RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 LZTS2Q9BRK4 669 aa12.76□□□□□ -0.37
VARS2-210ENST00000490699 VCPKMTQ9H867 229 aa12.76□□□□□ -0.37
VARS2-210ENST00000490699 CREBZFQ9NS37 354 aa12.76□□□□□ -0.37
VARS2-210ENST00000490699 CTDP1Q9Y5B0 961 aaPredicted RBP12.76□□□□□ -0.37
VARS2-210ENST00000490699 F5H6K3 240 aa12.75□□□□□ -0.37
VARS2-210ENST00000490699 WDR46O15213 610 aaKnown RBP12.75□□□□□ -0.37
VARS2-210ENST00000490699 CETPP11597 493 aa12.75□□□□□ -0.37
VARS2-210ENST00000490699 ECE1P42892 770 aa12.75□□□□□ -0.37
VARS2-210ENST00000490699 NOVP48745 357 aa12.75□□□□□ -0.37
VARS2-210ENST00000490699 JAG1P78504 1218 aa12.75□□□□□ -0.37
VARS2-210ENST00000490699 AKAP17AQ02040 695 aaKnown RBP12.75□□□□□ -0.37
VARS2-210ENST00000490699 KLRC3Q07444 240 aa12.75□□□□□ -0.37
VARS2-210ENST00000490699 STK3Q13188 491 aa12.75□□□□□ -0.37
VARS2-210ENST00000490699 SHROOM1Q2M3G4 852 aaPredicted RBP12.75□□□□□ -0.37
VARS2-210ENST00000490699 GADL1Q6ZQY3 521 aa12.75□□□□□ -0.37
VARS2-210ENST00000490699 ZNF579Q8NAF0 562 aaKnown RBP12.75□□□□□ -0.37
VARS2-210ENST00000490699 GMCL1Q96IK5 515 aa12.75□□□□□ -0.37
VARS2-210ENST00000490699 WNK4Q96J92 1243 aa12.75□□□□□ -0.37
VARS2-210ENST00000490699 KIF3AQ9Y496 699 aa12.75□□□□□ -0.37
VARS2-210ENST00000490699 AFG3L2Q9Y4W6 797 aa12.75□□□□□ -0.37
VARS2-210ENST00000490699 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.75□□□□□ -0.37
VARS2-210ENST00000490699 POTEB2H3BUK9 544 aa12.74□□□□□ -0.37
VARS2-210ENST00000490699 BMP3P12645 472 aa12.74□□□□□ -0.37
VARS2-210ENST00000490699 PDIA3P30101 505 aaKnown RBP12.74□□□□□ -0.37
VARS2-210ENST00000490699 HMGCS2P54868 508 aa12.74□□□□□ -0.37
VARS2-210ENST00000490699 EVCP57679 992 aa12.74□□□□□ -0.37
VARS2-210ENST00000490699 CCDC84Q86UT8 332 aaPredicted RBP12.74□□□□□ -0.37
VARS2-210ENST00000490699 TRIM22Q8IYM9 498 aa12.74□□□□□ -0.37
VARS2-210ENST00000490699 FANCBQ8NB91 859 aa12.74□□□□□ -0.37
VARS2-210ENST00000490699 PROCA1Q8NCQ7 364 aaPredicted RBP12.74□□□□□ -0.37
VARS2-210ENST00000490699 ACER1Q8TDN7 264 aa12.74□□□□□ -0.37
VARS2-210ENST00000490699 CHURC1Q8WUH1 139 aa12.74□□□□□ -0.37
VARS2-210ENST00000490699 TANGO6Q9C0B7 1094 aa12.74□□□□□ -0.37
VARS2-210ENST00000490699 GPHNQ9NQX3 736 aaPredicted RBP12.74□□□□□ -0.37
VARS2-210ENST00000490699 TSHZ2Q9NRE2 1034 aa12.74□□□□□ -0.37
VARS2-210ENST00000490699 PCDH10Q9P2E7 1040 aa12.74□□□□□ -0.37
VARS2-210ENST00000490699 RBM27Q9P2N5 1060 aaKnown RBP12.74□□□□□ -0.37
VARS2-210ENST00000490699 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.74□□□□□ -0.37
VARS2-210ENST00000490699 TPCN1Q9ULQ1 816 aa12.74□□□□□ -0.37
VARS2-210ENST00000490699 MANSC4A6NHS7 340 aaPredicted RBP12.73□□□□□ -0.37
VARS2-210ENST00000490699 IRF6O14896 467 aa12.73□□□□□ -0.37
VARS2-210ENST00000490699 PFKFB2O60825 505 aa12.73□□□□□ -0.37
VARS2-210ENST00000490699 NDUFB10O96000 172 aa12.73□□□□□ -0.37
VARS2-210ENST00000490699 PDHBP11177 359 aa12.73□□□□□ -0.37
VARS2-210ENST00000490699 STAT2P52630 851 aa12.73□□□□□ -0.37
VARS2-210ENST00000490699 CCT2P78371 535 aaKnown RBP12.73□□□□□ -0.37
VARS2-210ENST00000490699 SREBF2Q12772 1141 aa12.73□□□□□ -0.37
VARS2-210ENST00000490699 GRM4Q14833 912 aa12.73□□□□□ -0.37
VARS2-210ENST00000490699 SPRYD7Q5W111 196 aa12.73□□□□□ -0.37
VARS2-210ENST00000490699 OTUD7BQ6GQQ9 843 aa12.73□□□□□ -0.37
VARS2-210ENST00000490699 FAM160B2Q86V87 743 aa12.73□□□□□ -0.37
VARS2-210ENST00000490699 CCDC144CPQ8IYA2 1237 aa12.73□□□□□ -0.37
VARS2-210ENST00000490699 SPICE1Q8N0Z3 855 aa12.73□□□□□ -0.37
VARS2-210ENST00000490699 NKX2-3Q8TAU0 364 aa12.73□□□□□ -0.37
VARS2-210ENST00000490699 C12orf42Q96LP6 360 aa12.73□□□□□ -0.37
VARS2-210ENST00000490699 LARP6Q9BRS8 491 aaKnown RBP12.73□□□□□ -0.37
VARS2-210ENST00000490699 MYL10Q9BUA6 226 aa12.73□□□□□ -0.37
VARS2-210ENST00000490699 SEC63Q9UGP8 760 aaKnown RBP12.73□□□□□ -0.37
VARS2-210ENST00000490699 FEM1BQ9UK73 627 aa12.73□□□□□ -0.37
VARS2-210ENST00000490699 PNMA3Q9UL41 463 aa12.73□□□□□ -0.37
VARS2-210ENST00000490699 BRPF3Q9ULD4 1205 aa12.73□□□□□ -0.37
VARS2-210ENST00000490699 KCNH4Q9UQ05 1017 aa12.73□□□□□ -0.37
VARS2-210ENST00000490699 RBM19Q9Y4C8 960 aaKnown RBP12.73□□□□□ -0.37
VARS2-210ENST00000490699 A0A0G2JLL6 359 aaPredicted RBP12.72□□□□□ -0.37
VARS2-210ENST00000490699 A0A1W2PRG0 241 aa12.72□□□□□ -0.37
VARS2-210ENST00000490699 KLRF2D3W0D1 207 aa12.72□□□□□ -0.37
VARS2-210ENST00000490699 VCAM1P19320 739 aa12.72□□□□□ -0.37
VARS2-210ENST00000490699 RXRAP19793 462 aa12.72□□□□□ -0.37
VARS2-210ENST00000490699 OSBPP22059 807 aa12.72□□□□□ -0.37
VARS2-210ENST00000490699 INHBEP58166 350 aa12.72□□□□□ -0.37
VARS2-210ENST00000490699 IRX3P78415 501 aaPredicted RBP12.72□□□□□ -0.37
VARS2-210ENST00000490699 ZNF543Q08ER8 600 aa12.72□□□□□ -0.37
VARS2-210ENST00000490699 TROAPQ12815 778 aa12.72□□□□□ -0.37
VARS2-210ENST00000490699 TRAF1Q13077 416 aa12.72□□□□□ -0.37
VARS2-210ENST00000490699 GRM1Q13255 1194 aa12.72□□□□□ -0.37
VARS2-210ENST00000490699 DEFB115Q30KQ5 88 aa12.72□□□□□ -0.37
VARS2-210ENST00000490699 SH3D19Q5HYK7 790 aa12.72□□□□□ -0.37
VARS2-210ENST00000490699 PRRT2Q7Z6L0 340 aaPredicted RBP12.72□□□□□ -0.37
VARS2-210ENST00000490699 RAB11FIP4Q86YS3 637 aa12.72□□□□□ -0.37
VARS2-210ENST00000490699 RASAL3Q86YV0 1011 aa12.72□□□□□ -0.37
VARS2-210ENST00000490699 GTF3C6Q969F1 213 aa12.72□□□□□ -0.37
VARS2-210ENST00000490699 TMX3Q96JJ7 454 aa12.72□□□□□ -0.37
VARS2-210ENST00000490699 SENP2Q9HC62 589 aa12.72□□□□□ -0.37
VARS2-210ENST00000490699 GPCPD1Q9NPB8 672 aa12.72□□□□□ -0.37
VARS2-210ENST00000490699 PHIPQ8WWQ0 1821 aa12.72□□□□□ -0.37
VARS2-210ENST00000490699 NID2Q14112 1375 aa12.71□□□□□ -0.37
VARS2-210ENST00000490699 FRMPD2Q68DX3 1309 aaPredicted RBP12.71□□□□□ -0.37
VARS2-210ENST00000490699 CCL15-CCL14A0A0B4J2E2 113 aa12.71□□□□□ -0.37
VARS2-210ENST00000490699 USP17L15C9J2P7 530 aa12.71□□□□□ -0.37
VARS2-210ENST00000490699 USP17L13C9JLJ4 530 aa12.71□□□□□ -0.37
VARS2-210ENST00000490699 TMEM232C9JQI7 657 aa12.71□□□□□ -0.37
VARS2-210ENST00000490699 USP17L11C9JVI0 530 aa12.71□□□□□ -0.37
VARS2-210ENST00000490699 USP17L18D6R9N7 530 aa12.71□□□□□ -0.37
VARS2-210ENST00000490699 USP17L22D6RA61 530 aa12.71□□□□□ -0.37
VARS2-210ENST00000490699 USP17L17D6RBQ6 530 aa12.71□□□□□ -0.37
VARS2-210ENST00000490699 USP17L19D6RCP7 530 aa12.71□□□□□ -0.37
VARS2-210ENST00000490699 USP17L20D6RJB6 530 aa12.71□□□□□ -0.37
VARS2-210ENST00000490699 SLC10A3P09131 477 aa12.71□□□□□ -0.37
VARS2-210ENST00000490699 SNHG28P0DPA3 235 aa12.71□□□□□ -0.37
VARS2-210ENST00000490699 HMGN5P82970 282 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms