RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 MINDY4BA8MYZ0 360 aa18.82■□□□□ 0.6
SMPD4-220ENST00000491319 RAD21O60216 631 aa18.82■□□□□ 0.6
SMPD4-220ENST00000491319 COBLO75128 1261 aa18.82■□□□□ 0.6
SMPD4-220ENST00000491319 RASA1P20936 1047 aa18.82■□□□□ 0.6
SMPD4-220ENST00000491319 TMEM132BQ14DG7 1078 aa18.82■□□□□ 0.6
SMPD4-220ENST00000491319 LRRC26Q2I0M4 334 aa18.82■□□□□ 0.6
SMPD4-220ENST00000491319 OTUD7AQ8TE49 926 aaPredicted RBP18.82■□□□□ 0.6
SMPD4-220ENST00000491319 GDF15Q99988 308 aa18.82■□□□□ 0.6
SMPD4-220ENST00000491319 MROH8Q9H579 483 aa18.82■□□□□ 0.6
SMPD4-220ENST00000491319 GOPCQ9HD26 462 aa18.82■□□□□ 0.6
SMPD4-220ENST00000491319 ZFYP08048 801 aaPredicted RBP18.81■□□□□ 0.6
SMPD4-220ENST00000491319 FAM83BQ5T0W9 1011 aa18.81■□□□□ 0.6
SMPD4-220ENST00000491319 OLFML2BQ68BL8 750 aa18.81■□□□□ 0.6
SMPD4-220ENST00000491319 GIMAP6Q6P9H5 292 aa18.81■□□□□ 0.6
SMPD4-220ENST00000491319 PI4K2BQ8TCG2 481 aa18.81■□□□□ 0.6
SMPD4-220ENST00000491319 ADAMTS5Q9UNA0 930 aa18.81■□□□□ 0.6
SMPD4-220ENST00000491319 DNAH12Q6ZR08 3092 aa18.81■□□□□ 0.6
SMPD4-220ENST00000491319 TTC41PQ6P2S7 1318 aa18.8■□□□□ 0.6
SMPD4-220ENST00000491319 SOX1O00570 391 aaPredicted RBP18.8■□□□□ 0.6
SMPD4-220ENST00000491319 MSCO60682 206 aa18.8■□□□□ 0.6
SMPD4-220ENST00000491319 MKNK2Q9HBH9 465 aa18.8■□□□□ 0.6
SMPD4-220ENST00000491319 MAGEA10P43363 369 aaPredicted RBP18.79■□□□□ 0.6
SMPD4-220ENST00000491319 TDO2P48775 406 aa18.79■□□□□ 0.6
SMPD4-220ENST00000491319 RRP1P56182 461 aaKnown RBP18.79■□□□□ 0.6
SMPD4-220ENST00000491319 ABRAQ8N0Z2 381 aa18.79■□□□□ 0.6
SMPD4-220ENST00000491319 SEC62Q99442 399 aaKnown RBP18.79■□□□□ 0.6
SMPD4-220ENST00000491319 NUP88Q99567 741 aaPredicted RBP18.79■□□□□ 0.6
SMPD4-220ENST00000491319 PPP1R9AQ9ULJ8 1098 aa18.79■□□□□ 0.6
SMPD4-220ENST00000491319 VWA5AO00534 786 aa18.78■□□□□ 0.6
SMPD4-220ENST00000491319 ERC2O15083 957 aa18.78■□□□□ 0.6
SMPD4-220ENST00000491319 PRDM1O75626 825 aa18.78■□□□□ 0.6
SMPD4-220ENST00000491319 SLC25A27O95847 323 aa18.78■□□□□ 0.6
SMPD4-220ENST00000491319 APPP05067 770 aa18.78■□□□□ 0.6
SMPD4-220ENST00000491319 FCER1AP12319 257 aa18.78■□□□□ 0.6
SMPD4-220ENST00000491319 GNAT2P19087 354 aa18.78■□□□□ 0.6
SMPD4-220ENST00000491319 BMP8BP34820 402 aa18.78■□□□□ 0.6
SMPD4-220ENST00000491319 ANO1Q5XXA6 986 aa18.78■□□□□ 0.6
SMPD4-220ENST00000491319 RIOX2Q8IUF8 465 aa18.78■□□□□ 0.6
SMPD4-220ENST00000491319 REPS2Q8NFH8 660 aa18.78■□□□□ 0.6
SMPD4-220ENST00000491319 LRCH3Q96II8 777 aa18.78■□□□□ 0.6
SMPD4-220ENST00000491319 MAML3Q96JK9 1138 aa18.78■□□□□ 0.6
SMPD4-220ENST00000491319 SENP6Q9GZR1 1112 aaPredicted RBP18.78■□□□□ 0.6
SMPD4-220ENST00000491319 SLC5A4Q9NY91 659 aa18.78■□□□□ 0.6
SMPD4-220ENST00000491319 ZNF214Q9UL59 606 aaPredicted RBP18.78■□□□□ 0.6
SMPD4-220ENST00000491319 DNM1LO00429 736 aa18.77■□□□□ 0.6
SMPD4-220ENST00000491319 PRAMEF19Q5SWL8 479 aa18.77■□□□□ 0.6
SMPD4-220ENST00000491319 MMP19Q99542 508 aa18.77■□□□□ 0.6
SMPD4-220ENST00000491319 FSD1Q9BTV5 496 aa18.77■□□□□ 0.6
SMPD4-220ENST00000491319 NYAP2Q9P242 653 aa18.77■□□□□ 0.6
SMPD4-220ENST00000491319 IGKV6D-41A0A0C4DH26 115 aa18.76■□□□□ 0.59
SMPD4-220ENST00000491319 NDUFB10O96000 172 aa18.76■□□□□ 0.59
SMPD4-220ENST00000491319 PGK2P07205 417 aa18.76■□□□□ 0.59
SMPD4-220ENST00000491319 MX1P20591 662 aa18.76■□□□□ 0.59
SMPD4-220ENST00000491319 LRRFIP1Q32MZ4 808 aaKnown RBP18.76■□□□□ 0.59
SMPD4-220ENST00000491319 GJC2Q5T442 439 aaPredicted RBP18.76■□□□□ 0.59
SMPD4-220ENST00000491319 IFNL3Q8IZI9 196 aa18.76■□□□□ 0.59
SMPD4-220ENST00000491319 SLF1Q9BQI6 1058 aa18.76■□□□□ 0.59
SMPD4-220ENST00000491319 SALL3Q9BXA9 1300 aa18.75■□□□□ 0.59
SMPD4-220ENST00000491319 PATL2C9JE40 543 aaKnown RBP18.75■□□□□ 0.59
SMPD4-220ENST00000491319 F5H6K3 240 aa18.75■□□□□ 0.59
SMPD4-220ENST00000491319 SEPT4O43236 478 aa18.75■□□□□ 0.59
SMPD4-220ENST00000491319 STAT3P40763 770 aa18.75■□□□□ 0.59
SMPD4-220ENST00000491319 ATN1P54259 1190 aaPredicted RBP18.75■□□□□ 0.59
SMPD4-220ENST00000491319 KLRC3Q07444 240 aa18.75■□□□□ 0.59
SMPD4-220ENST00000491319 CEP95Q96GE4 821 aa18.75■□□□□ 0.59
SMPD4-220ENST00000491319 PLIN4Q96Q06 1357 aa18.75■□□□□ 0.59
SMPD4-220ENST00000491319 ZMYM1Q5SVZ6 1142 aa18.74■□□□□ 0.59
SMPD4-220ENST00000491319 ZNF444Q8N0Y2 327 aaPredicted RBP18.74■□□□□ 0.59
SMPD4-220ENST00000491319 CRBNQ96SW2 442 aa18.74■□□□□ 0.59
SMPD4-220ENST00000491319 CLIP2Q9UDT6 1046 aa18.74■□□□□ 0.59
SMPD4-220ENST00000491319 MDM2Q00987 491 aaPredicted RBP18.73■□□□□ 0.59
SMPD4-220ENST00000491319 KCTD2Q14681 263 aa18.73■□□□□ 0.59
SMPD4-220ENST00000491319 FAM47AQ5JRC9 791 aa18.73■□□□□ 0.59
SMPD4-220ENST00000491319 TDHQ8IZJ6 230 aa18.73■□□□□ 0.59
SMPD4-220ENST00000491319 LRRC47Q8N1G4 583 aaKnown RBP18.73■□□□□ 0.59
SMPD4-220ENST00000491319 NACAP1Q9BZK3 213 aa18.73■□□□□ 0.59
SMPD4-220ENST00000491319 UBE2OQ9C0C9 1292 aaKnown RBP18.73■□□□□ 0.59
SMPD4-220ENST00000491319 NAPBQ9H115 298 aa18.73■□□□□ 0.59
SMPD4-220ENST00000491319 ZNF287Q9HBT7 754 aa18.73■□□□□ 0.59
SMPD4-220ENST00000491319 MTMR4Q9NYA4 1195 aa18.73■□□□□ 0.59
SMPD4-220ENST00000491319 KBTBD13C9JR72 458 aa18.72■□□□□ 0.59
SMPD4-220ENST00000491319 MYCNP04198 464 aaPredicted RBP18.72■□□□□ 0.59
SMPD4-220ENST00000491319 COPB2P35606 906 aa18.72■□□□□ 0.59
SMPD4-220ENST00000491319 RTP1P59025 263 aa18.72■□□□□ 0.59
SMPD4-220ENST00000491319 PPARAQ07869 468 aa18.72■□□□□ 0.59
SMPD4-220ENST00000491319 ZNF792Q3KQV3 632 aa18.72■□□□□ 0.59
SMPD4-220ENST00000491319 SNRNP48Q6IEG0 339 aaKnown RBP18.72■□□□□ 0.59
SMPD4-220ENST00000491319 CCDC129Q6ZRS4 1044 aa18.72■□□□□ 0.59
SMPD4-220ENST00000491319 ARRDC4Q8NCT1 418 aa18.72■□□□□ 0.59
SMPD4-220ENST00000491319 TEX13BQ9BXU2 312 aa18.72■□□□□ 0.59
SMPD4-220ENST00000491319 RIPK3Q9Y572 518 aa18.72■□□□□ 0.59
SMPD4-220ENST00000491319 FOXP2O15409 715 aa18.71■□□□□ 0.59
SMPD4-220ENST00000491319 TTLL1O95922 423 aa18.71■□□□□ 0.59
SMPD4-220ENST00000491319 TSPY3P0CV98 308 aa18.71■□□□□ 0.59
SMPD4-220ENST00000491319 TSPY8P0CW00 308 aa18.71■□□□□ 0.59
SMPD4-220ENST00000491319 PRPF38AQ8NAV1 312 aaKnown RBP18.71■□□□□ 0.59
SMPD4-220ENST00000491319 TINF2Q9BSI4 451 aa18.71■□□□□ 0.59
SMPD4-220ENST00000491319 DIS3Q9Y2L1 958 aaKnown RBP18.71■□□□□ 0.59
SMPD4-220ENST00000491319 LCTP09848 1927 aa18.7■□□□□ 0.58
SMPD4-220ENST00000491319 TAL1P17542 331 aaPredicted RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms