSR4-212ENST00000491833 REPS2Q8NFH8 660 aa17.4■□□□□ 0.38
SSR4-212ENST00000491833 TIFAQ96CG3 184 aa17.4■□□□□ 0.38
SSR4-212ENST00000491833 KIF1BPQ96EK5 621 aa17.4■□□□□ 0.38
SSR4-212ENST00000491833 ZNF576Q9H609 170 aa17.4■□□□□ 0.38
SSR4-212ENST00000491833 PAG1Q9NWQ8 432 aa17.4■□□□□ 0.38
SSR4-212ENST00000491833 FAM184BQ9ULE4 1060 aa17.4■□□□□ 0.38
SSR4-212ENST00000491833 SYNGAP1Q96PV0 1343 aa17.4■□□□□ 0.38
SSR4-212ENST00000491833 MYH7P12883 1935 aa17.39■□□□□ 0.37
SSR4-212ENST00000491833 GREB1LQ9C091 1923 aaPredicted RBP17.39■□□□□ 0.37
SSR4-212ENST00000491833 CYP2D7A0A087X1C5 515 aa17.39■□□□□ 0.37
SSR4-212ENST00000491833 TIMP1P01033 207 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms