RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 RNF32Q9H0A6 362 aa2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 IRF2BPLQ9H1B7 796 aa2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 SLC6A17Q9H1V8 727 aa2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 FAM86C1Q9NVL1 165 aa2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 CCDC88BA6NC98 1476 aa2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 ROBO2Q9HCK4 1378 aa2.89□□□□□ -1.95
SNRNP40-207ENST00000491106 FAM221AA4D161 298 aa2.89□□□□□ -1.95
SNRNP40-207ENST00000491106 SLC22A31A6NKX4 558 aa2.89□□□□□ -1.95
SNRNP40-207ENST00000491106 ETV2O00321 342 aaPredicted RBP2.89□□□□□ -1.95
SNRNP40-207ENST00000491106 RGS13O14921 159 aa2.89□□□□□ -1.95
SNRNP40-207ENST00000491106 ARL4AP40617 200 aa2.89□□□□□ -1.95
SNRNP40-207ENST00000491106 CHRNEQ04844 493 aa2.89□□□□□ -1.95
SNRNP40-207ENST00000491106 RAD51AP2Q09MP3 1159 aa2.89□□□□□ -1.95
SNRNP40-207ENST00000491106 LRRFIP1Q32MZ4 808 aaKnown RBP2.89□□□□□ -1.95
SNRNP40-207ENST00000491106 TMEM201Q5SNT2 666 aa2.89□□□□□ -1.95
SNRNP40-207ENST00000491106 DNAJC14Q6Y2X3 702 aaPredicted RBP2.89□□□□□ -1.95
SNRNP40-207ENST00000491106 FAM196AQ6ZSG2 479 aa2.89□□□□□ -1.95
SNRNP40-207ENST00000491106 JAMLQ86YT9 394 aa2.89□□□□□ -1.95
SNRNP40-207ENST00000491106 SLFN12Q8IYM2 578 aa2.89□□□□□ -1.95
SNRNP40-207ENST00000491106 LILRA2Q8N149 483 aa2.89□□□□□ -1.95
SNRNP40-207ENST00000491106 DNAJB8Q8NHS0 232 aa2.89□□□□□ -1.95
SNRNP40-207ENST00000491106 SPON2Q9BUD6 331 aa2.89□□□□□ -1.95
SNRNP40-207ENST00000491106 ASPNQ9BXN1 380 aa2.89□□□□□ -1.95
SNRNP40-207ENST00000491106 UBP1Q9NZI7 540 aa2.89□□□□□ -1.95
SNRNP40-207ENST00000491106 TCFL5Q9UL49 500 aa2.89□□□□□ -1.95
SNRNP40-207ENST00000491106 CNOT6Q9ULM6 557 aaKnown RBP2.89□□□□□ -1.95
SNRNP40-207ENST00000491106 SHISA3A0PJX4 238 aa2.88□□□□□ -1.95
SNRNP40-207ENST00000491106 PSPNO60542 156 aa2.88□□□□□ -1.95
SNRNP40-207ENST00000491106 TP53P04637 393 aaPredicted RBP2.88□□□□□ -1.95
SNRNP40-207ENST00000491106 SDHBP21912 280 aa2.88□□□□□ -1.95
SNRNP40-207ENST00000491106 CFPP27918 469 aa2.88□□□□□ -1.95
SNRNP40-207ENST00000491106 POLR2BP30876 1174 aaKnown RBP2.88□□□□□ -1.95
SNRNP40-207ENST00000491106 RTP1P59025 263 aa2.88□□□□□ -1.95
SNRNP40-207ENST00000491106 JAG1P78504 1218 aa2.88□□□□□ -1.95
SNRNP40-207ENST00000491106 SRSF3P84103 164 aaKnown RBP2.88□□□□□ -1.95
SNRNP40-207ENST00000491106 MESP2Q0VG99 397 aa2.88□□□□□ -1.95
SNRNP40-207ENST00000491106 KCNA10Q16322 511 aa2.88□□□□□ -1.95
SNRNP40-207ENST00000491106 FBXO33Q7Z6M2 555 aa2.88□□□□□ -1.95
SNRNP40-207ENST00000491106 ADAT2Q7Z6V5 191 aaKnown RBP2.88□□□□□ -1.95
SNRNP40-207ENST00000491106 KRTAP19-1Q8IUB9 90 aa2.88□□□□□ -1.95
SNRNP40-207ENST00000491106 KIAA0825Q8IV33 1275 aa2.88□□□□□ -1.95
SNRNP40-207ENST00000491106 ANKS4BQ8N8V4 417 aa2.88□□□□□ -1.95
SNRNP40-207ENST00000491106 ENOX1Q8TC92 643 aaKnown RBP2.88□□□□□ -1.95
SNRNP40-207ENST00000491106 CPLX3Q8WVH0 158 aa2.88□□□□□ -1.95
SNRNP40-207ENST00000491106 TCTN2Q96GX1 697 aa2.88□□□□□ -1.95
SNRNP40-207ENST00000491106 DHRS1Q96LJ7 313 aa2.88□□□□□ -1.95
SNRNP40-207ENST00000491106 SGPP1Q9BX95 441 aa2.88□□□□□ -1.95
SNRNP40-207ENST00000491106 CWC22Q9HCG8 908 aaKnown RBP2.88□□□□□ -1.95
SNRNP40-207ENST00000491106 GMIPQ9P107 970 aa2.88□□□□□ -1.95
SNRNP40-207ENST00000491106 DBR1Q9UK59 544 aaKnown RBP2.88□□□□□ -1.95
SNRNP40-207ENST00000491106 SMG5Q9UPR3 1016 aaKnown RBP2.88□□□□□ -1.95
SNRNP40-207ENST00000491106 POLR3KQ9Y2Y1 108 aaPredicted RBP2.88□□□□□ -1.95
SNRNP40-207ENST00000491106 OR14I1A6ND48 311 aa2.87□□□□□ -1.95
SNRNP40-207ENST00000491106 RFXAPO00287 272 aa2.87□□□□□ -1.95
SNRNP40-207ENST00000491106 USP2O75604 605 aaPredicted RBP2.87□□□□□ -1.95
SNRNP40-207ENST00000491106 HPXP02790 462 aa2.87□□□□□ -1.95
SNRNP40-207ENST00000491106 MPOP05164 745 aa2.87□□□□□ -1.95
SNRNP40-207ENST00000491106 GSTM1P09488 218 aa2.87□□□□□ -1.95
SNRNP40-207ENST00000491106 ZGLP1P0C6A0 271 aa2.87□□□□□ -1.95
SNRNP40-207ENST00000491106 BMP7P18075 431 aa2.87□□□□□ -1.95
SNRNP40-207ENST00000491106 ZNF76P36508 570 aa2.87□□□□□ -1.95
SNRNP40-207ENST00000491106 NOP2P46087 812 aaKnown RBP2.87□□□□□ -1.95
SNRNP40-207ENST00000491106 CLCQ05315 142 aa2.87□□□□□ -1.95
SNRNP40-207ENST00000491106 SNX17Q15036 470 aa2.87□□□□□ -1.95
SNRNP40-207ENST00000491106 PPP2R5EQ16537 467 aa2.87□□□□□ -1.95
SNRNP40-207ENST00000491106 ZNF385BQ569K4 471 aa2.87□□□□□ -1.95
SNRNP40-207ENST00000491106 OLFML2BQ68BL8 750 aa2.87□□□□□ -1.95
SNRNP40-207ENST00000491106 RNF111Q6ZNA4 994 aa2.87□□□□□ -1.95
SNRNP40-207ENST00000491106 NLRC3Q7RTR2 1065 aa2.87□□□□□ -1.95
SNRNP40-207ENST00000491106 TMC3Q7Z5M5 1100 aa2.87□□□□□ -1.95
SNRNP40-207ENST00000491106 USHBP1Q8N6Y0 703 aa2.87□□□□□ -1.95
SNRNP40-207ENST00000491106 ZNF655Q8N720 491 aaPredicted RBP2.87□□□□□ -1.95
SNRNP40-207ENST00000491106 BHLHE22Q8NFJ8 381 aaPredicted RBP2.87□□□□□ -1.95
SNRNP40-207ENST00000491106 USP33Q8TEY7 942 aa2.87□□□□□ -1.95
SNRNP40-207ENST00000491106 ATG4CQ96DT6 458 aa2.87□□□□□ -1.95
SNRNP40-207ENST00000491106 PRDM14Q9GZV8 571 aa2.87□□□□□ -1.95
SNRNP40-207ENST00000491106 ZCCHC4Q9H5U6 513 aa2.87□□□□□ -1.95
SNRNP40-207ENST00000491106 CHST7Q9NS84 486 aa2.87□□□□□ -1.95
SNRNP40-207ENST00000491106 C19orf73Q9NVV2 129 aa2.87□□□□□ -1.95
SNRNP40-207ENST00000491106 PCDHB12Q9Y5F1 795 aa2.87□□□□□ -1.95
SNRNP40-207ENST00000491106 CEP162Q5TB80 1403 aa2.86□□□□□ -1.95
SNRNP40-207ENST00000491106 NUDT19A8MXV4 375 aa2.86□□□□□ -1.95
SNRNP40-207ENST00000491106 PRAMEF1O95521 474 aa2.86□□□□□ -1.95
SNRNP40-207ENST00000491106 TSPAN15O95858 294 aa2.86□□□□□ -1.95
SNRNP40-207ENST00000491106 CYP4F8P98187 520 aa2.86□□□□□ -1.95
SNRNP40-207ENST00000491106 PPP2R5DQ14738 602 aa2.86□□□□□ -1.95
SNRNP40-207ENST00000491106 RAB3GAP1Q15042 981 aa2.86□□□□□ -1.95
SNRNP40-207ENST00000491106 GAB4Q2WGN9 574 aa2.86□□□□□ -1.95
SNRNP40-207ENST00000491106 NBPF9Q3BBW0 867 aa2.86□□□□□ -1.95
SNRNP40-207ENST00000491106 FBLN7Q53RD9 439 aa2.86□□□□□ -1.95
SNRNP40-207ENST00000491106 NBPF12Q5TAG4 269 aaPredicted RBP2.86□□□□□ -1.95
SNRNP40-207ENST00000491106 OVOS1Q6IE37 1185 aa2.86□□□□□ -1.95
SNRNP40-207ENST00000491106 ZPBP2Q6X784 338 aa2.86□□□□□ -1.95
SNRNP40-207ENST00000491106 DAGLBQ8NCG7 672 aa2.86□□□□□ -1.95
SNRNP40-207ENST00000491106 SYTL5Q8TDW5 730 aaPredicted RBP2.86□□□□□ -1.95
SNRNP40-207ENST00000491106 BRF1Q92994 677 aa2.86□□□□□ -1.95
SNRNP40-207ENST00000491106 RNF34Q969K3 372 aa2.86□□□□□ -1.95
SNRNP40-207ENST00000491106 PPP1R14AQ96A00 147 aa2.86□□□□□ -1.95
SNRNP40-207ENST00000491106 INTS4Q96HW7 963 aaKnown RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 437.4 ms