RNA–Protein interactions for RNA: ENST00000490692.1

PCSK9-202, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

TSL 2

Gene PCSK9, Length 3,891 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-202ENST00000490692 SPDL1Q96EA4 605 aa12.82□□□□□ -0.36
PCSK9-202ENST00000490692 HAUS7Q99871 368 aa12.82□□□□□ -0.36
PCSK9-202ENST00000490692 PAIP2Q9BPZ3 127 aaKnown RBP12.82□□□□□ -0.36
PCSK9-202ENST00000490692 NOC4LQ9BVI4 516 aaKnown RBP12.82□□□□□ -0.36
PCSK9-202ENST00000490692 PPP1R12CQ9BZL4 782 aa12.82□□□□□ -0.36
PCSK9-202ENST00000490692 LRP2BPQ9P2M1 347 aa12.82□□□□□ -0.36
PCSK9-202ENST00000490692 PCDHB6Q9Y5E3 794 aa12.82□□□□□ -0.36
PCSK9-202ENST00000490692 HOXC9P31274 260 aa12.82□□□□□ -0.36
PCSK9-202ENST00000490692 KRT31Q15323 416 aa12.82□□□□□ -0.36
PCSK9-202ENST00000490692 EPHA10Q5JZY3 1008 aa12.82□□□□□ -0.36
PCSK9-202ENST00000490692 SMCR8Q8TEV9 937 aaPredicted RBP12.82□□□□□ -0.36
PCSK9-202ENST00000490692 CTNNA1P35221 906 aaKnown RBP12.81□□□□□ -0.36
PCSK9-202ENST00000490692 ASIC1P78348 528 aa12.81□□□□□ -0.36
PCSK9-202ENST00000490692 CTDSPL2Q05D32 466 aa12.81□□□□□ -0.36
PCSK9-202ENST00000490692 DDX21Q9NR30 783 aaKnown RBP eCLIP12.81□□□□□ -0.363e-6■■■□□ 18.6
PCSK9-202ENST00000490692 ABHD10Q9NUJ1 306 aa12.81□□□□□ -0.36
PCSK9-202ENST00000490692 IQSEC3Q9UPP2 1182 aaPredicted RBP12.81□□□□□ -0.36
PCSK9-202ENST00000490692 CDK12Q9NYV4 1490 aaPredicted RBP12.81□□□□□ -0.36
PCSK9-202ENST00000490692 M0R2C6 588 aa12.81□□□□□ -0.36
PCSK9-202ENST00000490692 PPP6R2O75170 966 aa12.81□□□□□ -0.36
PCSK9-202ENST00000490692 PRDM1O75626 825 aa12.81□□□□□ -0.36
PCSK9-202ENST00000490692 HEXIM1O94992 359 aaKnown RBP12.81□□□□□ -0.36
PCSK9-202ENST00000490692 PCK1P35558 622 aa12.81□□□□□ -0.36
PCSK9-202ENST00000490692 APBA1Q02410 837 aa12.81□□□□□ -0.36
PCSK9-202ENST00000490692 TRIM14Q14142 442 aa12.81□□□□□ -0.36
PCSK9-202ENST00000490692 NBPF6Q5VWK0 638 aa12.81□□□□□ -0.36
PCSK9-202ENST00000490692 USP49Q70CQ1 688 aa12.81□□□□□ -0.36
PCSK9-202ENST00000490692 RRP36Q96EU6 259 aaKnown RBP12.81□□□□□ -0.36
PCSK9-202ENST00000490692 NBPF4Q96M43 638 aa12.81□□□□□ -0.36
PCSK9-202ENST00000490692 YIPF3Q9GZM5 350 aa12.81□□□□□ -0.36
PCSK9-202ENST00000490692 RMND1Q9NWS8 449 aa12.81□□□□□ -0.36
PCSK9-202ENST00000490692 IRAK4Q9NWZ3 460 aa12.81□□□□□ -0.36
PCSK9-202ENST00000490692 SAMD15Q9P1V8 674 aa12.81□□□□□ -0.36
PCSK9-202ENST00000490692 LRWD1Q9UFC0 647 aa12.81□□□□□ -0.36
PCSK9-202ENST00000490692 DLC1Q96QB1 1528 aa12.81□□□□□ -0.36
PCSK9-202ENST00000490692 CABP4P57796 275 aa12.81□□□□□ -0.36
PCSK9-202ENST00000490692 PI16Q6UXB8 463 aa12.81□□□□□ -0.36
PCSK9-202ENST00000490692 KRT12Q99456 494 aa12.81□□□□□ -0.36
PCSK9-202ENST00000490692 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.81□□□□□ -0.36
PCSK9-202ENST00000490692 MOCS3O95396 460 aa12.8□□□□□ -0.36
PCSK9-202ENST00000490692 IL15P40933 162 aaPredicted RBP12.8□□□□□ -0.36
PCSK9-202ENST00000490692 ZAP70P43403 619 aa12.8□□□□□ -0.36
PCSK9-202ENST00000490692 IFNAR2P48551 515 aa12.8□□□□□ -0.36
PCSK9-202ENST00000490692 LDHAL6AQ6ZMR3 332 aa12.8□□□□□ -0.36
PCSK9-202ENST00000490692 CCDC50Q8IVM0 306 aa12.8□□□□□ -0.36
PCSK9-202ENST00000490692 SYMPKQ92797 1274 aaKnown RBP12.8□□□□□ -0.36
PCSK9-202ENST00000490692 OSBP2Q969R2 916 aa12.8□□□□□ -0.36
PCSK9-202ENST00000490692 LRRC1Q9BTT6 524 aa12.8□□□□□ -0.36
PCSK9-202ENST00000490692 NLRC4Q9NPP4 1024 aa12.8□□□□□ -0.36
PCSK9-202ENST00000490692 HAUS2Q9NVX0 235 aa12.8□□□□□ -0.36
PCSK9-202ENST00000490692 CDHR2Q9BYE9 1310 aa12.8□□□□□ -0.36
PCSK9-202ENST00000490692 B4DLN1 442 aa12.8□□□□□ -0.36
PCSK9-202ENST00000490692 EPHB4P54760 987 aa12.8□□□□□ -0.36
PCSK9-202ENST00000490692 FAM133BQ5BKY9 247 aaKnown RBP12.8□□□□□ -0.36
PCSK9-202ENST00000490692 GKAP1Q5VSY0 366 aaPredicted RBP12.8□□□□□ -0.36
PCSK9-202ENST00000490692 RESP18Q5W5W9 173 aa12.8□□□□□ -0.36
PCSK9-202ENST00000490692 TBC1D1Q86TI0 1168 aaPredicted RBP12.8□□□□□ -0.36
PCSK9-202ENST00000490692 HELBQ8NG08 1087 aaPredicted RBP12.8□□□□□ -0.36
PCSK9-202ENST00000490692 A6NNZ2 444 aa12.8□□□□□ -0.36
PCSK9-202ENST00000490692 ABL1P00519 1130 aa12.8□□□□□ -0.36
PCSK9-202ENST00000490692 GPTP24298 496 aa12.8□□□□□ -0.36
PCSK9-202ENST00000490692 ERCC5P28715 1186 aaPredicted RBP12.8□□□□□ -0.36
PCSK9-202ENST00000490692 KIF5BP33176 963 aa12.8□□□□□ -0.36
PCSK9-202ENST00000490692 GRIN1Q05586 938 aa12.8□□□□□ -0.36
PCSK9-202ENST00000490692 TUBB8Q3ZCM7 444 aa12.8□□□□□ -0.36
PCSK9-202ENST00000490692 ARMCX6Q7L4S7 300 aa12.8□□□□□ -0.36
PCSK9-202ENST00000490692 MSANTD4Q8NCY6 345 aa12.8□□□□□ -0.36
PCSK9-202ENST00000490692 MGARPQ8TDB4 240 aa12.8□□□□□ -0.36
PCSK9-202ENST00000490692 ARL8AQ96BM9 186 aa12.8□□□□□ -0.36
PCSK9-202ENST00000490692 FAM167BQ9BTA0 163 aa12.8□□□□□ -0.36
PCSK9-202ENST00000490692 EXOC1Q9NV70 894 aa12.8□□□□□ -0.36
PCSK9-202ENST00000490692 MYO1AQ9UBC5 1043 aa12.8□□□□□ -0.36
PCSK9-202ENST00000490692 NUTM2BA6NNL0 878 aaPredicted RBP12.79□□□□□ -0.36
PCSK9-202ENST00000490692 NEURL1BA8MQ27 555 aa12.79□□□□□ -0.36
PCSK9-202ENST00000490692 NUTM2EB1AL46 878 aaPredicted RBP12.79□□□□□ -0.36
PCSK9-202ENST00000490692 IFIT5Q13325 482 aaKnown RBP12.79□□□□□ -0.36
PCSK9-202ENST00000490692 UBE4AQ14139 1066 aa12.79□□□□□ -0.36
PCSK9-202ENST00000490692 SPTY2D1Q68D10 685 aaPredicted RBP12.79□□□□□ -0.36
PCSK9-202ENST00000490692 SUGP1Q8IWZ8 645 aaKnown RBP12.79□□□□□ -0.36
PCSK9-202ENST00000490692 CCDC194A0A1B0GVG4 234 aa12.79□□□□□ -0.36
PCSK9-202ENST00000490692 CEP104O60308 925 aa12.79□□□□□ -0.36
PCSK9-202ENST00000490692 KRT18P05783 430 aaKnown RBP12.79□□□□□ -0.36
PCSK9-202ENST00000490692 ZFYP08048 801 aaPredicted RBP12.79□□□□□ -0.36
PCSK9-202ENST00000490692 SLC8A1P32418 973 aa12.79□□□□□ -0.36
PCSK9-202ENST00000490692 CFAP221Q4G0U5 840 aa12.79□□□□□ -0.36
PCSK9-202ENST00000490692 RRAGAQ7L523 313 aa12.79□□□□□ -0.36
PCSK9-202ENST00000490692 MIGA1Q8NAN2 632 aa12.79□□□□□ -0.36
PCSK9-202ENST00000490692 KAT2BQ92831 832 aa12.79□□□□□ -0.36
PCSK9-202ENST00000490692 V9GY48 417 aaPredicted RBP12.79□□□□□ -0.36
PCSK9-202ENST00000490692 KIF20BQ96Q89 1820 aa12.79□□□□□ -0.36
PCSK9-202ENST00000490692 NCK2O43639 380 aa12.79□□□□□ -0.36
PCSK9-202ENST00000490692 LRRC24Q50LG9 513 aa12.79□□□□□ -0.36
PCSK9-202ENST00000490692 CCDC25Q86WR0 208 aa12.79□□□□□ -0.36
PCSK9-202ENST00000490692 CCDC63Q8NA47 563 aa12.79□□□□□ -0.36
PCSK9-202ENST00000490692 EHD2Q9NZN4 543 aa12.79□□□□□ -0.36
PCSK9-202ENST00000490692 TUBE1Q9UJT0 475 aa12.79□□□□□ -0.36
PCSK9-202ENST00000490692 NEFHP12036 1026 aa12.78□□□□□ -0.36
PCSK9-202ENST00000490692 TNNC1P63316 161 aa12.78□□□□□ -0.36
PCSK9-202ENST00000490692 EZH2Q15910 746 aaKnown RBP12.78□□□□□ -0.36
PCSK9-202ENST00000490692 APOA5Q6Q788 366 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms