RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 SLC12A7Q9Y666 1083 aa18.83■□□□□ 0.6
CLIC4-203ENST00000489758 KLF18A0A0U1RQI7 1052 aa18.82■□□□□ 0.6
CLIC4-203ENST00000489758 IGF2BP3O00425 579 aaKnown RBP eCLIP18.82■□□□□ 0.6
CLIC4-203ENST00000489758 HOXA7P31268 230 aaPredicted RBP18.82■□□□□ 0.6
CLIC4-203ENST00000489758 MAP2K2P36507 400 aa18.82■□□□□ 0.6
CLIC4-203ENST00000489758 SREBF2Q12772 1141 aa18.82■□□□□ 0.6
CLIC4-203ENST00000489758 CHMP4CQ96CF2 233 aa18.82■□□□□ 0.6
CLIC4-203ENST00000489758 LARP6Q9BRS8 491 aaKnown RBP18.82■□□□□ 0.6
CLIC4-203ENST00000489758 RPAP3Q9H6T3 665 aaPredicted RBP18.82■□□□□ 0.6
CLIC4-203ENST00000489758 HPS5Q9UPZ3 1129 aa18.82■□□□□ 0.6
CLIC4-203ENST00000489758 LOC285556D6RIA3 1793 aa18.82■□□□□ 0.6
CLIC4-203ENST00000489758 BMP3P12645 472 aa18.81■□□□□ 0.6
CLIC4-203ENST00000489758 SLC1A4P43007 532 aa18.81■□□□□ 0.6
CLIC4-203ENST00000489758 ZNF543Q08ER8 600 aa18.81■□□□□ 0.6
CLIC4-203ENST00000489758 GRM4Q14833 912 aa18.81■□□□□ 0.6
CLIC4-203ENST00000489758 ANKRD1Q15327 319 aa18.81■□□□□ 0.6
CLIC4-203ENST00000489758 CATSPERGQ6ZRH7 1159 aa18.81■□□□□ 0.6
CLIC4-203ENST00000489758 RAB11FIP4Q86YS3 637 aa18.81■□□□□ 0.6
CLIC4-203ENST00000489758 IFNL1Q8IU54 200 aa18.81■□□□□ 0.6
CLIC4-203ENST00000489758 IL27Q8NEV9 243 aa18.81■□□□□ 0.6
CLIC4-203ENST00000489758 MAP3K14Q99558 947 aa18.81■□□□□ 0.6
CLIC4-203ENST00000489758 TPCN1Q9ULQ1 816 aa18.81■□□□□ 0.6
CLIC4-203ENST00000489758 SLC45A1Q9Y2W3 748 aa18.81■□□□□ 0.6
CLIC4-203ENST00000489758 NID2Q14112 1375 aa18.81■□□□□ 0.6
CLIC4-203ENST00000489758 FRMPD2Q68DX3 1309 aaPredicted RBP18.8■□□□□ 0.6
CLIC4-203ENST00000489758 PALM3A6NDB9 673 aaPredicted RBP18.8■□□□□ 0.6
CLIC4-203ENST00000489758 USP17L15C9J2P7 530 aa18.8■□□□□ 0.6
CLIC4-203ENST00000489758 USP17L13C9JLJ4 530 aa18.8■□□□□ 0.6
CLIC4-203ENST00000489758 USP17L11C9JVI0 530 aa18.8■□□□□ 0.6
CLIC4-203ENST00000489758 USP17L18D6R9N7 530 aa18.8■□□□□ 0.6
CLIC4-203ENST00000489758 USP17L22D6RA61 530 aa18.8■□□□□ 0.6
CLIC4-203ENST00000489758 USP17L17D6RBQ6 530 aa18.8■□□□□ 0.6
CLIC4-203ENST00000489758 USP17L19D6RCP7 530 aa18.8■□□□□ 0.6
CLIC4-203ENST00000489758 USP17L20D6RJB6 530 aa18.8■□□□□ 0.6
CLIC4-203ENST00000489758 PDHXO00330 501 aa18.8■□□□□ 0.6
CLIC4-203ENST00000489758 CD2BP2O95400 341 aaKnown RBP18.8■□□□□ 0.6
CLIC4-203ENST00000489758 RXRAP19793 462 aa18.8■□□□□ 0.6
CLIC4-203ENST00000489758 PDIA3P30101 505 aaKnown RBP18.8■□□□□ 0.6
CLIC4-203ENST00000489758 RCAN1P53805 252 aa18.8■□□□□ 0.6
CLIC4-203ENST00000489758 USP17L24Q0WX57 530 aa18.8■□□□□ 0.6
CLIC4-203ENST00000489758 KCTD1Q719H9 257 aa18.8■□□□□ 0.6
CLIC4-203ENST00000489758 MICU3Q86XE3 530 aa18.8■□□□□ 0.6
CLIC4-203ENST00000489758 REM2Q8IYK8 340 aaPredicted RBP18.8■□□□□ 0.6
CLIC4-203ENST00000489758 ZCCHC17Q9NP64 241 aaKnown RBP18.8■□□□□ 0.6
CLIC4-203ENST00000489758 MAD2L2Q9UI95 211 aa18.8■□□□□ 0.6
CLIC4-203ENST00000489758 GOLGA8BA8MQT2 603 aa18.79■□□□□ 0.6
CLIC4-203ENST00000489758 FOXN1O15353 648 aa18.79■□□□□ 0.6
CLIC4-203ENST00000489758 ZBTB43O43298 467 aa18.79■□□□□ 0.6
CLIC4-203ENST00000489758 PARP1P09874 1014 aaKnown RBP18.79■□□□□ 0.6
CLIC4-203ENST00000489758 GOLGA8HP0CJ92 632 aa18.79■□□□□ 0.6
CLIC4-203ENST00000489758 CALM1P0DP23 149 aa18.79■□□□□ 0.6
CLIC4-203ENST00000489758 CALM2P0DP24 149 aa18.79■□□□□ 0.6
CLIC4-203ENST00000489758 CALM3P0DP25 149 aa18.79■□□□□ 0.6
CLIC4-203ENST00000489758 CCDC96Q2M329 555 aa18.79■□□□□ 0.6
CLIC4-203ENST00000489758 ASPRV1Q53RT3 343 aa18.79■□□□□ 0.6
CLIC4-203ENST00000489758 TTBK2Q6IQ55 1244 aa18.79■□□□□ 0.6
CLIC4-203ENST00000489758 STAG2Q8N3U4 1231 aa18.79■□□□□ 0.6
CLIC4-203ENST00000489758 NUP133Q8WUM0 1156 aa18.79■□□□□ 0.6
CLIC4-203ENST00000489758 ZNF274Q96GC6 653 aaPredicted RBP18.79■□□□□ 0.6
CLIC4-203ENST00000489758 TANGO6Q9C0B7 1094 aa18.79■□□□□ 0.6
CLIC4-203ENST00000489758 FAM217BQ9NTX9 383 aaPredicted RBP18.79■□□□□ 0.6
CLIC4-203ENST00000489758 FBXO28Q9NVF7 368 aa18.79■□□□□ 0.6
CLIC4-203ENST00000489758 PLA2G6O60733 806 aa18.78■□□□□ 0.6
CLIC4-203ENST00000489758 GPATCH4Q5T3I0 446 aaKnown RBP18.78■□□□□ 0.6
CLIC4-203ENST00000489758 POTEEQ6S8J3 1075 aa18.78■□□□□ 0.6
CLIC4-203ENST00000489758 BTNL9Q6UXG8 535 aa18.78■□□□□ 0.6
CLIC4-203ENST00000489758 SYNE3Q6ZMZ3 975 aa18.78■□□□□ 0.6
CLIC4-203ENST00000489758 CCDC144CPQ8IYA2 1237 aa18.78■□□□□ 0.6
CLIC4-203ENST00000489758 FANCBQ8NB91 859 aa18.78■□□□□ 0.6
CLIC4-203ENST00000489758 ASCC2Q9H1I8 757 aaPredicted RBP18.78■□□□□ 0.6
CLIC4-203ENST00000489758 GPCPD1Q9NPB8 672 aa18.78■□□□□ 0.6
CLIC4-203ENST00000489758 FEM1BQ9UK73 627 aa18.78■□□□□ 0.6
CLIC4-203ENST00000489758 PTPRFP10586 1907 aa18.78■□□□□ 0.6
CLIC4-203ENST00000489758 TMEM232C9JQI7 657 aa18.77■□□□□ 0.6
CLIC4-203ENST00000489758 ST18O60284 1047 aa18.77■□□□□ 0.6
CLIC4-203ENST00000489758 CTCFP49711 727 aaPredicted RBP18.77■□□□□ 0.6
CLIC4-203ENST00000489758 PABPC4Q13310 644 aaKnown RBP eCLIP18.77■□□□□ 0.6
CLIC4-203ENST00000489758 SLC35G1Q2M3R5 365 aa18.77■□□□□ 0.6
CLIC4-203ENST00000489758 NOL8Q76FK4 1167 aaKnown RBP18.77■□□□□ 0.6
CLIC4-203ENST00000489758 LIMCH1Q9UPQ0 1083 aa18.77■□□□□ 0.6
CLIC4-203ENST00000489758 GOLGA8AA7E2F4 631 aa18.76■□□□□ 0.59
CLIC4-203ENST00000489758 FLOT1O75955 427 aa18.76■□□□□ 0.59
CLIC4-203ENST00000489758 LARGE1O95461 756 aa18.76■□□□□ 0.59
CLIC4-203ENST00000489758 CYP2C8P10632 490 aa18.76■□□□□ 0.59
CLIC4-203ENST00000489758 CDC27P30260 824 aa18.76■□□□□ 0.59
CLIC4-203ENST00000489758 SLC16A2P36021 539 aa18.76■□□□□ 0.59
CLIC4-203ENST00000489758 STAT2P52630 851 aa18.76■□□□□ 0.59
CLIC4-203ENST00000489758 COG2Q14746 738 aa18.76■□□□□ 0.59
CLIC4-203ENST00000489758 ME3Q16798 604 aa18.76■□□□□ 0.59
CLIC4-203ENST00000489758 CTCFLQ8NI51 663 aaPredicted RBP18.76■□□□□ 0.59
CLIC4-203ENST00000489758 P2RX7Q99572 595 aaKnown RBP18.76■□□□□ 0.59
CLIC4-203ENST00000489758 SLF1Q9BQI6 1058 aa18.76■□□□□ 0.59
CLIC4-203ENST00000489758 CPVLQ9H3G5 476 aa18.76■□□□□ 0.59
CLIC4-203ENST00000489758 PPP1R9AQ9ULJ8 1098 aa18.76■□□□□ 0.59
CLIC4-203ENST00000489758 NAP1L2Q9ULW6 460 aaPredicted RBP18.76■□□□□ 0.59
CLIC4-203ENST00000489758 ADAMTS5Q9UNA0 930 aa18.76■□□□□ 0.59
CLIC4-203ENST00000489758 MYH4Q9Y623 1939 aa18.76■□□□□ 0.59
CLIC4-203ENST00000489758 MYPNQ86TC9 1320 aa18.75■□□□□ 0.59
CLIC4-203ENST00000489758 SPDYE16A6NNV3 312 aaPredicted RBP18.75■□□□□ 0.59
CLIC4-203ENST00000489758 KLRF2D3W0D1 207 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms