RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 PLA2G6O60733 806 aa15.4■□□□□ 0.06
SNX12-205ENST00000490561 IFNAR1P17181 557 aa15.4■□□□□ 0.06
SNX12-205ENST00000490561 TMTC3Q6ZXV5 915 aa15.4■□□□□ 0.06
SNX12-205ENST00000490561 NECAB1Q8N987 351 aa15.4■□□□□ 0.06
SNX12-205ENST00000490561 OTUD5Q96G74 571 aa15.4■□□□□ 0.06
SNX12-205ENST00000490561 HHIPL1Q96JK4 782 aa15.4■□□□□ 0.06
SNX12-205ENST00000490561 MAD2L2Q9UI95 211 aa15.4■□□□□ 0.06
SNX12-205ENST00000490561 TLL2Q9Y6L7 1015 aa15.4■□□□□ 0.06
SNX12-205ENST00000490561 A0A0G2JLL6 359 aaPredicted RBP15.39■□□□□ 0.05
SNX12-205ENST00000490561 RXRAP19793 462 aa15.39■□□□□ 0.05
SNX12-205ENST00000490561 AKAP17AQ02040 695 aaKnown RBP15.39■□□□□ 0.05
SNX12-205ENST00000490561 SNAPC2Q13487 334 aa15.39■□□□□ 0.05
SNX12-205ENST00000490561 FASTKD5Q7L8L6 764 aaKnown RBP15.39■□□□□ 0.05
SNX12-205ENST00000490561 PRRT2Q7Z6L0 340 aaPredicted RBP15.39■□□□□ 0.05
SNX12-205ENST00000490561 SAPCD2Q86UD0 394 aa15.39■□□□□ 0.05
SNX12-205ENST00000490561 CCDC84Q86UT8 332 aaPredicted RBP15.39■□□□□ 0.05
SNX12-205ENST00000490561 FAM160B2Q86V87 743 aa15.39■□□□□ 0.05
SNX12-205ENST00000490561 RAB11FIP4Q86YS3 637 aa15.39■□□□□ 0.05
SNX12-205ENST00000490561 CCDC144CPQ8IYA2 1237 aa15.39■□□□□ 0.05
SNX12-205ENST00000490561 TRIM22Q8IYM9 498 aa15.39■□□□□ 0.05
SNX12-205ENST00000490561 PROCA1Q8NCQ7 364 aaPredicted RBP15.39■□□□□ 0.05
SNX12-205ENST00000490561 CHURC1Q8WUH1 139 aa15.39■□□□□ 0.05
SNX12-205ENST00000490561 WNK4Q96J92 1243 aa15.39■□□□□ 0.05
SNX12-205ENST00000490561 SPZ1Q9BXG8 430 aa15.39■□□□□ 0.05
SNX12-205ENST00000490561 FAM217BQ9NTX9 383 aaPredicted RBP15.39■□□□□ 0.05
SNX12-205ENST00000490561 FEM1BQ9UK73 627 aa15.39■□□□□ 0.05
SNX12-205ENST00000490561 SMC3Q9UQE7 1217 aa15.39■□□□□ 0.05
SNX12-205ENST00000490561 MTMR7Q9Y216 660 aa15.39■□□□□ 0.05
SNX12-205ENST00000490561 STK36Q9NRP7 1315 aa15.39■□□□□ 0.05
SNX12-205ENST00000490561 PHIPQ8WWQ0 1821 aa15.38■□□□□ 0.05
SNX12-205ENST00000490561 KLRF2D3W0D1 207 aa15.38■□□□□ 0.05
SNX12-205ENST00000490561 CDC27P30260 824 aa15.38■□□□□ 0.05
SNX12-205ENST00000490561 ADD1P35611 737 aaKnown RBP15.38■□□□□ 0.05
SNX12-205ENST00000490561 GTF2A2P52657 109 aa15.38■□□□□ 0.05
SNX12-205ENST00000490561 PABPC4Q13310 644 aaKnown RBP eCLIP15.38■□□□□ 0.056e-11■■■□□ 18.3
SNX12-205ENST00000490561 ZYXQ15942 572 aaKnown RBP15.38■□□□□ 0.05
SNX12-205ENST00000490561 WASF1Q92558 559 aa15.38■□□□□ 0.05
SNX12-205ENST00000490561 RNF26Q9BY78 433 aaPredicted RBP15.38■□□□□ 0.05
SNX12-205ENST00000490561 NCOA5Q9HCD5 579 aaKnown RBP15.38■□□□□ 0.05
SNX12-205ENST00000490561 CWC22Q9HCG8 908 aaKnown RBP15.38■□□□□ 0.05
SNX12-205ENST00000490561 EMILIN3Q9NT22 766 aa15.38■□□□□ 0.05
SNX12-205ENST00000490561 ISY1Q9ULR0 285 aaKnown RBP15.38■□□□□ 0.05
SNX12-205ENST00000490561 IRF6O14896 467 aa15.37■□□□□ 0.05
SNX12-205ENST00000490561 CETPP11597 493 aa15.37■□□□□ 0.05
SNX12-205ENST00000490561 PDIA4P13667 645 aaKnown RBP15.37■□□□□ 0.05
SNX12-205ENST00000490561 VCAM1P19320 739 aa15.37■□□□□ 0.05
SNX12-205ENST00000490561 STAT2P52630 851 aa15.37■□□□□ 0.05
SNX12-205ENST00000490561 HMGCS2P54868 508 aa15.37■□□□□ 0.05
SNX12-205ENST00000490561 SSRP1Q08945 709 aaKnown RBP15.37■□□□□ 0.05
SNX12-205ENST00000490561 ST3GAL1Q11201 340 aa15.37■□□□□ 0.05
SNX12-205ENST00000490561 NTRK3Q16288 839 aa15.37■□□□□ 0.05
SNX12-205ENST00000490561 SPRYD7Q5W111 196 aa15.37■□□□□ 0.05
SNX12-205ENST00000490561 RGMBQ6NW40 437 aa15.37■□□□□ 0.05
SNX12-205ENST00000490561 BTNL9Q6UXG8 535 aa15.37■□□□□ 0.05
SNX12-205ENST00000490561 NSUN7Q8NE18 718 aaKnown RBP15.37■□□□□ 0.05
SNX12-205ENST00000490561 SMARCC2Q8TAQ2 1214 aa15.37■□□□□ 0.05
SNX12-205ENST00000490561 CCDC102AQ96A19 550 aa15.37■□□□□ 0.05
SNX12-205ENST00000490561 ABT1Q9ULW3 272 aaKnown RBP15.37■□□□□ 0.05
SNX12-205ENST00000490561 PTPDC1A2A3K4 754 aa15.36■□□□□ 0.05
SNX12-205ENST00000490561 USP17L15C9J2P7 530 aa15.36■□□□□ 0.05
SNX12-205ENST00000490561 USP17L13C9JLJ4 530 aa15.36■□□□□ 0.05
SNX12-205ENST00000490561 TMEM232C9JQI7 657 aa15.36■□□□□ 0.05
SNX12-205ENST00000490561 USP17L11C9JVI0 530 aa15.36■□□□□ 0.05
SNX12-205ENST00000490561 USP17L18D6R9N7 530 aa15.36■□□□□ 0.05
SNX12-205ENST00000490561 USP17L22D6RA61 530 aa15.36■□□□□ 0.05
SNX12-205ENST00000490561 USP17L17D6RBQ6 530 aa15.36■□□□□ 0.05
SNX12-205ENST00000490561 USP17L19D6RCP7 530 aa15.36■□□□□ 0.05
SNX12-205ENST00000490561 USP17L20D6RJB6 530 aa15.36■□□□□ 0.05
SNX12-205ENST00000490561 PRPF3O43395 683 aaKnown RBP15.36■□□□□ 0.05
SNX12-205ENST00000490561 PLEKHA8P1O95397 391 aa15.36■□□□□ 0.05
SNX12-205ENST00000490561 FMNL1O95466 1100 aaPredicted RBP15.36■□□□□ 0.05
SNX12-205ENST00000490561 FDX1P10109 184 aa15.36■□□□□ 0.05
SNX12-205ENST00000490561 APLP1P51693 650 aa15.36■□□□□ 0.05
SNX12-205ENST00000490561 ZNF157P51786 506 aaPredicted RBP15.36■□□□□ 0.05
SNX12-205ENST00000490561 USP17L24Q0WX57 530 aa15.36■□□□□ 0.05
SNX12-205ENST00000490561 IKQ13123 557 aaPredicted RBP15.36■□□□□ 0.05
SNX12-205ENST00000490561 FAM83BQ5T0W9 1011 aa15.36■□□□□ 0.05
SNX12-205ENST00000490561 KCTD1Q719H9 257 aa15.36■□□□□ 0.05
SNX12-205ENST00000490561 SPICE1Q8N0Z3 855 aa15.36■□□□□ 0.05
SNX12-205ENST00000490561 STAG2Q8N3U4 1231 aa15.36■□□□□ 0.05
SNX12-205ENST00000490561 GPCPD1Q9NPB8 672 aa15.36■□□□□ 0.05
SNX12-205ENST00000490561 CREBZFQ9NS37 354 aa15.36■□□□□ 0.05
SNX12-205ENST00000490561 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.36■□□□□ 0.05
SNX12-205ENST00000490561 FRMPD2Q68DX3 1309 aaPredicted RBP15.36■□□□□ 0.05
SNX12-205ENST00000490561 DEXIO95424 95 aa15.35■□□□□ 0.05
SNX12-205ENST00000490561 GOLGA8HP0CJ92 632 aa15.35■□□□□ 0.05
SNX12-205ENST00000490561 PDCP20941 246 aa15.35■□□□□ 0.05
SNX12-205ENST00000490561 FUT2Q10981 343 aa15.35■□□□□ 0.05
SNX12-205ENST00000490561 TRAF1Q13077 416 aa15.35■□□□□ 0.05
SNX12-205ENST00000490561 SYDE2Q5VT97 1194 aa15.35■□□□□ 0.05
SNX12-205ENST00000490561 RASAL3Q86YV0 1011 aa15.35■□□□□ 0.05
SNX12-205ENST00000490561 FAM177A1Q8N128 213 aaPredicted RBP15.35■□□□□ 0.05
SNX12-205ENST00000490561 SRBD1Q8N5C6 995 aaKnown RBP15.35■□□□□ 0.05
SNX12-205ENST00000490561 FAM184AQ8NB25 1140 aa15.35■□□□□ 0.05
SNX12-205ENST00000490561 RGS22Q8NE09 1264 aa15.35■□□□□ 0.05
SNX12-205ENST00000490561 CNKSR2Q8WXI2 1034 aa15.35■□□□□ 0.05
SNX12-205ENST00000490561 RRP36Q96EU6 259 aaKnown RBP15.35■□□□□ 0.05
SNX12-205ENST00000490561 SLC26A6Q9BXS9 759 aa15.35■□□□□ 0.05
SNX12-205ENST00000490561 TANGO6Q9C0B7 1094 aa15.35■□□□□ 0.05
SNX12-205ENST00000490561 RPAP3Q9H6T3 665 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms