RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 FTSJ3Q8IY81 847 aaKnown RBP23.82■■□□□ 1.4
UPK3B-205ENST00000490360 MMP19Q99542 508 aa23.82■■□□□ 1.4
UPK3B-205ENST00000490360 DCP1AQ9NPI6 582 aaPredicted RBP23.82■■□□□ 1.4
UPK3B-205ENST00000490360 TMEM39AQ9NV64 488 aa23.82■■□□□ 1.4
UPK3B-205ENST00000490360 ADAMTS5Q9UNA0 930 aa23.82■■□□□ 1.4
UPK3B-205ENST00000490360 DCDC2CA8MYV0 355 aa23.81■■□□□ 1.4
UPK3B-205ENST00000490360 AKR1A1P14550 325 aa23.81■■□□□ 1.4
UPK3B-205ENST00000490360 ANKRD33Q7Z3H0 272 aa23.81■■□□□ 1.4
UPK3B-205ENST00000490360 RIOX2Q8IUF8 465 aa23.81■■□□□ 1.4
UPK3B-205ENST00000490360 NUP133Q8WUM0 1156 aa23.81■■□□□ 1.4
UPK3B-205ENST00000490360 C1orf115Q9H7X2 142 aa23.81■■□□□ 1.4
UPK3B-205ENST00000490360 PARP14Q460N5 1801 aa23.81■■□□□ 1.4
UPK3B-205ENST00000490360 A0A1W2PQ45 241 aaPredicted RBP23.8■■□□□ 1.4
UPK3B-205ENST00000490360 A0A1W2PQY0 241 aa23.8■■□□□ 1.4
UPK3B-205ENST00000490360 PQBP1O60828 265 aaKnown RBP23.8■■□□□ 1.4
UPK3B-205ENST00000490360 ITGB8P26012 769 aa23.8■■□□□ 1.4
UPK3B-205ENST00000490360 TMEM132BQ14DG7 1078 aa23.8■■□□□ 1.4
UPK3B-205ENST00000490360 TJAP1Q5JTD0 557 aa23.8■■□□□ 1.4
UPK3B-205ENST00000490360 KIAA1755Q5JYT7 1200 aa23.8■■□□□ 1.4
UPK3B-205ENST00000490360 CCDC174Q6PII3 467 aa23.8■■□□□ 1.4
UPK3B-205ENST00000490360 SPICE1Q8N0Z3 855 aa23.8■■□□□ 1.4
UPK3B-205ENST00000490360 MSL3Q8N5Y2 521 aaKnown RBP23.8■■□□□ 1.4
UPK3B-205ENST00000490360 PLXNA1Q9UIW2 1896 aa23.8■■□□□ 1.4
UPK3B-205ENST00000490360 CNPY2Q9Y2B0 182 aa23.8■■□□□ 1.4
UPK3B-205ENST00000490360 PGK1P00558 417 aa23.79■■□□□ 1.4
UPK3B-205ENST00000490360 ZNF792Q3KQV3 632 aa23.79■■□□□ 1.4
UPK3B-205ENST00000490360 SIAH1Q8IUQ4 282 aa23.79■■□□□ 1.4
UPK3B-205ENST00000490360 AMOTL1Q8IY63 956 aa23.79■■□□□ 1.4
UPK3B-205ENST00000490360 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.79■■□□□ 1.4
UPK3B-205ENST00000490360 ATP8A2Q9NTI2 1148 aa23.79■■□□□ 1.4
UPK3B-205ENST00000490360 ZNF532Q9HCE3 1301 aa23.79■■□□□ 1.4
UPK3B-205ENST00000490360 MOXD2PA6NHM9 499 aa23.78■■□□□ 1.4
UPK3B-205ENST00000490360 DNAJB2P25686 324 aa23.78■■□□□ 1.4
UPK3B-205ENST00000490360 EPHB4P54760 987 aa23.78■■□□□ 1.4
UPK3B-205ENST00000490360 ITPRIPQ8IWB1 547 aa23.78■■□□□ 1.4
UPK3B-205ENST00000490360 SDR42E1Q8WUS8 393 aa23.78■■□□□ 1.4
UPK3B-205ENST00000490360 MROH7Q68CQ1 1323 aa23.78■■□□□ 1.4
UPK3B-205ENST00000490360 COL11A1P12107 1806 aaPredicted RBP23.77■■□□□ 1.4
UPK3B-205ENST00000490360 STAT3P40763 770 aa23.77■■□□□ 1.4
UPK3B-205ENST00000490360 SLC44A5Q8NCS7 719 aa23.77■■□□□ 1.4
UPK3B-205ENST00000490360 ZNF576Q9H609 170 aa23.77■■□□□ 1.4
UPK3B-205ENST00000490360 KANSL2Q9H9L4 492 aa23.77■■□□□ 1.4
UPK3B-205ENST00000490360 GOPCQ9HD26 462 aa23.77■■□□□ 1.4
UPK3B-205ENST00000490360 STARD7Q9NQZ5 370 aa23.77■■□□□ 1.4
UPK3B-205ENST00000490360 PGK2P07205 417 aa23.76■■□□□ 1.39
UPK3B-205ENST00000490360 ZNF865P0CJ78 1059 aaPredicted RBP23.76■■□□□ 1.39
UPK3B-205ENST00000490360 AKR1B1P15121 316 aa23.76■■□□□ 1.39
UPK3B-205ENST00000490360 FAAP100Q0VG06 881 aa23.76■■□□□ 1.39
UPK3B-205ENST00000490360 GRIN2CQ14957 1233 aa23.76■■□□□ 1.39
UPK3B-205ENST00000490360 DDRGK1Q96HY6 314 aa23.76■■□□□ 1.39
UPK3B-205ENST00000490360 TCRBV5S4A2TA0A5A2 114 aa23.75■■□□□ 1.39
UPK3B-205ENST00000490360 CCER2I3L3R5 266 aa23.75■■□□□ 1.39
UPK3B-205ENST00000490360 VWA5AO00534 786 aa23.75■■□□□ 1.39
UPK3B-205ENST00000490360 ADAMTS4O75173 837 aa23.75■■□□□ 1.39
UPK3B-205ENST00000490360 TIMP1P01033 207 aa23.75■■□□□ 1.39
UPK3B-205ENST00000490360 ACLYP53396 1101 aa23.75■■□□□ 1.39
UPK3B-205ENST00000490360 EVX2Q03828 476 aa23.75■■□□□ 1.39
UPK3B-205ENST00000490360 CEP85Q6P2H3 762 aa23.75■■□□□ 1.39
UPK3B-205ENST00000490360 SAMD1Q6SPF0 538 aaPredicted RBP23.75■■□□□ 1.39
UPK3B-205ENST00000490360 LCORLQ8N3X6 602 aa23.75■■□□□ 1.39
UPK3B-205ENST00000490360 TIFAQ96CG3 184 aa23.75■■□□□ 1.39
UPK3B-205ENST00000490360 FAM184BQ9ULE4 1060 aa23.75■■□□□ 1.39
UPK3B-205ENST00000490360 PPP1R9AQ9ULJ8 1098 aa23.75■■□□□ 1.39
UPK3B-205ENST00000490360 EXOC6BQ9Y2D4 811 aa23.75■■□□□ 1.39
UPK3B-205ENST00000490360 TNFRSF10AO00220 468 aa23.74■■□□□ 1.39
UPK3B-205ENST00000490360 CYP2D6P10635 497 aa23.74■■□□□ 1.39
UPK3B-205ENST00000490360 CLASRPQ8N2M8 674 aaKnown RBP23.74■■□□□ 1.39
UPK3B-205ENST00000490360 DYNLL2Q96FJ2 89 aa23.74■■□□□ 1.39
UPK3B-205ENST00000490360 ELP1O95163 1332 aa23.74■■□□□ 1.39
UPK3B-205ENST00000490360 SYNGAP1Q96PV0 1343 aa23.74■■□□□ 1.39
UPK3B-205ENST00000490360 MUC3AQ02505 3323 aa23.74■■□□□ 1.39
UPK3B-205ENST00000490360 GOLIM4O00461 696 aa23.73■■□□□ 1.39
UPK3B-205ENST00000490360 EEF2P13639 858 aaKnown RBP23.73■■□□□ 1.39
UPK3B-205ENST00000490360 TAL1P17542 331 aaPredicted RBP23.73■■□□□ 1.39
UPK3B-205ENST00000490360 CDK8P49336 464 aa23.73■■□□□ 1.39
UPK3B-205ENST00000490360 PPIGQ13427 754 aaKnown RBP eCLIP23.73■■□□□ 1.39
UPK3B-205ENST00000490360 C12orf60Q5U649 245 aa23.73■■□□□ 1.39
UPK3B-205ENST00000490360 MFSD5Q6N075 450 aa23.73■■□□□ 1.39
UPK3B-205ENST00000490360 KLHDC9Q8NEP7 349 aa23.73■■□□□ 1.39
UPK3B-205ENST00000490360 GAS2L1Q99501 681 aaPredicted RBP23.73■■□□□ 1.39
UPK3B-205ENST00000490360 ZNF214Q9UL59 606 aaPredicted RBP23.73■■□□□ 1.39
UPK3B-205ENST00000490360 DUSP11O75319 330 aaKnown RBP23.72■■□□□ 1.39
UPK3B-205ENST00000490360 MAMDC4Q6UXC1 1216 aa23.72■■□□□ 1.39
UPK3B-205ENST00000490360 C16orf86Q6ZW13 317 aa23.72■■□□□ 1.39
UPK3B-205ENST00000490360 CLEC10AQ8IUN9 316 aa23.72■■□□□ 1.39
UPK3B-205ENST00000490360 PCSK9Q8NBP7 692 aaKnown RBP23.72■■□□□ 1.39
UPK3B-205ENST00000490360 RHPN1Q8TCX5 695 aa23.72■■□□□ 1.39
UPK3B-205ENST00000490360 ATXN2LQ8WWM7 1075 aaKnown RBP23.72■■□□□ 1.39
UPK3B-205ENST00000490360 GLT1D1Q96MS3 346 aa23.72■■□□□ 1.39
UPK3B-205ENST00000490360 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.72■■□□□ 1.39
UPK3B-205ENST00000490360 TBX21Q9UL17 535 aa23.72■■□□□ 1.39
UPK3B-205ENST00000490360 BAZ2AQ9UIF9 1905 aaKnown RBP23.71■■□□□ 1.39
UPK3B-205ENST00000490360 SYNRGQ9UMZ2 1314 aa23.71■■□□□ 1.39
UPK3B-205ENST00000490360 CST5P28325 142 aaPredicted RBP23.71■■□□□ 1.39
UPK3B-205ENST00000490360 AKNAD1Q5T1N1 836 aa23.71■■□□□ 1.39
UPK3B-205ENST00000490360 ZNF467Q7Z7K2 595 aaPredicted RBP23.71■■□□□ 1.39
UPK3B-205ENST00000490360 DNAJC2Q99543 621 aaKnown RBP23.71■■□□□ 1.39
UPK3B-205ENST00000490360 TEX13BQ9BXU2 312 aa23.71■■□□□ 1.39
UPK3B-205ENST00000490360 ARMT1Q9H993 441 aa23.71■■□□□ 1.39
UPK3B-205ENST00000490360 SPC25Q9HBM1 224 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms