RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	ADAMTS19	Q8TE59	1207 aa		23.37	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	FAM122A	Q96E09	287 aa		23.37	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	DBNL	Q9UJU6	430 aa	Known RBP	23.37	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	PLA2G5	P39877	138 aa		23.36	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	ACLY	P53396	1101 aa		23.36	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	PPIG	Q13427	754 aa	Known RBP eCLIP	23.36	■■□□□ 1.33	1e-7	■■□□□ 12.3
CDK5RAP2-218	ENST00000491334	KIAA1755	Q5JYT7	1200 aa		23.36	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	SAMD1	Q6SPF0	538 aa	Predicted RBP	23.36	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	CCDC8	Q9H0W5	538 aa	Predicted RBP	23.36	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	PRDM12	Q9H4Q4	367 aa		23.36	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	SH2D4A	Q9H788	454 aa		23.36	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	ARHGEF10L	Q9HCE6	1279 aa		23.36	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	MCM9	Q9NXL9	1143 aa		23.36	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	CNPY2	Q9Y2B0	182 aa		23.36	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	MYO5A	Q9Y4I1	1855 aa	Known RBP	23.35	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	MOXD2P	A6NHM9	499 aa		23.35	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	PGK2	P07205	417 aa		23.35	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	ZNF865	P0CJ78	1059 aa	Predicted RBP	23.35	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	TAL1	P17542	331 aa	Predicted RBP	23.35	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	ATP8B2	P98198	1209 aa		23.35	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	TMEM132B	Q14DG7	1078 aa		23.35	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	ZNF792	Q3KQV3	632 aa		23.35	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	SPICE1	Q8N0Z3	855 aa		23.35	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	SSH3	Q8TE77	659 aa		23.35	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	UHRF1	Q96T88	793 aa	Predicted RBP	23.35	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	RIOK1	Q9BRS2	568 aa	Known RBP	23.35	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	PBX4	Q9BYU1	374 aa		23.35	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	CRNKL1	Q9BZJ0	848 aa	Known RBP	23.35	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	TMX2	Q9Y320	296 aa		23.35	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	MAGEB6P1	A0A0J9YX57	407 aa		23.34	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	TMEM240	Q5SV17	173 aa		23.34	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	RIOX2	Q8IUF8	465 aa		23.34	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	MROH7	Q68CQ1	1323 aa		23.33	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	ADAMTS4	O75173	837 aa		23.33	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	TRIM27	P14373	513 aa		23.33	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	KCNA10	Q16322	511 aa		23.33	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	C16orf59	Q7L2K0	433 aa		23.33	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	TMEM199	Q8N511	208 aa		23.33	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	ANTXR1	Q9H6X2	564 aa		23.33	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	VCPKMT	Q9H867	229 aa		23.33	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	TLR7	Q9NYK1	1049 aa	Known RBP	23.33	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	SWAP70	Q9UH65	585 aa		23.33	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	MSRA	Q9UJ68	235 aa		23.33	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	TBX21	Q9UL17	535 aa		23.33	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	FAM184B	Q9ULE4	1060 aa		23.33	■■□□□ 1.33
CDK5RAP2-218	ENST00000491334	ROBO3	Q96MS0	1386 aa		23.32	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	GRXCR1	A8MXD5	290 aa		23.32	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	WDR46	O15213	610 aa	Known RBP	23.32	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	COPB2	P35606	906 aa		23.32	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	PBX2	P40425	430 aa		23.32	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	STAT3	P40763	770 aa		23.32	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	CCDC85B	Q15834	202 aa	Predicted RBP	23.32	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	SIAH1	Q8IUQ4	282 aa		23.32	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	KLHDC9	Q8NEP7	349 aa		23.32	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	EAF2	Q96CJ1	260 aa	Predicted RBP	23.32	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	GLT1D1	Q96MS3	346 aa		23.32	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	ADAMTS5	Q9UNA0	930 aa		23.32	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	NOP58	Q9Y2X3	529 aa	Known RBP	23.32	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	ELP1	O95163	1332 aa		23.32	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	ZNFX1	Q9P2E3	1918 aa	Known RBP	23.31	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	BCAR3	O75815	825 aa		23.31	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	IGFBP4	P22692	258 aa		23.31	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	RASIP1	Q5U651	963 aa		23.31	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	MSL3	Q8N5Y2	521 aa	Known RBP	23.31	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	FRAT1	Q92837	279 aa	Predicted RBP	23.31	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	VTI1A	Q96AJ9	217 aa		23.31	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	TSPYL2	Q9H2G4	693 aa	Predicted RBP	23.31	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	ICA1	Q05084	483 aa		23.3	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	RAB30	Q15771	203 aa		23.3	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	PSRC1	Q6PGN9	363 aa	Predicted RBP	23.3	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	CLUAP1	Q96AJ1	413 aa		23.3	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	LENG1	Q96BZ8	264 aa	Predicted RBP	23.3	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	SYNRG	Q9UMZ2	1314 aa		23.3	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	CSF2RA	P15509	400 aa		23.29	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	CDK7	P50613	346 aa		23.29	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	TTF1	Q15361	905 aa	Predicted RBP	23.29	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	CCSAP	Q6IQ19	270 aa	Predicted RBP	23.29	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	ZNF365	Q70YC5	407 aa		23.29	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	PCSK9	Q8NBP7	692 aa	Known RBP	23.29	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	CCDC17	Q96LX7	622 aa		23.29	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	C1QTNF1	Q9BXJ1	281 aa		23.29	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334		A0A0G2JMZ2	1700 aa		23.28	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	VWA5A	O00534	786 aa		23.28	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	DUSP11	O75319	330 aa	Known RBP	23.28	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	EVX2	Q03828	476 aa		23.28	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	ADGRE1	Q14246	886 aa		23.28	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	SLC9C2	Q5TAH2	1124 aa		23.28	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	SPC25	Q9HBM1	224 aa		23.28	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	DCP1A	Q9NPI6	582 aa	Predicted RBP	23.28	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	ZNF316	A6NFI3	1004 aa	Predicted RBP	23.27	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	ACR	P10323	421 aa		23.27	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	DDX11	Q96FC9	970 aa		23.27	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	MTIF3	Q9H2K0	278 aa	Known RBP	23.27	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	SLC28A3	Q9HAS3	691 aa		23.27	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	TNN	Q9UQP3	1299 aa		23.27	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	SYNGAP1	Q96PV0	1343 aa		23.27	■■□□□ 1.32
CDK5RAP2-218	ENST00000491334	ARVCF	O00192	962 aa		23.26	■■□□□ 1.31
CDK5RAP2-218	ENST00000491334	TLR3	O15455	904 aa	Known RBP	23.26	■■□□□ 1.31
CDK5RAP2-218	ENST00000491334	AKR1B1	P15121	316 aa		23.26	■■□□□ 1.31
CDK5RAP2-218	ENST00000491334	CST5	P28325	142 aa	Predicted RBP	23.26	■■□□□ 1.31

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms