RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 CREBZFQ9NS37 354 aa21.71■■□□□ 1.07
MCF2L-230ENST00000491028 EMILIN3Q9NT22 766 aa21.71■■□□□ 1.07
MCF2L-230ENST00000491028 TMOD4Q9NZQ9 345 aa21.71■■□□□ 1.07
MCF2L-230ENST00000491028 MTMR7Q9Y216 660 aa21.71■■□□□ 1.07
MCF2L-230ENST00000491028 PALM3A6NDB9 673 aaPredicted RBP21.7■■□□□ 1.06
MCF2L-230ENST00000491028 BMP3P12645 472 aa21.7■■□□□ 1.06
MCF2L-230ENST00000491028 GNAQP50148 359 aa21.7■■□□□ 1.06
MCF2L-230ENST00000491028 ZNF157P51786 506 aaPredicted RBP21.7■■□□□ 1.06
MCF2L-230ENST00000491028 HMGCS2P54868 508 aa21.7■■□□□ 1.06
MCF2L-230ENST00000491028 SCRN1Q12765 414 aa21.7■■□□□ 1.06
MCF2L-230ENST00000491028 SNAPC2Q13487 334 aa21.7■■□□□ 1.06
MCF2L-230ENST00000491028 CCDC96Q2M329 555 aa21.7■■□□□ 1.06
MCF2L-230ENST00000491028 RASAL3Q86YV0 1011 aa21.7■■□□□ 1.06
MCF2L-230ENST00000491028 CCDC144CPQ8IYA2 1237 aa21.7■■□□□ 1.06
MCF2L-230ENST00000491028 PROCA1Q8NCQ7 364 aaPredicted RBP21.7■■□□□ 1.06
MCF2L-230ENST00000491028 MAD2L2Q9UI95 211 aa21.7■■□□□ 1.06
MCF2L-230ENST00000491028 SLC10A3P09131 477 aa21.69■■□□□ 1.06
MCF2L-230ENST00000491028 VCAM1P19320 739 aa21.69■■□□□ 1.06
MCF2L-230ENST00000491028 CCT2P78371 535 aaKnown RBP21.69■■□□□ 1.06
MCF2L-230ENST00000491028 CUL4AQ13619 759 aa21.69■■□□□ 1.06
MCF2L-230ENST00000491028 KIAA1755Q5JYT7 1200 aa21.69■■□□□ 1.06
MCF2L-230ENST00000491028 CPLX2Q6PUV4 134 aaKnown RBP21.69■■□□□ 1.06
MCF2L-230ENST00000491028 SPICE1Q8N0Z3 855 aa21.69■■□□□ 1.06
MCF2L-230ENST00000491028 LZTS2Q9BRK4 669 aa21.69■■□□□ 1.06
MCF2L-230ENST00000491028 CPLX1O14810 134 aa21.68■■□□□ 1.06
MCF2L-230ENST00000491028 CDC27P30260 824 aa21.68■■□□□ 1.06
MCF2L-230ENST00000491028 GTF2A2P52657 109 aa21.68■■□□□ 1.06
MCF2L-230ENST00000491028 TMTC3Q6ZXV5 915 aa21.68■■□□□ 1.06
MCF2L-230ENST00000491028 FASTKD5Q7L8L6 764 aaKnown RBP21.68■■□□□ 1.06
MCF2L-230ENST00000491028 RASGRP2Q7LDG7 609 aa21.68■■□□□ 1.06
MCF2L-230ENST00000491028 CCDC83Q8IWF9 413 aa21.68■■□□□ 1.06
MCF2L-230ENST00000491028 NECAB1Q8N987 351 aa21.68■■□□□ 1.06
MCF2L-230ENST00000491028 CCDC102AQ96A19 550 aa21.68■■□□□ 1.06
MCF2L-230ENST00000491028 NCOA5Q9HCD5 579 aaKnown RBP21.68■■□□□ 1.06
MCF2L-230ENST00000491028 FAM217BQ9NTX9 383 aaPredicted RBP21.68■■□□□ 1.06
MCF2L-230ENST00000491028 FRMPD2Q68DX3 1309 aaPredicted RBP21.67■■□□□ 1.06
MCF2L-230ENST00000491028 PLA2G6O60733 806 aa21.67■■□□□ 1.06
MCF2L-230ENST00000491028 CDKL5O76039 1030 aa21.67■■□□□ 1.06
MCF2L-230ENST00000491028 HSPA6P17066 643 aa21.67■■□□□ 1.06
MCF2L-230ENST00000491028 ADD1P35611 737 aaKnown RBP21.67■■□□□ 1.06
MCF2L-230ENST00000491028 ST3GAL1Q11201 340 aa21.67■■□□□ 1.06
MCF2L-230ENST00000491028 FAM83BQ5T0W9 1011 aa21.67■■□□□ 1.06
MCF2L-230ENST00000491028 PARP14Q460N5 1801 aa21.66■■□□□ 1.06
MCF2L-230ENST00000491028 KLRF2D3W0D1 207 aa21.66■■□□□ 1.06
MCF2L-230ENST00000491028 GOLGA8HP0CJ92 632 aa21.66■■□□□ 1.06
MCF2L-230ENST00000491028 CETPP11597 493 aa21.66■■□□□ 1.06
MCF2L-230ENST00000491028 SMARCA1P28370 1054 aa21.66■■□□□ 1.06
MCF2L-230ENST00000491028 KCTD1Q719H9 257 aa21.66■■□□□ 1.06
MCF2L-230ENST00000491028 STAG2Q8N3U4 1231 aa21.66■■□□□ 1.06
MCF2L-230ENST00000491028 NUP88Q99567 741 aaPredicted RBP21.66■■□□□ 1.06
MCF2L-230ENST00000491028 LLPHQ9BRT6 129 aaKnown RBP21.66■■□□□ 1.06
MCF2L-230ENST00000491028 FEM1BQ9UK73 627 aa21.66■■□□□ 1.06
MCF2L-230ENST00000491028 ISY1Q9ULR0 285 aaKnown RBP21.66■■□□□ 1.06
MCF2L-230ENST00000491028 RASSF10A6NK89 507 aa21.65■■□□□ 1.06
MCF2L-230ENST00000491028 PLEKHA8P1O95397 391 aa21.65■■□□□ 1.06
MCF2L-230ENST00000491028 IFNAR1P17181 557 aa21.65■■□□□ 1.06
MCF2L-230ENST00000491028 STAT2P52630 851 aa21.65■■□□□ 1.06
MCF2L-230ENST00000491028 DGKZQ13574 1117 aa21.65■■□□□ 1.06
MCF2L-230ENST00000491028 NTRK3Q16288 839 aa21.65■■□□□ 1.06
MCF2L-230ENST00000491028 BTNL9Q6UXG8 535 aa21.65■■□□□ 1.06
MCF2L-230ENST00000491028 GADL1Q6ZQY3 521 aa21.65■■□□□ 1.06
MCF2L-230ENST00000491028 FAM160B2Q86V87 743 aa21.65■■□□□ 1.06
MCF2L-230ENST00000491028 INTS4Q96HW7 963 aaKnown RBP21.65■■□□□ 1.06
MCF2L-230ENST00000491028 MS4A4AQ96JQ5 239 aa21.65■■□□□ 1.06
MCF2L-230ENST00000491028 SPZ1Q9BXG8 430 aa21.65■■□□□ 1.06
MCF2L-230ENST00000491028 RPAP3Q9H6T3 665 aaPredicted RBP21.65■■□□□ 1.06
MCF2L-230ENST00000491028 GPCPD1Q9NPB8 672 aa21.65■■□□□ 1.06
MCF2L-230ENST00000491028 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.65■■□□□ 1.06
MCF2L-230ENST00000491028 TMEM232C9JQI7 657 aa21.64■■□□□ 1.05
MCF2L-230ENST00000491028 MOGSQ13724 837 aa21.64■■□□□ 1.05
MCF2L-230ENST00000491028 CHURC1Q8WUH1 139 aa21.64■■□□□ 1.05
MCF2L-230ENST00000491028 AGTPBP1Q9UPW5 1226 aa21.64■■□□□ 1.05
MCF2L-230ENST00000491028 CNTNAP5Q8WYK1 1306 aa21.63■■□□□ 1.05
MCF2L-230ENST00000491028 CCL15-CCL14A0A0B4J2E2 113 aa21.63■■□□□ 1.05
MCF2L-230ENST00000491028 MANSC4A6NHS7 340 aaPredicted RBP21.63■■□□□ 1.05
MCF2L-230ENST00000491028 FAM155AB1AL88 458 aaPredicted RBP21.63■■□□□ 1.05
MCF2L-230ENST00000491028 USP17L15C9J2P7 530 aa21.63■■□□□ 1.05
MCF2L-230ENST00000491028 USP17L13C9JLJ4 530 aa21.63■■□□□ 1.05
MCF2L-230ENST00000491028 USP17L11C9JVI0 530 aa21.63■■□□□ 1.05
MCF2L-230ENST00000491028 USP17L18D6R9N7 530 aa21.63■■□□□ 1.05
MCF2L-230ENST00000491028 USP17L22D6RA61 530 aa21.63■■□□□ 1.05
MCF2L-230ENST00000491028 USP17L17D6RBQ6 530 aa21.63■■□□□ 1.05
MCF2L-230ENST00000491028 USP17L19D6RCP7 530 aa21.63■■□□□ 1.05
MCF2L-230ENST00000491028 USP17L20D6RJB6 530 aa21.63■■□□□ 1.05
MCF2L-230ENST00000491028 USP17L24Q0WX57 530 aa21.63■■□□□ 1.05
MCF2L-230ENST00000491028 FUT2Q10981 343 aa21.63■■□□□ 1.05
MCF2L-230ENST00000491028 IKQ13123 557 aaPredicted RBP21.63■■□□□ 1.05
MCF2L-230ENST00000491028 PABPC4Q13310 644 aaKnown RBP eCLIP21.63■■□□□ 1.05
MCF2L-230ENST00000491028 CCL15Q16663 113 aa21.63■■□□□ 1.05
MCF2L-230ENST00000491028 DEFB115Q30KQ5 88 aa21.63■■□□□ 1.05
MCF2L-230ENST00000491028 IFFO2Q5TF58 517 aa21.63■■□□□ 1.05
MCF2L-230ENST00000491028 SRBD1Q8N5C6 995 aaKnown RBP21.63■■□□□ 1.05
MCF2L-230ENST00000491028 NSUN7Q8NE18 718 aaKnown RBP21.63■■□□□ 1.05
MCF2L-230ENST00000491028 TANGO6Q9C0B7 1094 aa21.63■■□□□ 1.05
MCF2L-230ENST00000491028 MYH6P13533 1939 aa21.63■■□□□ 1.05
MCF2L-230ENST00000491028 MYPNQ86TC9 1320 aa21.62■■□□□ 1.05
MCF2L-230ENST00000491028 STK36Q9NRP7 1315 aa21.62■■□□□ 1.05
MCF2L-230ENST00000491028 TESPA1A2RU30 521 aaPredicted RBP21.62■■□□□ 1.05
MCF2L-230ENST00000491028 HOXA7P31268 230 aaPredicted RBP21.62■■□□□ 1.05
MCF2L-230ENST00000491028 MKRN3Q13064 507 aaKnown RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms