RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 ZYXQ15942 572 aaKnown RBP25.31■■□□□ 1.64
VCPKMT-204ENST00000491402 SLFN13Q68D06 897 aa25.31■■□□□ 1.64
VCPKMT-204ENST00000491402 ERO1BQ86YB8 467 aa25.31■■□□□ 1.64
VCPKMT-204ENST00000491402 RASAL3Q86YV0 1011 aa25.31■■□□□ 1.64
VCPKMT-204ENST00000491402 STAG2Q8N3U4 1231 aa25.31■■□□□ 1.64
VCPKMT-204ENST00000491402 VCPKMTQ9H867 229 aa25.31■■□□□ 1.64
VCPKMT-204ENST00000491402 PALM3A6NDB9 673 aaPredicted RBP25.31■■□□□ 1.64
VCPKMT-204ENST00000491402 SPDYE5A6NIY4 337 aa25.31■■□□□ 1.64
VCPKMT-204ENST00000491402 USP17L10C9JJH3 530 aa25.31■■□□□ 1.64
VCPKMT-204ENST00000491402 DTNBO60941 627 aa25.31■■□□□ 1.64
VCPKMT-204ENST00000491402 MTMR2Q13614 643 aa25.31■■□□□ 1.64
VCPKMT-204ENST00000491402 NTRK3Q16288 839 aa25.31■■□□□ 1.64
VCPKMT-204ENST00000491402 NSUN7Q8NE18 718 aaKnown RBP25.31■■□□□ 1.64
VCPKMT-204ENST00000491402 CCDC102AQ96A19 550 aa25.31■■□□□ 1.64
VCPKMT-204ENST00000491402 LLPHQ9BRT6 129 aaKnown RBP25.31■■□□□ 1.64
VCPKMT-204ENST00000491402 AFG3L2Q9Y4W6 797 aa25.31■■□□□ 1.64
VCPKMT-204ENST00000491402 TRIM75PA6NK02 468 aa25.3■■□□□ 1.64
VCPKMT-204ENST00000491402 GOLGA8HP0CJ92 632 aa25.3■■□□□ 1.64
VCPKMT-204ENST00000491402 GJA5P36382 358 aa25.3■■□□□ 1.64
VCPKMT-204ENST00000491402 SLC1A4P43007 532 aa25.3■■□□□ 1.64
VCPKMT-204ENST00000491402 ASPRV1Q53RT3 343 aa25.3■■□□□ 1.64
VCPKMT-204ENST00000491402 KIAA1755Q5JYT7 1200 aa25.3■■□□□ 1.64
VCPKMT-204ENST00000491402 SPICE1Q8N0Z3 855 aa25.3■■□□□ 1.64
VCPKMT-204ENST00000491402 DCAF4Q8WV16 495 aa25.3■■□□□ 1.64
VCPKMT-204ENST00000491402 GMCL1Q96IK5 515 aa25.3■■□□□ 1.64
VCPKMT-204ENST00000491402 WNK4Q96J92 1243 aa25.3■■□□□ 1.64
VCPKMT-204ENST00000491402 CAPNS2Q96L46 248 aa25.3■■□□□ 1.64
VCPKMT-204ENST00000491402 CEP350Q5VT06 3117 aa25.29■■□□□ 1.64
VCPKMT-204ENST00000491402 FAM155AB1AL88 458 aaPredicted RBP25.29■■□□□ 1.64
VCPKMT-204ENST00000491402 PLEKHA8P1O95397 391 aa25.29■■□□□ 1.64
VCPKMT-204ENST00000491402 BACE1P56817 501 aa25.29■■□□□ 1.64
VCPKMT-204ENST00000491402 PPATQ06203 517 aa25.29■■□□□ 1.64
VCPKMT-204ENST00000491402 ZNF543Q08ER8 600 aa25.29■■□□□ 1.64
VCPKMT-204ENST00000491402 SPRYD7Q5W111 196 aa25.29■■□□□ 1.64
VCPKMT-204ENST00000491402 CPLX2Q6PUV4 134 aaKnown RBP25.29■■□□□ 1.64
VCPKMT-204ENST00000491402 TMTC3Q6ZXV5 915 aa25.29■■□□□ 1.64
VCPKMT-204ENST00000491402 CMTR1Q8N1G2 835 aaKnown RBP25.29■■□□□ 1.64
VCPKMT-204ENST00000491402 FRMPD2Q68DX3 1309 aaPredicted RBP25.29■■□□□ 1.64
VCPKMT-204ENST00000491402 BAZ2BQ9UIF8 2168 aaKnown RBP25.29■■□□□ 1.64
VCPKMT-204ENST00000491402 JAK2O60674 1132 aa25.28■■□□□ 1.64
VCPKMT-204ENST00000491402 CDKL5O76039 1030 aa25.28■■□□□ 1.64
VCPKMT-204ENST00000491402 SLC10A3P09131 477 aa25.28■■□□□ 1.64
VCPKMT-204ENST00000491402 GPATCH4Q5T3I0 446 aaKnown RBP25.28■■□□□ 1.64
VCPKMT-204ENST00000491402 PTPDC1A2A3K4 754 aa25.28■■□□□ 1.64
VCPKMT-204ENST00000491402 IRF6O14896 467 aa25.28■■□□□ 1.64
VCPKMT-204ENST00000491402 MYH6P13533 1939 aa25.28■■□□□ 1.64
VCPKMT-204ENST00000491402 IFNAR1P17181 557 aa25.28■■□□□ 1.64
VCPKMT-204ENST00000491402 VEGFBP49765 207 aa25.28■■□□□ 1.64
VCPKMT-204ENST00000491402 CCDC96Q2M329 555 aa25.28■■□□□ 1.64
VCPKMT-204ENST00000491402 SMC3Q9UQE7 1217 aa25.28■■□□□ 1.64
VCPKMT-204ENST00000491402 KLRF2D3W0D1 207 aa25.27■■□□□ 1.64
VCPKMT-204ENST00000491402 PPFIA3O75145 1194 aa25.27■■□□□ 1.64
VCPKMT-204ENST00000491402 GNAQP50148 359 aa25.27■■□□□ 1.64
VCPKMT-204ENST00000491402 USP14P54578 494 aa25.27■■□□□ 1.64
VCPKMT-204ENST00000491402 KCTD1Q719H9 257 aa25.27■■□□□ 1.64
VCPKMT-204ENST00000491402 CCDC82Q8N4S0 544 aa25.27■■□□□ 1.64
VCPKMT-204ENST00000491402 SRBD1Q8N5C6 995 aaKnown RBP25.27■■□□□ 1.64
VCPKMT-204ENST00000491402 SMARCC2Q8TAQ2 1214 aa25.27■■□□□ 1.64
VCPKMT-204ENST00000491402 LPAR1Q92633 364 aa25.27■■□□□ 1.64
VCPKMT-204ENST00000491402 NUP88Q99567 741 aaPredicted RBP25.27■■□□□ 1.64
VCPKMT-204ENST00000491402 FUT2Q10981 343 aa25.26■■□□□ 1.63
VCPKMT-204ENST00000491402 PPIL2Q13356 520 aa25.26■■□□□ 1.63
VCPKMT-204ENST00000491402 PHKBQ93100 1093 aa25.26■■□□□ 1.63
VCPKMT-204ENST00000491402 WDR33Q9C0J8 1336 aaKnown RBP25.26■■□□□ 1.63
VCPKMT-204ENST00000491402 C19orf81C9J6K1 198 aa25.26■■□□□ 1.63
VCPKMT-204ENST00000491402 ZBTB48P10074 688 aaPredicted RBP25.26■■□□□ 1.63
VCPKMT-204ENST00000491402 BMP3P12645 472 aa25.26■■□□□ 1.63
VCPKMT-204ENST00000491402 DGKZQ13574 1117 aa25.26■■□□□ 1.63
VCPKMT-204ENST00000491402 NBPF11Q86T75 865 aa25.26■■□□□ 1.63
VCPKMT-204ENST00000491402 ZIC5Q96T25 663 aa25.26■■□□□ 1.63
VCPKMT-204ENST00000491402 LZTS2Q9BRK4 669 aa25.26■■□□□ 1.63
VCPKMT-204ENST00000491402 GPCPD1Q9NPB8 672 aa25.26■■□□□ 1.63
VCPKMT-204ENST00000491402 EMILIN3Q9NT22 766 aa25.26■■□□□ 1.63
VCPKMT-204ENST00000491402 ISY1Q9ULR0 285 aaKnown RBP25.26■■□□□ 1.63
VCPKMT-204ENST00000491402 CNTNAP5Q8WYK1 1306 aa25.25■■□□□ 1.63
VCPKMT-204ENST00000491402 AOC2O75106 756 aa25.25■■□□□ 1.63
VCPKMT-204ENST00000491402 GJB2P29033 226 aa25.25■■□□□ 1.63
VCPKMT-204ENST00000491402 HMGN5P82970 282 aaKnown RBP25.25■■□□□ 1.63
VCPKMT-204ENST00000491402 DDX11Q96FC9 970 aa25.25■■□□□ 1.63
VCPKMT-204ENST00000491402 HMGCS2P54868 508 aa25.24■■□□□ 1.63
VCPKMT-204ENST00000491402 CPVLQ9H3G5 476 aa25.24■■□□□ 1.63
VCPKMT-204ENST00000491402 SLC35G1Q2M3R5 365 aa25.23■■□□□ 1.63
VCPKMT-204ENST00000491402 FAM83BQ5T0W9 1011 aa25.23■■□□□ 1.63
VCPKMT-204ENST00000491402 TTBK2Q6IQ55 1244 aa25.23■■□□□ 1.63
VCPKMT-204ENST00000491402 C12orf42Q96LP6 360 aa25.23■■□□□ 1.63
VCPKMT-204ENST00000491402 SLC26A6Q9BXS9 759 aa25.23■■□□□ 1.63
VCPKMT-204ENST00000491402 WDR46O15213 610 aaKnown RBP25.23■■□□□ 1.63
VCPKMT-204ENST00000491402 CYTH3O43739 400 aa25.23■■□□□ 1.63
VCPKMT-204ENST00000491402 FMNL1O95466 1100 aaPredicted RBP25.23■■□□□ 1.63
VCPKMT-204ENST00000491402 FDPSP14324 419 aaKnown RBP25.23■■□□□ 1.63
VCPKMT-204ENST00000491402 VCAM1P19320 739 aa25.23■■□□□ 1.63
VCPKMT-204ENST00000491402 TRIM22Q8IYM9 498 aa25.23■■□□□ 1.63
VCPKMT-204ENST00000491402 SPZ1Q9BXG8 430 aa25.23■■□□□ 1.63
VCPKMT-204ENST00000491402 RNF26Q9BY78 433 aaPredicted RBP25.23■■□□□ 1.63
VCPKMT-204ENST00000491402 UBA5Q9GZZ9 404 aa25.23■■□□□ 1.63
VCPKMT-204ENST00000491402 CWC22Q9HCG8 908 aaKnown RBP25.23■■□□□ 1.63
VCPKMT-204ENST00000491402 LOC285556D6RIA3 1793 aa25.23■■□□□ 1.63
VCPKMT-204ENST00000491402 STK36Q9NRP7 1315 aa25.22■■□□□ 1.63
VCPKMT-204ENST00000491402 SMARCA1P28370 1054 aa25.22■■□□□ 1.63
VCPKMT-204ENST00000491402 KIF23Q02241 960 aaPredicted RBP25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms