RNA–Protein interactions for RNA: ENST00000490444.2

PUM3-204, Transcript of pumilio RNA binding family member 3, human

TSL 5

Gene PUM3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM3-204	ENST00000490444	CPZ	Q66K79	652 aa		4.08	□□□□□ -1.76
PUM3-204	ENST00000490444	METTL16	Q86W50	562 aa	Known RBP	4.08	□□□□□ -1.76
PUM3-204	ENST00000490444	CREG2	Q8IUH2	290 aa		4.08	□□□□□ -1.76
PUM3-204	ENST00000490444	SPPL2C	Q8IUH8	684 aa		4.08	□□□□□ -1.76
PUM3-204	ENST00000490444	TMEFF1	Q8IYR6	380 aa		4.08	□□□□□ -1.76
PUM3-204	ENST00000490444	MFSD2A	Q8NA29	543 aa		4.08	□□□□□ -1.76
PUM3-204	ENST00000490444	PIWIL2	Q8TC59	973 aa	Known RBP	4.08	□□□□□ -1.76
PUM3-204	ENST00000490444	MIPEP	Q99797	713 aa		4.08	□□□□□ -1.76
PUM3-204	ENST00000490444	C1QTNF3	Q9BXJ4	246 aa		4.08	□□□□□ -1.76
PUM3-204	ENST00000490444	MRS2	Q9HD23	443 aa		4.08	□□□□□ -1.76
PUM3-204	ENST00000490444	SMPD4	Q9NXE4	827 aa		4.08	□□□□□ -1.76
PUM3-204	ENST00000490444	TTF2	Q9UNY4	1162 aa	Known RBP	4.08	□□□□□ -1.76
PUM3-204	ENST00000490444	TACR2	P21452	398 aa		4.07	□□□□□ -1.76
PUM3-204	ENST00000490444	CYP7A1	P22680	504 aa		4.07	□□□□□ -1.76
PUM3-204	ENST00000490444	KCNC1	P48547	511 aa		4.07	□□□□□ -1.76
PUM3-204	ENST00000490444	ETF1	P62495	437 aa	Known RBP	4.07	□□□□□ -1.76
PUM3-204	ENST00000490444	FANCC	Q00597	558 aa		4.07	□□□□□ -1.76
PUM3-204	ENST00000490444	TNK2	Q07912	1038 aa		4.07	□□□□□ -1.76
PUM3-204	ENST00000490444	INPP5A	Q14642	412 aa		4.07	□□□□□ -1.76
PUM3-204	ENST00000490444	CCDC85B	Q15834	202 aa	Predicted RBP	4.07	□□□□□ -1.76
PUM3-204	ENST00000490444	PCNX4	Q63HM2	1172 aa		4.07	□□□□□ -1.76
PUM3-204	ENST00000490444	LRFN4	Q6PJG9	635 aa		4.07	□□□□□ -1.76
PUM3-204	ENST00000490444	SHISA4	Q96DD7	197 aa		4.07	□□□□□ -1.76
PUM3-204	ENST00000490444	VWCE	Q96DN2	955 aa		4.07	□□□□□ -1.76
PUM3-204	ENST00000490444	PLPPR2	Q96GM1	343 aa		4.07	□□□□□ -1.76
PUM3-204	ENST00000490444	CNTD2	Q9H8S5	307 aa		4.07	□□□□□ -1.76
PUM3-204	ENST00000490444	FBRS	Q9HAH7	460 aa		4.07	□□□□□ -1.76
PUM3-204	ENST00000490444	CBX7	O95931	251 aa		4.06	□□□□□ -1.76
PUM3-204	ENST00000490444	GART	P22102	1010 aa		4.06	□□□□□ -1.76
PUM3-204	ENST00000490444	RBM25	P49756	843 aa	Known RBP	4.06	□□□□□ -1.76
PUM3-204	ENST00000490444	LIG3	P49916	1009 aa		4.06	□□□□□ -1.76
PUM3-204	ENST00000490444	RPS26	P62854	115 aa	Known RBP	4.06	□□□□□ -1.76
PUM3-204	ENST00000490444	PTPN11	Q06124	597 aa	Predicted RBP	4.06	□□□□□ -1.76
PUM3-204	ENST00000490444	SLBP	Q14493	270 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
PUM3-204	ENST00000490444	TSNAXIP1	Q2TAA8	658 aa		4.06	□□□□□ -1.76
PUM3-204	ENST00000490444	GAB4	Q2WGN9	574 aa		4.06	□□□□□ -1.76
PUM3-204	ENST00000490444	LETMD1	Q6P1Q0	360 aa		4.06	□□□□□ -1.76
PUM3-204	ENST00000490444	AGMO	Q6ZNB7	445 aa		4.06	□□□□□ -1.76
PUM3-204	ENST00000490444	HID1	Q8IV36	788 aa		4.06	□□□□□ -1.76
PUM3-204	ENST00000490444	PHC3	Q8NDX5	983 aa		4.06	□□□□□ -1.76
PUM3-204	ENST00000490444	GAL3ST3	Q96A11	431 aa		4.06	□□□□□ -1.76
PUM3-204	ENST00000490444	RHOV	Q96L33	236 aa		4.06	□□□□□ -1.76
PUM3-204	ENST00000490444	RSRP1	Q9BUV0	290 aa		4.06	□□□□□ -1.76
PUM3-204	ENST00000490444	KRTAP3-1	Q9BYR8	98 aa		4.06	□□□□□ -1.76
PUM3-204	ENST00000490444	WNT10A	Q9GZT5	417 aa		4.06	□□□□□ -1.76
PUM3-204	ENST00000490444	COPRS	Q9NQ92	184 aa		4.06	□□□□□ -1.76
PUM3-204	ENST00000490444	METTL5	Q9NRN9	209 aa	Known RBP	4.06	□□□□□ -1.76
PUM3-204	ENST00000490444	GPR160	Q9UJ42	338 aa		4.06	□□□□□ -1.76
PUM3-204	ENST00000490444	SNCAIP	Q9Y6H5	919 aa		4.06	□□□□□ -1.76
PUM3-204	ENST00000490444	TFE3	P19532	575 aa	Predicted RBP	4.05	□□□□□ -1.76
PUM3-204	ENST00000490444	LMNB1	P20700	586 aa		4.05	□□□□□ -1.76
PUM3-204	ENST00000490444	TGM1	P22735	817 aa		4.05	□□□□□ -1.76
PUM3-204	ENST00000490444	ITGAE	P38570	1179 aa		4.05	□□□□□ -1.76
PUM3-204	ENST00000490444	CAP2	P40123	477 aa		4.05	□□□□□ -1.76
PUM3-204	ENST00000490444	HDLBP	Q00341	1268 aa	Known RBP	4.05	□□□□□ -1.76
PUM3-204	ENST00000490444	NKG7	Q16617	165 aa		4.05	□□□□□ -1.76
PUM3-204	ENST00000490444	TTBK2	Q6IQ55	1244 aa		4.05	□□□□□ -1.76
PUM3-204	ENST00000490444	TMEM87A	Q8NBN3	555 aa		4.05	□□□□□ -1.76
PUM3-204	ENST00000490444	RIN3	Q8TB24	985 aa		4.05	□□□□□ -1.76
PUM3-204	ENST00000490444	XAGE3	Q8WTP9	111 aa		4.05	□□□□□ -1.76
PUM3-204	ENST00000490444	KCNQ5	Q9NR82	932 aa		4.05	□□□□□ -1.76
PUM3-204	ENST00000490444	TLR6	Q9Y2C9	796 aa		4.05	□□□□□ -1.76
PUM3-204	ENST00000490444	PCDHB5	Q9Y5E4	795 aa		4.05	□□□□□ -1.76
PUM3-204	ENST00000490444		F6X3S4	739 aa		4.04	□□□□□ -1.76
PUM3-204	ENST00000490444	SCAMP3	O14828	347 aa	Known RBP	4.04	□□□□□ -1.76
PUM3-204	ENST00000490444	ITGB3	P05106	788 aa		4.04	□□□□□ -1.76
PUM3-204	ENST00000490444	GRK4	P32298	578 aa		4.04	□□□□□ -1.76
PUM3-204	ENST00000490444	SLURP1	P55000	103 aa		4.04	□□□□□ -1.76
PUM3-204	ENST00000490444	MAP3K11	Q16584	847 aa		4.04	□□□□□ -1.76
PUM3-204	ENST00000490444	WIPI1	Q5MNZ9	446 aa	Predicted RBP	4.04	□□□□□ -1.76
PUM3-204	ENST00000490444	PRAMEF13	Q5VWM6	474 aa		4.04	□□□□□ -1.76
PUM3-204	ENST00000490444	ZFPM1	Q8IX07	1006 aa		4.04	□□□□□ -1.76
PUM3-204	ENST00000490444		Q8N1X5	172 aa		4.04	□□□□□ -1.76
PUM3-204	ENST00000490444	TTC9B	Q8N6N2	239 aa		4.04	□□□□□ -1.76
PUM3-204	ENST00000490444	ANKS4B	Q8N8V4	417 aa		4.04	□□□□□ -1.76
PUM3-204	ENST00000490444	MZB1	Q8WU39	189 aa		4.04	□□□□□ -1.76
PUM3-204	ENST00000490444	PWWP2A	Q96N64	755 aa		4.04	□□□□□ -1.76
PUM3-204	ENST00000490444	TMEM74	Q96NL1	305 aa		4.04	□□□□□ -1.76
PUM3-204	ENST00000490444	KBTBD4	Q9NVX7	518 aa		4.04	□□□□□ -1.76
PUM3-204	ENST00000490444	CST3	P01034	146 aa	Predicted RBP	4.03	□□□□□ -1.76
PUM3-204	ENST00000490444	RLBP1	P12271	317 aa		4.03	□□□□□ -1.76
PUM3-204	ENST00000490444	ZNF20	P17024	532 aa		4.03	□□□□□ -1.76
PUM3-204	ENST00000490444	TPP2	P29144	1249 aa	Predicted RBP	4.03	□□□□□ -1.76
PUM3-204	ENST00000490444	VIPR1	P32241	457 aa		4.03	□□□□□ -1.76
PUM3-204	ENST00000490444	ZNF76	P36508	570 aa		4.03	□□□□□ -1.76
PUM3-204	ENST00000490444	RACK1	P63244	317 aa	Known RBP	4.03	□□□□□ -1.76
PUM3-204	ENST00000490444	LMNB2	Q03252	620 aa		4.03	□□□□□ -1.76
PUM3-204	ENST00000490444	EGR3	Q06889	387 aa		4.03	□□□□□ -1.76
PUM3-204	ENST00000490444	RAD51AP2	Q09MP3	1159 aa		4.03	□□□□□ -1.76
PUM3-204	ENST00000490444	ADGRF1	Q5T601	910 aa		4.03	□□□□□ -1.76
PUM3-204	ENST00000490444	OLFML2B	Q68BL8	750 aa		4.03	□□□□□ -1.76
PUM3-204	ENST00000490444	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	4.03	□□□□□ -1.76
PUM3-204	ENST00000490444	CDH24	Q86UP0	819 aa		4.03	□□□□□ -1.76
PUM3-204	ENST00000490444	DUSP15	Q9H1R2	295 aa	Predicted RBP	4.03	□□□□□ -1.76
PUM3-204	ENST00000490444	TRIT1	Q9H3H1	467 aa	Known RBP	4.03	□□□□□ -1.76
PUM3-204	ENST00000490444	ADAMTS1	Q9UHI8	967 aa		4.03	□□□□□ -1.76
PUM3-204	ENST00000490444	FAM221A	A4D161	298 aa		4.02	□□□□□ -1.77
PUM3-204	ENST00000490444	GREM1	O60565	184 aa		4.02	□□□□□ -1.77
PUM3-204	ENST00000490444	PF4	P02776	101 aa		4.02	□□□□□ -1.77
PUM3-204	ENST00000490444	CDK8	P49336	464 aa		4.02	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms