RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 FAM47AQ5JRC9 791 aa23.47■■□□□ 1.35
SMC4-222ENST00000490207 PRPF38BQ5VTL8 546 aaKnown RBP23.47■■□□□ 1.35
SMC4-222ENST00000490207 NEDD1Q8NHV4 660 aa23.47■■□□□ 1.35
SMC4-222ENST00000490207 MTMR4Q9NYA4 1195 aa23.47■■□□□ 1.35
SMC4-222ENST00000490207 CLIP2Q9UDT6 1046 aa23.47■■□□□ 1.35
SMC4-222ENST00000490207 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.47■■□□□ 1.35
SMC4-222ENST00000490207 SLC15A5A6NIM6 579 aa23.46■■□□□ 1.35
SMC4-222ENST00000490207 ZMYM6O95789 1325 aa23.46■■□□□ 1.35
SMC4-222ENST00000490207 TTLL1O95922 423 aa23.46■■□□□ 1.35
SMC4-222ENST00000490207 TFAP4Q01664 338 aa23.46■■□□□ 1.35
SMC4-222ENST00000490207 GRB14Q14449 540 aa23.46■■□□□ 1.35
SMC4-222ENST00000490207 PLS1Q14651 629 aa23.46■■□□□ 1.35
SMC4-222ENST00000490207 SHCBP1Q8NEM2 672 aa23.46■■□□□ 1.35
SMC4-222ENST00000490207 DEFB118Q96PH6 123 aa23.46■■□□□ 1.35
SMC4-222ENST00000490207 FBXO28Q9NVF7 368 aa23.46■■□□□ 1.35
SMC4-222ENST00000490207 ANAPC4Q9UJX5 808 aa23.46■■□□□ 1.35
SMC4-222ENST00000490207 F5H6K3 240 aa23.45■■□□□ 1.34
SMC4-222ENST00000490207 SGPL1O95470 568 aa23.45■■□□□ 1.34
SMC4-222ENST00000490207 NDUFB10O96000 172 aa23.45■■□□□ 1.34
SMC4-222ENST00000490207 MFAP1P55081 439 aaKnown RBP23.45■■□□□ 1.34
SMC4-222ENST00000490207 KLRC3Q07444 240 aa23.45■■□□□ 1.34
SMC4-222ENST00000490207 LRRC47Q8N1G4 583 aaKnown RBP23.45■■□□□ 1.34
SMC4-222ENST00000490207 NUP88Q99567 741 aaPredicted RBP23.45■■□□□ 1.34
SMC4-222ENST00000490207 PPP1R9AQ9ULJ8 1098 aa23.45■■□□□ 1.34
SMC4-222ENST00000490207 RPTORQ8N122 1335 aa23.44■■□□□ 1.34
SMC4-222ENST00000490207 HSPD1P10809 573 aaKnown RBP23.44■■□□□ 1.34
SMC4-222ENST00000490207 PRKAR2AP13861 404 aaKnown RBP23.44■■□□□ 1.34
SMC4-222ENST00000490207 ERCC3P19447 782 aa23.44■■□□□ 1.34
SMC4-222ENST00000490207 PDE4AP27815 886 aa23.44■■□□□ 1.34
SMC4-222ENST00000490207 CCL14Q16627 93 aa23.44■■□□□ 1.34
SMC4-222ENST00000490207 MKL1Q969V6 931 aa23.44■■□□□ 1.34
SMC4-222ENST00000490207 HMX1Q9NP08 348 aaPredicted RBP23.44■■□□□ 1.34
SMC4-222ENST00000490207 DIAPH3Q9NSV4 1193 aa23.44■■□□□ 1.34
SMC4-222ENST00000490207 SYNPO2Q9UMS6 1093 aa23.44■■□□□ 1.34
SMC4-222ENST00000490207 FRMPD3Q5JV73 1810 aa23.44■■□□□ 1.34
SMC4-222ENST00000490207 TSPY2A6NKD2 308 aa23.43■■□□□ 1.34
SMC4-222ENST00000490207 HIP1O00291 1037 aa23.43■■□□□ 1.34
SMC4-222ENST00000490207 FGAP02671 866 aa23.43■■□□□ 1.34
SMC4-222ENST00000490207 TMEM132BQ14DG7 1078 aa23.43■■□□□ 1.34
SMC4-222ENST00000490207 MAP3K21Q5TCX8 1036 aa23.43■■□□□ 1.34
SMC4-222ENST00000490207 SLF1Q9BQI6 1058 aa23.43■■□□□ 1.34
SMC4-222ENST00000490207 ADAMTS5Q9UNA0 930 aa23.43■■□□□ 1.34
SMC4-222ENST00000490207 FARP2O94887 1054 aaPredicted RBP23.42■■□□□ 1.34
SMC4-222ENST00000490207 CAPN2P17655 700 aa23.42■■□□□ 1.34
SMC4-222ENST00000490207 PPP4R3BQ5MIZ7 849 aa23.42■■□□□ 1.34
SMC4-222ENST00000490207 NCAPG2Q86XI2 1143 aa23.42■■□□□ 1.34
SMC4-222ENST00000490207 GMCL1P1Q8NEA9 526 aa23.42■■□□□ 1.34
SMC4-222ENST00000490207 MROH8Q9H579 483 aa23.42■■□□□ 1.34
SMC4-222ENST00000490207 INCENPQ9NQS7 918 aa23.42■■□□□ 1.34
SMC4-222ENST00000490207 TACC3Q9Y6A5 838 aa23.42■■□□□ 1.34
SMC4-222ENST00000490207 ZNFX1Q9P2E3 1918 aaKnown RBP23.41■■□□□ 1.34
SMC4-222ENST00000490207 VWA5AO00534 786 aa23.41■■□□□ 1.34
SMC4-222ENST00000490207 ORC4O43929 436 aa23.41■■□□□ 1.34
SMC4-222ENST00000490207 RANBP6O60518 1105 aaKnown RBP23.41■■□□□ 1.34
SMC4-222ENST00000490207 TFRCP02786 760 aaKnown RBP23.41■■□□□ 1.34
SMC4-222ENST00000490207 HOXC6P09630 235 aa23.41■■□□□ 1.34
SMC4-222ENST00000490207 CWC27Q6UX04 472 aaKnown RBP23.41■■□□□ 1.34
SMC4-222ENST00000490207 CRISPLD2Q9H0B8 497 aa23.41■■□□□ 1.34
SMC4-222ENST00000490207 STRNO43815 780 aa23.4■■□□□ 1.34
SMC4-222ENST00000490207 SLC25A27O95847 323 aa23.4■■□□□ 1.34
SMC4-222ENST00000490207 ADORA2AP29274 412 aa23.4■■□□□ 1.34
SMC4-222ENST00000490207 CACNB2Q08289 660 aaPredicted RBP23.4■■□□□ 1.34
SMC4-222ENST00000490207 UBE2Q1Q7Z7E8 422 aa23.4■■□□□ 1.34
SMC4-222ENST00000490207 NPLOC4Q8TAT6 608 aa23.4■■□□□ 1.34
SMC4-222ENST00000490207 TOMM22Q9NS69 142 aa23.4■■□□□ 1.34
SMC4-222ENST00000490207 STX8Q9UNK0 236 aa23.4■■□□□ 1.34
SMC4-222ENST00000490207 PLXNA1Q9UIW2 1896 aa23.4■■□□□ 1.34
SMC4-222ENST00000490207 FGRP09769 529 aa23.39■■□□□ 1.33
SMC4-222ENST00000490207 HAND2P61296 217 aa23.39■■□□□ 1.33
SMC4-222ENST00000490207 TTC22Q5TAA0 569 aa23.39■■□□□ 1.33
SMC4-222ENST00000490207 SLFN13Q68D06 897 aa23.39■■□□□ 1.33
SMC4-222ENST00000490207 DPP9Q86TI2 863 aa23.39■■□□□ 1.33
SMC4-222ENST00000490207 RIOX2Q8IUF8 465 aa23.39■■□□□ 1.33
SMC4-222ENST00000490207 REPS2Q8NFH8 660 aa23.39■■□□□ 1.33
SMC4-222ENST00000490207 FLRT1Q9NZU1 646 aa23.39■■□□□ 1.33
SMC4-222ENST00000490207 ZNF214Q9UL59 606 aaPredicted RBP23.39■■□□□ 1.33
SMC4-222ENST00000490207 NMT2O60551 498 aa23.38■■□□□ 1.33
SMC4-222ENST00000490207 GSPT1P15170 499 aaKnown RBP23.38■■□□□ 1.33
SMC4-222ENST00000490207 RRP12Q5JTH9 1297 aaKnown RBP23.38■■□□□ 1.33
SMC4-222ENST00000490207 MFSD14CQ5VZR4 134 aa23.38■■□□□ 1.33
SMC4-222ENST00000490207 PRPF38AQ8NAV1 312 aaKnown RBP23.38■■□□□ 1.33
SMC4-222ENST00000490207 IL17RBQ9NRM6 502 aa23.38■■□□□ 1.33
SMC4-222ENST00000490207 BMP3P12645 472 aa23.37■■□□□ 1.33
SMC4-222ENST00000490207 CCND3P30281 292 aaPredicted RBP23.37■■□□□ 1.33
SMC4-222ENST00000490207 COPB2P35606 906 aa23.37■■□□□ 1.33
SMC4-222ENST00000490207 STAT3P40763 770 aa23.37■■□□□ 1.33
SMC4-222ENST00000490207 ABRAQ8N0Z2 381 aa23.37■■□□□ 1.33
SMC4-222ENST00000490207 KIFC2Q96AC6 838 aa23.37■■□□□ 1.33
SMC4-222ENST00000490207 FEM1BQ9UK73 627 aa23.37■■□□□ 1.33
SMC4-222ENST00000490207 ISY1Q9ULR0 285 aaKnown RBP23.37■■□□□ 1.33
SMC4-222ENST00000490207 FCER1AP12319 257 aa23.36■■□□□ 1.33
SMC4-222ENST00000490207 TBC1D10CQ8IV04 446 aa23.36■■□□□ 1.33
SMC4-222ENST00000490207 NBPF3Q9H094 633 aa23.36■■□□□ 1.33
SMC4-222ENST00000490207 SLC5A4Q9NY91 659 aa23.36■■□□□ 1.33
SMC4-222ENST00000490207 CTDP1Q9Y5B0 961 aaPredicted RBP23.36■■□□□ 1.33
SMC4-222ENST00000490207 COBLO75128 1261 aa23.35■■□□□ 1.33
SMC4-222ENST00000490207 AKNAD1Q5T1N1 836 aa23.35■■□□□ 1.33
SMC4-222ENST00000490207 OLFML2BQ68BL8 750 aa23.35■■□□□ 1.33
SMC4-222ENST00000490207 ANKLE1Q8NAG6 615 aa23.35■■□□□ 1.33
SMC4-222ENST00000490207 STAG1Q8WVM7 1258 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms