RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 RPTORQ8N122 1335 aa16.15■□□□□ 0.18
CDK9-204ENST00000491521 RLFQ13129 1914 aa16.14■□□□□ 0.17
CDK9-204ENST00000491521 PATL2C9JE40 543 aaKnown RBP16.14■□□□□ 0.17
CDK9-204ENST00000491521 HSPD1P10809 573 aaKnown RBP16.14■□□□□ 0.17
CDK9-204ENST00000491521 RASA1P20936 1047 aa16.14■□□□□ 0.17
CDK9-204ENST00000491521 MAP2K5Q13163 448 aa16.14■□□□□ 0.17
CDK9-204ENST00000491521 SBK1Q52WX2 424 aa16.14■□□□□ 0.17
CDK9-204ENST00000491521 VPS53Q5VIR6 699 aa16.14■□□□□ 0.17
CDK9-204ENST00000491521 GIMAP6Q6P9H5 292 aa16.14■□□□□ 0.17
CDK9-204ENST00000491521 DIS3LQ8TF46 1054 aaKnown RBP16.14■□□□□ 0.17
CDK9-204ENST00000491521 LPAR1Q92633 364 aa16.14■□□□□ 0.17
CDK9-204ENST00000491521 USP6NLQ92738 828 aa16.14■□□□□ 0.17
CDK9-204ENST00000491521 HTATIP2Q9BUP3 242 aa16.14■□□□□ 0.17
CDK9-204ENST00000491521 NACAP1Q9BZK3 213 aa16.14■□□□□ 0.17
CDK9-204ENST00000491521 LSG1Q9H089 658 aaKnown RBP16.14■□□□□ 0.17
CDK9-204ENST00000491521 GOPCQ9HD26 462 aa16.14■□□□□ 0.17
CDK9-204ENST00000491521 XRCC5P13010 732 aaKnown RBP16.13■□□□□ 0.17
CDK9-204ENST00000491521 PTPREP23469 700 aa16.13■□□□□ 0.17
CDK9-204ENST00000491521 DSG3P32926 999 aa16.13■□□□□ 0.17
CDK9-204ENST00000491521 CACNB2Q08289 660 aaPredicted RBP16.13■□□□□ 0.17
CDK9-204ENST00000491521 LBX2Q6XYB7 198 aa16.13■□□□□ 0.17
CDK9-204ENST00000491521 UBE2Q1Q7Z7E8 422 aa16.13■□□□□ 0.17
CDK9-204ENST00000491521 IFNL3Q8IZI9 196 aa16.13■□□□□ 0.17
CDK9-204ENST00000491521 PAWRQ96IZ0 340 aaKnown RBP16.13■□□□□ 0.17
CDK9-204ENST00000491521 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.13■□□□□ 0.17
CDK9-204ENST00000491521 MOV10L1Q9BXT6 1211 aaKnown RBP16.13■□□□□ 0.17
CDK9-204ENST00000491521 USP26Q9BXU7 913 aa16.13■□□□□ 0.17
CDK9-204ENST00000491521 SPATC1LQ9H0A9 340 aa16.13■□□□□ 0.17
CDK9-204ENST00000491521 FBXO28Q9NVF7 368 aa16.13■□□□□ 0.17
CDK9-204ENST00000491521 SLC15A5A6NIM6 579 aa16.12■□□□□ 0.17
CDK9-204ENST00000491521 WDR46O15213 610 aaKnown RBP16.12■□□□□ 0.17
CDK9-204ENST00000491521 MCCP23508 829 aa16.12■□□□□ 0.17
CDK9-204ENST00000491521 CCND3P30281 292 aaPredicted RBP16.12■□□□□ 0.17
CDK9-204ENST00000491521 FAM83BQ5T0W9 1011 aa16.12■□□□□ 0.17
CDK9-204ENST00000491521 NCAPG2Q86XI2 1143 aa16.12■□□□□ 0.17
CDK9-204ENST00000491521 TRMT44Q8IYL2 757 aaKnown RBP16.12■□□□□ 0.17
CDK9-204ENST00000491521 ZNF444Q8N0Y2 327 aaPredicted RBP16.12■□□□□ 0.17
CDK9-204ENST00000491521 MAP4K1Q92918 833 aa16.12■□□□□ 0.17
CDK9-204ENST00000491521 NUP88Q99567 741 aaPredicted RBP16.12■□□□□ 0.17
CDK9-204ENST00000491521 DSCC1Q9BVC3 393 aa16.12■□□□□ 0.17
CDK9-204ENST00000491521 CRISPLD2Q9H0B8 497 aa16.12■□□□□ 0.17
CDK9-204ENST00000491521 NAPBQ9H115 298 aa16.12■□□□□ 0.17
CDK9-204ENST00000491521 FLRT1Q9NZU1 646 aa16.12■□□□□ 0.17
CDK9-204ENST00000491521 U3KPZ7 1027 aaPredicted RBP16.12■□□□□ 0.17
CDK9-204ENST00000491521 COL11A1P12107 1806 aaPredicted RBP16.12■□□□□ 0.17
CDK9-204ENST00000491521 ROBO3Q96MS0 1386 aa16.12■□□□□ 0.17
CDK9-204ENST00000491521 MYH4Q9Y623 1939 aa16.11■□□□□ 0.17
CDK9-204ENST00000491521 A0A0G2JMZ2 1700 aa16.11■□□□□ 0.17
CDK9-204ENST00000491521 PARP14Q460N5 1801 aa16.11■□□□□ 0.17
CDK9-204ENST00000491521 ERCC3P19447 782 aa16.11■□□□□ 0.17
CDK9-204ENST00000491521 GRB14Q14449 540 aa16.11■□□□□ 0.17
CDK9-204ENST00000491521 MFSD14CQ5VZR4 134 aa16.11■□□□□ 0.17
CDK9-204ENST00000491521 DPP9Q86TI2 863 aa16.11■□□□□ 0.17
CDK9-204ENST00000491521 CHMP4CQ96CF2 233 aa16.11■□□□□ 0.17
CDK9-204ENST00000491521 C22orf23Q9BZE7 217 aa16.11■□□□□ 0.17
CDK9-204ENST00000491521 CLIP2Q9UDT6 1046 aa16.11■□□□□ 0.17
CDK9-204ENST00000491521 CTNNA3Q9UI47 895 aa16.11■□□□□ 0.17
CDK9-204ENST00000491521 RBM8AQ9Y5S9 174 aaKnown RBP16.11■□□□□ 0.17
CDK9-204ENST00000491521 GREB1LQ9C091 1923 aaPredicted RBP16.11■□□□□ 0.17
CDK9-204ENST00000491521 DNAH12Q6ZR08 3092 aa16.1■□□□□ 0.17
CDK9-204ENST00000491521 ADORA2AP29274 412 aa16.1■□□□□ 0.17
CDK9-204ENST00000491521 CNGA1P29973 690 aa16.1■□□□□ 0.17
CDK9-204ENST00000491521 FAM47AQ5JRC9 791 aa16.1■□□□□ 0.17
CDK9-204ENST00000491521 MAP3K21Q5TCX8 1036 aa16.1■□□□□ 0.17
CDK9-204ENST00000491521 NECAB2Q7Z6G3 386 aa16.1■□□□□ 0.17
CDK9-204ENST00000491521 MB21D1Q8N884 522 aa16.1■□□□□ 0.17
CDK9-204ENST00000491521 NPLOC4Q8TAT6 608 aa16.1■□□□□ 0.17
CDK9-204ENST00000491521 ISY1Q9ULR0 285 aaKnown RBP16.1■□□□□ 0.17
CDK9-204ENST00000491521 EPB41L2O43491 1005 aaKnown RBP16.09■□□□□ 0.17
CDK9-204ENST00000491521 EVI5O60447 810 aa16.09■□□□□ 0.17
CDK9-204ENST00000491521 FGAP02671 866 aa16.09■□□□□ 0.17
CDK9-204ENST00000491521 SLC3A2P08195 630 aaKnown RBP16.09■□□□□ 0.17
CDK9-204ENST00000491521 CYP2C19P33261 490 aa16.09■□□□□ 0.17
CDK9-204ENST00000491521 SLC4A3P48751 1232 aa16.09■□□□□ 0.17
CDK9-204ENST00000491521 CTDSPL2Q05D32 466 aa16.09■□□□□ 0.17
CDK9-204ENST00000491521 TMEM132BQ14DG7 1078 aa16.09■□□□□ 0.17
CDK9-204ENST00000491521 HABP4Q5JVS0 413 aaKnown RBP16.09■□□□□ 0.17
CDK9-204ENST00000491521 ZNF287Q9HBT7 754 aa16.09■□□□□ 0.17
CDK9-204ENST00000491521 COLQQ9Y215 455 aaPredicted RBP16.09■□□□□ 0.17
CDK9-204ENST00000491521 TRIOBPQ9H2D6 2365 aa16.08■□□□□ 0.17
CDK9-204ENST00000491521 RANBP2P49792 3224 aaKnown RBP16.08■□□□□ 0.17
CDK9-204ENST00000491521 NDUFB10O96000 172 aa16.08■□□□□ 0.16
CDK9-204ENST00000491521 TSPY3P0CV98 308 aa16.08■□□□□ 0.16
CDK9-204ENST00000491521 TSPY8P0CW00 308 aa16.08■□□□□ 0.16
CDK9-204ENST00000491521 PDE4BQ07343 736 aa16.08■□□□□ 0.16
CDK9-204ENST00000491521 PPARAQ07869 468 aa16.08■□□□□ 0.16
CDK9-204ENST00000491521 ALX1Q15699 326 aa16.08■□□□□ 0.16
CDK9-204ENST00000491521 RNF20Q5VTR2 975 aa16.08■□□□□ 0.16
CDK9-204ENST00000491521 CHRDL2Q6WN34 429 aa16.08■□□□□ 0.16
CDK9-204ENST00000491521 LRRC47Q8N1G4 583 aaKnown RBP16.08■□□□□ 0.16
CDK9-204ENST00000491521 CEP95Q96GE4 821 aa16.08■□□□□ 0.16
CDK9-204ENST00000491521 INCENPQ9NQS7 918 aa16.08■□□□□ 0.16
CDK9-204ENST00000491521 NYAP2Q9P242 653 aa16.08■□□□□ 0.16
CDK9-204ENST00000491521 NR2E3Q9Y5X4 410 aa16.08■□□□□ 0.16
CDK9-204ENST00000491521 ALPK3Q96L96 1907 aa16.07■□□□□ 0.16
CDK9-204ENST00000491521 F5H6K3 240 aa16.07■□□□□ 0.16
CDK9-204ENST00000491521 ZNF213O14771 459 aa16.07■□□□□ 0.16
CDK9-204ENST00000491521 FOXP2O15409 715 aa16.07■□□□□ 0.16
CDK9-204ENST00000491521 TFAP4Q01664 338 aa16.07■□□□□ 0.16
CDK9-204ENST00000491521 KLRC3Q07444 240 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms