RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 SH3RF1Q7Z6J0 888 aa24.93■■□□□ 1.58
CLIP2-208ENST00000491075 SIAH1Q8IUQ4 282 aa24.93■■□□□ 1.58
CLIP2-208ENST00000491075 MAFAQ8NHW3 353 aaPredicted RBP24.93■■□□□ 1.58
CLIP2-208ENST00000491075 TRIM43Q96BQ3 446 aaPredicted RBP24.93■■□□□ 1.58
CLIP2-208ENST00000491075 DYNLL2Q96FJ2 89 aa24.93■■□□□ 1.58
CLIP2-208ENST00000491075 CCDC17Q96LX7 622 aa24.93■■□□□ 1.58
CLIP2-208ENST00000491075 XPNPEP3Q9NQH7 507 aa24.93■■□□□ 1.58
CLIP2-208ENST00000491075 ATP8A2Q9NTI2 1148 aa24.93■■□□□ 1.58
CLIP2-208ENST00000491075 PHF24Q9UPV7 400 aa24.93■■□□□ 1.58
CLIP2-208ENST00000491075 TMEM132BQ14DG7 1078 aa24.92■■□□□ 1.58
CLIP2-208ENST00000491075 SAMD1Q6SPF0 538 aaPredicted RBP24.92■■□□□ 1.58
CLIP2-208ENST00000491075 MMP19Q99542 508 aa24.92■■□□□ 1.58
CLIP2-208ENST00000491075 ARMT1Q9H993 441 aa24.92■■□□□ 1.58
CLIP2-208ENST00000491075 TACC3Q9Y6A5 838 aa24.92■■□□□ 1.58
CLIP2-208ENST00000491075 TLE2Q04725 743 aa24.91■■□□□ 1.58
CLIP2-208ENST00000491075 RNF180Q86T96 592 aa24.91■■□□□ 1.58
CLIP2-208ENST00000491075 AMOTL1Q8IY63 956 aa24.91■■□□□ 1.58
CLIP2-208ENST00000491075 KIF1BPQ96EK5 621 aa24.91■■□□□ 1.58
CLIP2-208ENST00000491075 ADAMTS5Q9UNA0 930 aa24.91■■□□□ 1.58
CLIP2-208ENST00000491075 CLTBP09497 229 aa24.9■■□□□ 1.58
CLIP2-208ENST00000491075 IFIT2P09913 472 aaKnown RBP24.9■■□□□ 1.58
CLIP2-208ENST00000491075 RIOX2Q8IUF8 465 aa24.9■■□□□ 1.58
CLIP2-208ENST00000491075 DIS3Q9Y2L1 958 aaKnown RBP24.9■■□□□ 1.58
CLIP2-208ENST00000491075 TMEM265A0A087WTH1 108 aa24.89■■□□□ 1.58
CLIP2-208ENST00000491075 MBD4O95243 580 aa24.89■■□□□ 1.58
CLIP2-208ENST00000491075 KCTD2Q14681 263 aa24.89■■□□□ 1.58
CLIP2-208ENST00000491075 TINF2Q9BSI4 451 aa24.89■■□□□ 1.58
CLIP2-208ENST00000491075 TTYH1Q9H313 450 aaPredicted RBP24.89■■□□□ 1.58
CLIP2-208ENST00000491075 PRKAB2O43741 272 aa24.88■■□□□ 1.57
CLIP2-208ENST00000491075 COPB2P35606 906 aa24.88■■□□□ 1.57
CLIP2-208ENST00000491075 ADD2P35612 726 aa24.88■■□□□ 1.57
CLIP2-208ENST00000491075 CDK8P49336 464 aa24.88■■□□□ 1.57
CLIP2-208ENST00000491075 C12orf60Q5U649 245 aa24.88■■□□□ 1.57
CLIP2-208ENST00000491075 C16orf86Q6ZW13 317 aa24.88■■□□□ 1.57
CLIP2-208ENST00000491075 MYLIPQ8WY64 445 aa24.88■■□□□ 1.57
CLIP2-208ENST00000491075 RNPC3Q96LT9 517 aaKnown RBP24.88■■□□□ 1.57
CLIP2-208ENST00000491075 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.88■■□□□ 1.57
CLIP2-208ENST00000491075 GOPCQ9HD26 462 aa24.88■■□□□ 1.57
CLIP2-208ENST00000491075 PAG1Q9NWQ8 432 aa24.88■■□□□ 1.57
CLIP2-208ENST00000491075 GREB1LQ9C091 1923 aaPredicted RBP24.87■■□□□ 1.57
CLIP2-208ENST00000491075 A0A1W2PQ45 241 aaPredicted RBP24.87■■□□□ 1.57
CLIP2-208ENST00000491075 A0A1W2PQY0 241 aa24.87■■□□□ 1.57
CLIP2-208ENST00000491075 PGK1P00558 417 aa24.87■■□□□ 1.57
CLIP2-208ENST00000491075 PGK2P07205 417 aa24.87■■□□□ 1.57
CLIP2-208ENST00000491075 EEF2P13639 858 aaKnown RBP24.87■■□□□ 1.57
CLIP2-208ENST00000491075 AKR1A1P14550 325 aa24.87■■□□□ 1.57
CLIP2-208ENST00000491075 ZNF792Q3KQV3 632 aa24.87■■□□□ 1.57
CLIP2-208ENST00000491075 DDRGK1Q96HY6 314 aa24.87■■□□□ 1.57
CLIP2-208ENST00000491075 KANSL2Q9H9L4 492 aa24.87■■□□□ 1.57
CLIP2-208ENST00000491075 FBXO28Q9NVF7 368 aa24.87■■□□□ 1.57
CLIP2-208ENST00000491075 SPTBN5Q9NRC6 3674 aaKnown RBP24.86■■□□□ 1.57
CLIP2-208ENST00000491075 APBB1O00213 710 aa24.86■■□□□ 1.57
CLIP2-208ENST00000491075 VWA5AO00534 786 aa24.86■■□□□ 1.57
CLIP2-208ENST00000491075 KIAA0355O15063 1070 aa24.86■■□□□ 1.57
CLIP2-208ENST00000491075 FOSL2P15408 326 aa24.86■■□□□ 1.57
CLIP2-208ENST00000491075 RAG1P15918 1043 aa24.86■■□□□ 1.57
CLIP2-208ENST00000491075 ITGB8P26012 769 aa24.86■■□□□ 1.57
CLIP2-208ENST00000491075 ZNF214Q9UL59 606 aaPredicted RBP24.86■■□□□ 1.57
CLIP2-208ENST00000491075 PPP1R9AQ9ULJ8 1098 aa24.86■■□□□ 1.57
CLIP2-208ENST00000491075 CYP2D7A0A087X1C5 515 aa24.85■■□□□ 1.57
CLIP2-208ENST00000491075 USP17L12C9JPN9 530 aa24.85■■□□□ 1.57
CLIP2-208ENST00000491075 USP17L21D6R901 530 aa24.85■■□□□ 1.57
CLIP2-208ENST00000491075 HMMRO75330 724 aa24.85■■□□□ 1.57
CLIP2-208ENST00000491075 STAT3P40763 770 aa24.85■■□□□ 1.57
CLIP2-208ENST00000491075 PANK1Q8TE04 598 aa24.85■■□□□ 1.57
CLIP2-208ENST00000491075 CNPY2Q9Y2B0 182 aa24.85■■□□□ 1.57
CLIP2-208ENST00000491075 PQBP1O60828 265 aaKnown RBP24.84■■□□□ 1.57
CLIP2-208ENST00000491075 ZNF865P0CJ78 1059 aaPredicted RBP24.84■■□□□ 1.57
CLIP2-208ENST00000491075 TAL1P17542 331 aaPredicted RBP24.84■■□□□ 1.57
CLIP2-208ENST00000491075 TSEN34Q9BSV6 310 aaKnown RBP24.84■■□□□ 1.57
CLIP2-208ENST00000491075 SMIM22K7EJ46 135 aa24.83■■□□□ 1.57
CLIP2-208ENST00000491075 ADAMTS4O75173 837 aa24.83■■□□□ 1.57
CLIP2-208ENST00000491075 EPHB4P54760 987 aa24.83■■□□□ 1.57
CLIP2-208ENST00000491075 HNRNPUQ00839 825 aaKnown RBP eCLIP24.83■■□□□ 1.57
CLIP2-208ENST00000491075 FPGSQ05932 587 aa24.83■■□□□ 1.57
CLIP2-208ENST00000491075 SLFNL1Q499Z3 407 aa24.83■■□□□ 1.57
CLIP2-208ENST00000491075 RPAP2Q8IXW5 612 aaPredicted RBP24.83■■□□□ 1.57
CLIP2-208ENST00000491075 MSL3Q8N5Y2 521 aaKnown RBP24.83■■□□□ 1.57
CLIP2-208ENST00000491075 REPS2Q8NFH8 660 aa24.83■■□□□ 1.57
CLIP2-208ENST00000491075 TMEM39AQ9NV64 488 aa24.83■■□□□ 1.57
CLIP2-208ENST00000491075 ZBED9Q6R2W3 1325 aa24.83■■□□□ 1.56
CLIP2-208ENST00000491075 RAB11FIP3O75154 756 aa24.82■■□□□ 1.56
CLIP2-208ENST00000491075 ATP5JP18859 108 aa24.82■■□□□ 1.56
CLIP2-208ENST00000491075 FAM83BQ5T0W9 1011 aa24.82■■□□□ 1.56
CLIP2-208ENST00000491075 ANKRD33Q7Z3H0 272 aa24.82■■□□□ 1.56
CLIP2-208ENST00000491075 NUP133Q8WUM0 1156 aa24.82■■□□□ 1.56
CLIP2-208ENST00000491075 TOX2Q96NM4 488 aa24.82■■□□□ 1.56
CLIP2-208ENST00000491075 BOLA2Q9H3K6 86 aa24.82■■□□□ 1.56
CLIP2-208ENST00000491075 RAD21O60216 631 aa24.81■■□□□ 1.56
CLIP2-208ENST00000491075 ACLYP53396 1101 aa24.81■■□□□ 1.56
CLIP2-208ENST00000491075 UBE3CQ15386 1083 aa24.81■■□□□ 1.56
CLIP2-208ENST00000491075 LENG1Q96BZ8 264 aaPredicted RBP24.81■■□□□ 1.56
CLIP2-208ENST00000491075 HAUS7Q99871 368 aa24.81■■□□□ 1.56
CLIP2-208ENST00000491075 TEX13BQ9BXU2 312 aa24.81■■□□□ 1.56
CLIP2-208ENST00000491075 BCL11AQ9H165 835 aa24.81■■□□□ 1.56
CLIP2-208ENST00000491075 STARD7Q9NQZ5 370 aa24.81■■□□□ 1.56
CLIP2-208ENST00000491075 SYNGAP1Q96PV0 1343 aa24.81■■□□□ 1.56
CLIP2-208ENST00000491075 SYNRGQ9UMZ2 1314 aa24.81■■□□□ 1.56
CLIP2-208ENST00000491075 MOXD2PA6NHM9 499 aa24.8■■□□□ 1.56
CLIP2-208ENST00000491075 DCDC2CA8MYV0 355 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms