RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 CKAP2LQ8IYA6 745 aa6.24□□□□□ -1.41
RTN4-215ENST00000491592 GPATCH11Q8N954 259 aa6.24□□□□□ -1.41
RTN4-215ENST00000491592 FAM181AQ8N9Y4 354 aa6.24□□□□□ -1.41
RTN4-215ENST00000491592 COX4I2Q96KJ9 171 aa6.24□□□□□ -1.41
RTN4-215ENST00000491592 HEXIM2Q96MH2 286 aaKnown RBP6.24□□□□□ -1.41
RTN4-215ENST00000491592 DNAJC2Q99543 621 aaKnown RBP6.24□□□□□ -1.41
RTN4-215ENST00000491592 ASPNQ9BXN1 380 aa6.24□□□□□ -1.41
RTN4-215ENST00000491592 TNKS2Q9H2K2 1166 aa6.24□□□□□ -1.41
RTN4-215ENST00000491592 LRRC4CQ9HCJ2 640 aa6.24□□□□□ -1.41
RTN4-215ENST00000491592 PIM2Q9P1W9 311 aa6.24□□□□□ -1.41
RTN4-215ENST00000491592 SUCOQ9UBS9 1254 aaKnown RBP6.24□□□□□ -1.41
RTN4-215ENST00000491592 LEMD3Q9Y2U8 911 aa6.24□□□□□ -1.41
RTN4-215ENST00000491592 GNAT3A8MTJ3 354 aa6.23□□□□□ -1.41
RTN4-215ENST00000491592 IGF2BP3O00425 579 aaKnown RBP eCLIP6.23□□□□□ -1.41
RTN4-215ENST00000491592 ZNF865P0CJ78 1059 aaPredicted RBP6.23□□□□□ -1.41
RTN4-215ENST00000491592 ITIH2P19823 946 aa6.23□□□□□ -1.41
RTN4-215ENST00000491592 PMS1P54277 932 aaKnown RBP6.23□□□□□ -1.41
RTN4-215ENST00000491592 TDRD10Q5VZ19 366 aaKnown RBP6.23□□□□□ -1.41
RTN4-215ENST00000491592 LARP1BQ659C4 914 aaKnown RBP6.23□□□□□ -1.41
RTN4-215ENST00000491592 PPFIBP1Q86W92 1011 aa6.23□□□□□ -1.41
RTN4-215ENST00000491592 MFSD4AQ8N468 514 aa6.23□□□□□ -1.41
RTN4-215ENST00000491592 ZNF512BQ96KM6 892 aaPredicted RBP6.23□□□□□ -1.41
RTN4-215ENST00000491592 UBA5Q9GZZ9 404 aa6.23□□□□□ -1.41
RTN4-215ENST00000491592 PHAXQ9H814 394 aaKnown RBP6.23□□□□□ -1.41
RTN4-215ENST00000491592 CNTNAP4Q9C0A0 1308 aa6.23□□□□□ -1.41
RTN4-215ENST00000491592 LTBP3Q9NS15 1303 aa6.23□□□□□ -1.41
RTN4-215ENST00000491592 PRR33A8MZF0 331 aa6.22□□□□□ -1.41
RTN4-215ENST00000491592 CYP26A1O43174 497 aa6.22□□□□□ -1.41
RTN4-215ENST00000491592 CEACAM5P06731 702 aa6.22□□□□□ -1.41
RTN4-215ENST00000491592 FOSL1P15407 271 aa6.22□□□□□ -1.41
RTN4-215ENST00000491592 KIR3DL1P43629 444 aa6.22□□□□□ -1.41
RTN4-215ENST00000491592 RALBP1Q15311 655 aa6.22□□□□□ -1.41
RTN4-215ENST00000491592 DHRS1Q96LJ7 313 aa6.22□□□□□ -1.41
RTN4-215ENST00000491592 MKRN2Q9H000 416 aaKnown RBP6.22□□□□□ -1.41
RTN4-215ENST00000491592 ZNF214Q9UL59 606 aaPredicted RBP6.22□□□□□ -1.41
RTN4-215ENST00000491592 R3HCC1Q9Y3T6 440 aaKnown RBP6.22□□□□□ -1.41
RTN4-215ENST00000491592 CAPN6Q9Y6Q1 641 aa6.22□□□□□ -1.41
RTN4-215ENST00000491592 B2RBV5 119 aa6.21□□□□□ -1.42
RTN4-215ENST00000491592 C9IYK1 514 aa6.21□□□□□ -1.42
RTN4-215ENST00000491592 RBAK-RBAKDNI3L0D1 243 aa6.21□□□□□ -1.42
RTN4-215ENST00000491592 KLF4O43474 513 aa6.21□□□□□ -1.42
RTN4-215ENST00000491592 CBX7O95931 251 aa6.21□□□□□ -1.42
RTN4-215ENST00000491592 OXCT1P55809 520 aa6.21□□□□□ -1.42
RTN4-215ENST00000491592 NBPF12Q5TAG4 269 aaPredicted RBP6.21□□□□□ -1.42
RTN4-215ENST00000491592 DPH6Q7L8W6 267 aa6.21□□□□□ -1.42
RTN4-215ENST00000491592 DTWD2Q8NBA8 298 aa6.21□□□□□ -1.42
RTN4-215ENST00000491592 SMARCC1Q92922 1105 aaPredicted RBP6.21□□□□□ -1.42
RTN4-215ENST00000491592 VWCEQ96DN2 955 aa6.21□□□□□ -1.42
RTN4-215ENST00000491592 Q96M66 194 aa6.21□□□□□ -1.42
RTN4-215ENST00000491592 TRIM55Q9BYV6 548 aa6.21□□□□□ -1.42
RTN4-215ENST00000491592 MKNK2Q9HBH9 465 aa6.21□□□□□ -1.42
RTN4-215ENST00000491592 FAM86C1Q9NVL1 165 aa6.21□□□□□ -1.42
RTN4-215ENST00000491592 CEP162Q5TB80 1403 aa6.2□□□□□ -1.42
RTN4-215ENST00000491592 MCCP23508 829 aa6.2□□□□□ -1.42
RTN4-215ENST00000491592 HOXA10P31260 410 aaPredicted RBP6.2□□□□□ -1.42
RTN4-215ENST00000491592 IGBP1P78318 339 aa6.2□□□□□ -1.42
RTN4-215ENST00000491592 RAB33AQ14088 237 aa6.2□□□□□ -1.42
RTN4-215ENST00000491592 DDR2Q16832 855 aa6.2□□□□□ -1.42
RTN4-215ENST00000491592 BBS9Q3SYG4 887 aa6.2□□□□□ -1.42
RTN4-215ENST00000491592 NBPF6Q5VWK0 638 aa6.2□□□□□ -1.42
RTN4-215ENST00000491592 VHLLQ6RSH7 139 aa6.2□□□□□ -1.42
RTN4-215ENST00000491592 C6orf15Q6UXA7 325 aaPredicted RBP6.2□□□□□ -1.42
RTN4-215ENST00000491592 ZNF662Q6ZS27 426 aa6.2□□□□□ -1.42
RTN4-215ENST00000491592 SPACA3Q8IXA5 215 aa6.2□□□□□ -1.42
RTN4-215ENST00000491592 PLD6Q8N2A8 252 aaKnown RBP6.2□□□□□ -1.42
RTN4-215ENST00000491592 CELF2-AS1Q8N7Q2 184 aa6.2□□□□□ -1.42
RTN4-215ENST00000491592 KLHL6Q8WZ60 621 aa6.2□□□□□ -1.42
RTN4-215ENST00000491592 NBPF4Q96M43 638 aa6.2□□□□□ -1.42
RTN4-215ENST00000491592 FBXL18Q96ME1 805 aa6.2□□□□□ -1.42
RTN4-215ENST00000491592 YTHDC1Q96MU7 727 aaKnown RBP6.2□□□□□ -1.42
RTN4-215ENST00000491592 PCDHB10Q9UN67 800 aa6.2□□□□□ -1.42
RTN4-215ENST00000491592 LAS1LQ9Y4W2 734 aaKnown RBP6.2□□□□□ -1.42
RTN4-215ENST00000491592 SCRIBQ14160 1630 aa6.19□□□□□ -1.42
RTN4-215ENST00000491592 FAM155AB1AL88 458 aaPredicted RBP6.19□□□□□ -1.42
RTN4-215ENST00000491592 ADAMTS4O75173 837 aa6.19□□□□□ -1.42
RTN4-215ENST00000491592 EIF3JO75822 258 aaKnown RBP6.19□□□□□ -1.42
RTN4-215ENST00000491592 SLC7A5Q01650 507 aa6.19□□□□□ -1.42
RTN4-215ENST00000491592 FXNQ16595 210 aa6.19□□□□□ -1.42
RTN4-215ENST00000491592 MSMPQ1L6U9 139 aa6.19□□□□□ -1.42
RTN4-215ENST00000491592 GNPTABQ3T906 1256 aa6.19□□□□□ -1.42
RTN4-215ENST00000491592 SMC5Q8IY18 1101 aa6.19□□□□□ -1.42
RTN4-215ENST00000491592 PMFBP1Q8TBY8 1022 aa6.19□□□□□ -1.42
RTN4-215ENST00000491592 SLC52A1Q9NWF4 448 aa6.19□□□□□ -1.42
RTN4-215ENST00000491592 TERF2IPQ9NYB0 399 aa6.19□□□□□ -1.42
RTN4-215ENST00000491592 ZC3H7BQ9UGR2 993 aaKnown RBP6.19□□□□□ -1.42
RTN4-215ENST00000491592 hCG_2014768A0A024R1R8 64 aa6.18□□□□□ -1.42
RTN4-215ENST00000491592 LRRN2O75325 713 aa6.18□□□□□ -1.42
RTN4-215ENST00000491592 IBSPP21815 317 aaPredicted RBP6.18□□□□□ -1.42
RTN4-215ENST00000491592 CLCN7P51798 805 aa6.18□□□□□ -1.42
RTN4-215ENST00000491592 TNK2Q07912 1038 aa6.18□□□□□ -1.42
RTN4-215ENST00000491592 RBL2Q08999 1139 aa6.18□□□□□ -1.42
RTN4-215ENST00000491592 SERINC3Q13530 473 aa6.18□□□□□ -1.42
RTN4-215ENST00000491592 FAM50AQ14320 339 aaKnown RBP6.18□□□□□ -1.42
RTN4-215ENST00000491592 IFI16Q16666 785 aaKnown RBP6.18□□□□□ -1.42
RTN4-215ENST00000491592 NKPD1Q17RQ9 610 aa6.18□□□□□ -1.42
RTN4-215ENST00000491592 HSP90AB2PQ58FF8 381 aa6.18□□□□□ -1.42
RTN4-215ENST00000491592 AXDND1Q5T1B0 1012 aaPredicted RBP6.18□□□□□ -1.42
RTN4-215ENST00000491592 FAM178BQ8IXR5 827 aa6.18□□□□□ -1.42
RTN4-215ENST00000491592 CCDC144CPQ8IYA2 1237 aa6.18□□□□□ -1.42
RTN4-215ENST00000491592 PIWIL2Q8TC59 973 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms