RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 ANKRD34BA5PLL1 514 aa8.63□□□□□ -1.03
VPS26A-206ENST00000489794 TP53P04637 393 aaPredicted RBP8.63□□□□□ -1.03
VPS26A-206ENST00000489794 ITGA4P13612 1032 aa8.63□□□□□ -1.03
VPS26A-206ENST00000489794 SERINC3Q13530 473 aa8.63□□□□□ -1.03
VPS26A-206ENST00000489794 CLEC16AQ2KHT3 1053 aa8.63□□□□□ -1.03
VPS26A-206ENST00000489794 AXDND1Q5T1B0 1012 aaPredicted RBP8.63□□□□□ -1.03
VPS26A-206ENST00000489794 TDRD10Q5VZ19 366 aaKnown RBP8.63□□□□□ -1.03
VPS26A-206ENST00000489794 CCDC113Q9H0I3 377 aa8.63□□□□□ -1.03
VPS26A-206ENST00000489794 OSBPL2Q9H1P3 480 aa8.63□□□□□ -1.03
VPS26A-206ENST00000489794 PLAGL2Q9UPG8 496 aa8.63□□□□□ -1.03
VPS26A-206ENST00000489794 SIGLEC6O43699 453 aa8.62□□□□□ -1.03
VPS26A-206ENST00000489794 LRRN2O75325 713 aa8.62□□□□□ -1.03
VPS26A-206ENST00000489794 PPM1BO75688 479 aa8.62□□□□□ -1.03
VPS26A-206ENST00000489794 GJB6O95452 261 aa8.62□□□□□ -1.03
VPS26A-206ENST00000489794 PRNPP04156 253 aa8.62□□□□□ -1.03
VPS26A-206ENST00000489794 SRFP11831 508 aa8.62□□□□□ -1.03
VPS26A-206ENST00000489794 CD247P20963 164 aa8.62□□□□□ -1.03
VPS26A-206ENST00000489794 HOXA10P31260 410 aaPredicted RBP8.62□□□□□ -1.03
VPS26A-206ENST00000489794 CD97P48960 835 aa8.62□□□□□ -1.03
VPS26A-206ENST00000489794 NMIQ13287 307 aaPredicted RBP8.62□□□□□ -1.03
VPS26A-206ENST00000489794 LRP8Q14114 963 aa8.62□□□□□ -1.03
VPS26A-206ENST00000489794 TMPRSS7Q7RTY8 843 aa8.62□□□□□ -1.03
VPS26A-206ENST00000489794 KRTAP1-3Q8IUG1 177 aa8.62□□□□□ -1.03
VPS26A-206ENST00000489794 CELF2-AS1Q8N7Q2 184 aa8.62□□□□□ -1.03
VPS26A-206ENST00000489794 SYTL5Q8TDW5 730 aaPredicted RBP8.62□□□□□ -1.03
VPS26A-206ENST00000489794 ZNF669Q96BR6 464 aaPredicted RBP8.62□□□□□ -1.03
VPS26A-206ENST00000489794 APBA2Q99767 749 aa8.62□□□□□ -1.03
VPS26A-206ENST00000489794 WHRNQ9P202 907 aa8.62□□□□□ -1.03
VPS26A-206ENST00000489794 MSRB2Q9Y3D2 182 aa8.62□□□□□ -1.03
VPS26A-206ENST00000489794 KIAA1324LA8MWY0 1029 aaPredicted RBP8.61□□□□□ -1.03
VPS26A-206ENST00000489794 NOL9Q5SY16 702 aaKnown RBP8.61□□□□□ -1.03
VPS26A-206ENST00000489794 CDKAL1Q5VV42 579 aa8.61□□□□□ -1.03
VPS26A-206ENST00000489794 DCAF15Q66K64 600 aa8.61□□□□□ -1.03
VPS26A-206ENST00000489794 DTX1Q86Y01 620 aa8.61□□□□□ -1.03
VPS26A-206ENST00000489794 ZNF655Q8N720 491 aaPredicted RBP8.61□□□□□ -1.03
VPS26A-206ENST00000489794 DAGLBQ8NCG7 672 aa8.61□□□□□ -1.03
VPS26A-206ENST00000489794 ST13P5Q8NFI4 369 aaPredicted RBP8.61□□□□□ -1.03
VPS26A-206ENST00000489794 HSPA12BQ96MM6 686 aa8.61□□□□□ -1.03
VPS26A-206ENST00000489794 PRDM14Q9GZV8 571 aa8.61□□□□□ -1.03
VPS26A-206ENST00000489794 KLHL25Q9H0H3 589 aa8.61□□□□□ -1.03
VPS26A-206ENST00000489794 GP6Q9HCN6 339 aa8.61□□□□□ -1.03
VPS26A-206ENST00000489794 ST7Q9NRC1 585 aa8.61□□□□□ -1.03
VPS26A-206ENST00000489794 FHOD1Q9Y613 1164 aa8.61□□□□□ -1.03
VPS26A-206ENST00000489794 PITPNM2Q9BZ72 1349 aa8.6□□□□□ -1.03
VPS26A-206ENST00000489794 VSIG10LQ86VR7 867 aa8.6□□□□□ -1.03
VPS26A-206ENST00000489794 TSPYL5Q86VY4 417 aaPredicted RBP8.6□□□□□ -1.03
VPS26A-206ENST00000489794 CRACR2BQ8N4Y2 399 aaPredicted RBP8.6□□□□□ -1.03
VPS26A-206ENST00000489794 DUSP15Q9H1R2 295 aaPredicted RBP8.6□□□□□ -1.03
VPS26A-206ENST00000489794 U3KQE9 123 aa8.6□□□□□ -1.03
VPS26A-206ENST00000489794 H3BS24 57 aa8.59□□□□□ -1.03
VPS26A-206ENST00000489794 AGRPO00253 132 aa8.59□□□□□ -1.03
VPS26A-206ENST00000489794 CBFA2T2O43439 604 aa8.59□□□□□ -1.03
VPS26A-206ENST00000489794 EPHX1P07099 455 aa8.59□□□□□ -1.03
VPS26A-206ENST00000489794 RASGRF1Q13972 1273 aa8.59□□□□□ -1.03
VPS26A-206ENST00000489794 ADAT2Q7Z6V5 191 aaKnown RBP8.59□□□□□ -1.03
VPS26A-206ENST00000489794 MICAL1Q8TDZ2 1067 aa8.59□□□□□ -1.03
VPS26A-206ENST00000489794 RCC1LQ96I51 464 aaKnown RBP8.59□□□□□ -1.03
VPS26A-206ENST00000489794 LNPKQ9C0E8 428 aa8.59□□□□□ -1.03
VPS26A-206ENST00000489794 CHST7Q9NS84 486 aa8.59□□□□□ -1.03
VPS26A-206ENST00000489794 SEMA3GQ9NS98 782 aa8.59□□□□□ -1.03
VPS26A-206ENST00000489794 FAM86C1Q9NVL1 165 aa8.59□□□□□ -1.03
VPS26A-206ENST00000489794 SLC5A6Q9Y289 635 aa8.59□□□□□ -1.03
VPS26A-206ENST00000489794 DIS3Q9Y2L1 958 aaKnown RBP8.59□□□□□ -1.03
VPS26A-206ENST00000489794 SF3B6Q9Y3B4 125 aaKnown RBP8.59□□□□□ -1.03
VPS26A-206ENST00000489794 ZNF451Q9Y4E5 1061 aa8.59□□□□□ -1.03
VPS26A-206ENST00000489794 IQCA1LA6NCM1 817 aa8.58□□□□□ -1.04
VPS26A-206ENST00000489794 SHOXO15266 292 aa8.58□□□□□ -1.04
VPS26A-206ENST00000489794 PDPK1O15530 556 aa8.58□□□□□ -1.04
VPS26A-206ENST00000489794 HYAL3O43820 417 aaPredicted RBP8.58□□□□□ -1.04
VPS26A-206ENST00000489794 SUSD5O60279 629 aa8.58□□□□□ -1.04
VPS26A-206ENST00000489794 ENDOUP21128 410 aaKnown RBP8.58□□□□□ -1.04
VPS26A-206ENST00000489794 AOC3Q16853 763 aa8.58□□□□□ -1.04
VPS26A-206ENST00000489794 POMZP3Q6PJE2 187 aa8.58□□□□□ -1.04
VPS26A-206ENST00000489794 DSCC1Q9BVC3 393 aa8.58□□□□□ -1.04
VPS26A-206ENST00000489794 HDAC8Q9BY41 377 aa8.58□□□□□ -1.04
VPS26A-206ENST00000489794 ANGEL1Q9UNK9 670 aaKnown RBP8.58□□□□□ -1.04
VPS26A-206ENST00000489794 B2RBV5 119 aa8.57□□□□□ -1.04
VPS26A-206ENST00000489794 PRAMEF1O95521 474 aa8.57□□□□□ -1.04
VPS26A-206ENST00000489794 GSNP06396 782 aa8.57□□□□□ -1.04
VPS26A-206ENST00000489794 SPINK2P20155 84 aa8.57□□□□□ -1.04
VPS26A-206ENST00000489794 TPP2P29144 1249 aaPredicted RBP8.57□□□□□ -1.04
VPS26A-206ENST00000489794 IFRD2Q12894 506 aaPredicted RBP8.57□□□□□ -1.04
VPS26A-206ENST00000489794 DPH6Q7L8W6 267 aa8.57□□□□□ -1.04
VPS26A-206ENST00000489794 UBE2FQ969M7 185 aa8.57□□□□□ -1.04
VPS26A-206ENST00000489794 DEPDC7Q96QD5 511 aa8.57□□□□□ -1.04
VPS26A-206ENST00000489794 SRPK1Q96SB4 655 aaKnown RBP8.57□□□□□ -1.04
VPS26A-206ENST00000489794 GFOD1Q9NXC2 390 aa8.57□□□□□ -1.04
VPS26A-206ENST00000489794 LMCD1Q9NZU5 365 aa8.57□□□□□ -1.04
VPS26A-206ENST00000489794 ZSWIM5Q9P217 1185 aa8.57□□□□□ -1.04
VPS26A-206ENST00000489794 SUGT1Q9Y2Z0 365 aa8.57□□□□□ -1.04
VPS26A-206ENST00000489794 SSTR4P31391 388 aa8.56□□□□□ -1.04
VPS26A-206ENST00000489794 ZNF445P59923 1031 aa8.56□□□□□ -1.04
VPS26A-206ENST00000489794 SNW1Q13573 536 aaKnown RBP8.56□□□□□ -1.04
VPS26A-206ENST00000489794 GAB4Q2WGN9 574 aa8.56□□□□□ -1.04
VPS26A-206ENST00000489794 CWF19L1Q69YN2 538 aaKnown RBP8.56□□□□□ -1.04
VPS26A-206ENST00000489794 TMC3Q7Z5M5 1100 aa8.56□□□□□ -1.04
VPS26A-206ENST00000489794 BCL7CQ8WUZ0 217 aaPredicted RBP8.56□□□□□ -1.04
VPS26A-206ENST00000489794 MRFAP1L1Q96HT8 127 aa8.56□□□□□ -1.04
VPS26A-206ENST00000489794 ZSWIM4Q9H7M6 989 aa8.56□□□□□ -1.04
VPS26A-206ENST00000489794 SUSD2Q9UGT4 822 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms