RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 PRKAR2AP13861 404 aaKnown RBP20.71■□□□□ 0.91
SEC13-218ENST00000490283 IRX6P78412 446 aaPredicted RBP20.71■□□□□ 0.91
SEC13-218ENST00000490283 TFAP4Q01664 338 aa20.71■□□□□ 0.91
SEC13-218ENST00000490283 KLRC3Q07444 240 aa20.71■□□□□ 0.91
SEC13-218ENST00000490283 GRB14Q14449 540 aa20.71■□□□□ 0.91
SEC13-218ENST00000490283 MFSD14CQ5VZR4 134 aa20.71■□□□□ 0.91
SEC13-218ENST00000490283 NCAPG2Q86XI2 1143 aa20.71■□□□□ 0.91
SEC13-218ENST00000490283 HTATIP2Q9BUP3 242 aa20.71■□□□□ 0.91
SEC13-218ENST00000490283 DIAPH3Q9NSV4 1193 aa20.71■□□□□ 0.91
SEC13-218ENST00000490283 SLC5A4Q9NY91 659 aa20.71■□□□□ 0.91
SEC13-218ENST00000490283 PPP1R9AQ9ULJ8 1098 aa20.71■□□□□ 0.91
SEC13-218ENST00000490283 CTDP1Q9Y5B0 961 aaPredicted RBP20.71■□□□□ 0.91
SEC13-218ENST00000490283 PLIN4Q96Q06 1357 aa20.71■□□□□ 0.91
SEC13-218ENST00000490283 DOCK3Q8IZD9 2030 aa20.7■□□□□ 0.9
SEC13-218ENST00000490283 SLC25A27O95847 323 aa20.7■□□□□ 0.9
SEC13-218ENST00000490283 NDUFB10O96000 172 aa20.7■□□□□ 0.9
SEC13-218ENST00000490283 ERCC3P19447 782 aa20.7■□□□□ 0.9
SEC13-218ENST00000490283 CTDSPL2Q05D32 466 aa20.7■□□□□ 0.9
SEC13-218ENST00000490283 TRIM32Q13049 653 aa20.7■□□□□ 0.9
SEC13-218ENST00000490283 ALX1Q15699 326 aa20.7■□□□□ 0.9
SEC13-218ENST00000490283 FAM47AQ5JRC9 791 aa20.7■□□□□ 0.9
SEC13-218ENST00000490283 VPS53Q5VIR6 699 aa20.7■□□□□ 0.9
SEC13-218ENST00000490283 DPP9Q86TI2 863 aa20.7■□□□□ 0.9
SEC13-218ENST00000490283 CCDC171Q6TFL3 1326 aa20.7■□□□□ 0.9
SEC13-218ENST00000490283 SDSP20132 328 aa20.69■□□□□ 0.9
SEC13-218ENST00000490283 COPB2P35606 906 aa20.69■□□□□ 0.9
SEC13-218ENST00000490283 MKL1Q969V6 931 aa20.69■□□□□ 0.9
SEC13-218ENST00000490283 SLF1Q9BQI6 1058 aa20.69■□□□□ 0.9
SEC13-218ENST00000490283 TOMM22Q9NS69 142 aa20.69■□□□□ 0.9
SEC13-218ENST00000490283 FBXO28Q9NVF7 368 aa20.69■□□□□ 0.9
SEC13-218ENST00000490283 ANAPC4Q9UJX5 808 aa20.69■□□□□ 0.9
SEC13-218ENST00000490283 ISY1Q9ULR0 285 aaKnown RBP20.69■□□□□ 0.9
SEC13-218ENST00000490283 VWA5AO00534 786 aa20.68■□□□□ 0.9
SEC13-218ENST00000490283 FOXP2O15409 715 aa20.68■□□□□ 0.9
SEC13-218ENST00000490283 HOXC6P09630 235 aa20.68■□□□□ 0.9
SEC13-218ENST00000490283 HSPD1P10809 573 aaKnown RBP20.68■□□□□ 0.9
SEC13-218ENST00000490283 ADORA2AP29274 412 aa20.68■□□□□ 0.9
SEC13-218ENST00000490283 CCL14Q16627 93 aa20.68■□□□□ 0.9
SEC13-218ENST00000490283 MAP3K21Q5TCX8 1036 aa20.68■□□□□ 0.9
SEC13-218ENST00000490283 LRRC47Q8N1G4 583 aaKnown RBP20.68■□□□□ 0.9
SEC13-218ENST00000490283 GMCL1P1Q8NEA9 526 aa20.68■□□□□ 0.9
SEC13-218ENST00000490283 NUP88Q99567 741 aaPredicted RBP20.68■□□□□ 0.9
SEC13-218ENST00000490283 ZMYM6O95789 1325 aa20.68■□□□□ 0.9
SEC13-218ENST00000490283 TNRC18O15417 2968 aaPredicted RBP20.67■□□□□ 0.9
SEC13-218ENST00000490283 GREB1LQ9C091 1923 aaPredicted RBP20.67■□□□□ 0.9
SEC13-218ENST00000490283 RANBP6O60518 1105 aaKnown RBP20.67■□□□□ 0.9
SEC13-218ENST00000490283 FGAP02671 866 aa20.67■□□□□ 0.9
SEC13-218ENST00000490283 FCER1AP12319 257 aa20.67■□□□□ 0.9
SEC13-218ENST00000490283 CACNB2Q08289 660 aaPredicted RBP20.67■□□□□ 0.9
SEC13-218ENST00000490283 TMEM132BQ14DG7 1078 aa20.67■□□□□ 0.9
SEC13-218ENST00000490283 ZNF589Q86UQ0 364 aaPredicted RBP20.67■□□□□ 0.9
SEC13-218ENST00000490283 ABRAQ8N0Z2 381 aa20.67■□□□□ 0.9
SEC13-218ENST00000490283 ANKLE1Q8NAG6 615 aa20.67■□□□□ 0.9
SEC13-218ENST00000490283 PRPF38AQ8NAV1 312 aaKnown RBP20.67■□□□□ 0.9
SEC13-218ENST00000490283 DPF3Q92784 378 aa20.67■□□□□ 0.9
SEC13-218ENST00000490283 CRISPLD2Q9H0B8 497 aa20.67■□□□□ 0.9
SEC13-218ENST00000490283 ADAMTS5Q9UNA0 930 aa20.67■□□□□ 0.9
SEC13-218ENST00000490283 STX8Q9UNK0 236 aa20.67■□□□□ 0.9
SEC13-218ENST00000490283 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.67■□□□□ 0.9
SEC13-218ENST00000490283 PLXNB2O15031 1838 aa20.67■□□□□ 0.9
SEC13-218ENST00000490283 STAT3P40763 770 aa20.66■□□□□ 0.9
SEC13-218ENST00000490283 SLFN13Q68D06 897 aa20.66■□□□□ 0.9
SEC13-218ENST00000490283 RIOX2Q8IUF8 465 aa20.66■□□□□ 0.9
SEC13-218ENST00000490283 FEM1BQ9UK73 627 aa20.66■□□□□ 0.9
SEC13-218ENST00000490283 A0A0G2JMZ2 1700 aa20.66■□□□□ 0.9
SEC13-218ENST00000490283 ORC4O43929 436 aa20.65■□□□□ 0.9
SEC13-218ENST00000490283 ZBED4O75132 1171 aa20.65■□□□□ 0.9
SEC13-218ENST00000490283 KCTD2Q14681 263 aa20.65■□□□□ 0.9
SEC13-218ENST00000490283 RRP12Q5JTH9 1297 aaKnown RBP20.65■□□□□ 0.9
SEC13-218ENST00000490283 CWC27Q6UX04 472 aaKnown RBP20.65■□□□□ 0.9
SEC13-218ENST00000490283 KIFC2Q96AC6 838 aa20.65■□□□□ 0.9
SEC13-218ENST00000490283 PCP11498 1178 aaKnown RBP20.64■□□□□ 0.89
SEC13-218ENST00000490283 BMP3P12645 472 aa20.64■□□□□ 0.89
SEC13-218ENST00000490283 IKQ13123 557 aaPredicted RBP20.64■□□□□ 0.89
SEC13-218ENST00000490283 NECAB2Q7Z6G3 386 aa20.64■□□□□ 0.89
SEC13-218ENST00000490283 UBE2Q1Q7Z7E8 422 aa20.64■□□□□ 0.89
SEC13-218ENST00000490283 MMP19Q99542 508 aa20.64■□□□□ 0.89
SEC13-218ENST00000490283 TEX13BQ9BXU2 312 aa20.64■□□□□ 0.89
SEC13-218ENST00000490283 SLC1A4P43007 532 aa20.63■□□□□ 0.89
SEC13-218ENST00000490283 OLFML2BQ68BL8 750 aa20.63■□□□□ 0.89
SEC13-218ENST00000490283 NPLOC4Q8TAT6 608 aa20.63■□□□□ 0.89
SEC13-218ENST00000490283 RNF41Q9H4P4 317 aaPredicted RBP20.63■□□□□ 0.89
SEC13-218ENST00000490283 FLRT1Q9NZU1 646 aa20.63■□□□□ 0.89
SEC13-218ENST00000490283 ZNF214Q9UL59 606 aaPredicted RBP20.63■□□□□ 0.89
SEC13-218ENST00000490283 BRCA2P51587 3418 aa20.62■□□□□ 0.89
SEC13-218ENST00000490283 MSCO60682 206 aa20.62■□□□□ 0.89
SEC13-218ENST00000490283 FDX1P10109 184 aa20.62■□□□□ 0.89
SEC13-218ENST00000490283 CNGA1P29973 690 aa20.62■□□□□ 0.89
SEC13-218ENST00000490283 CCND3P30281 292 aaPredicted RBP20.62■□□□□ 0.89
SEC13-218ENST00000490283 STAT2P52630 851 aa20.62■□□□□ 0.89
SEC13-218ENST00000490283 HAND2P61296 217 aa20.62■□□□□ 0.89
SEC13-218ENST00000490283 SNRNP48Q6IEG0 339 aaKnown RBP20.62■□□□□ 0.89
SEC13-218ENST00000490283 MFSD6Q6ZSS7 791 aa20.62■□□□□ 0.89
SEC13-218ENST00000490283 FAM160B2Q86V87 743 aa20.62■□□□□ 0.89
SEC13-218ENST00000490283 CHURC1Q8WUH1 139 aa20.62■□□□□ 0.89
SEC13-218ENST00000490283 GMCL1Q96IK5 515 aa20.62■□□□□ 0.89
SEC13-218ENST00000490283 PAWRQ96IZ0 340 aaKnown RBP20.62■□□□□ 0.89
SEC13-218ENST00000490283 INCENPQ9NQS7 918 aa20.62■□□□□ 0.89
SEC13-218ENST00000490283 OGDHLQ9ULD0 1010 aa20.62■□□□□ 0.89
SEC13-218ENST00000490283 NR2E3Q9Y5X4 410 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms