RNA–Protein interactions for RNA: ENST00000489678.1

ABCD4-214, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 3,008 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-214ENST00000489678 ZNF280AP59817 542 aaPredicted RBP11.91□□□□□ -0.5
ABCD4-214ENST00000489678 UBXN2AP68543 259 aa11.91□□□□□ -0.5
ABCD4-214ENST00000489678 IFFO2Q5TF58 517 aa11.91□□□□□ -0.5
ABCD4-214ENST00000489678 DPF2Q92785 391 aa11.91□□□□□ -0.5
ABCD4-214ENST00000489678 COA7Q96BR5 231 aa11.91□□□□□ -0.5
ABCD4-214ENST00000489678 R3HDMLQ9H3Y0 253 aa11.91□□□□□ -0.5
ABCD4-214ENST00000489678 FAM217BQ9NTX9 383 aaPredicted RBP11.91□□□□□ -0.5
ABCD4-214ENST00000489678 ORC3Q9UBD5 711 aaPredicted RBP11.91□□□□□ -0.5
ABCD4-214ENST00000489678 KIF13BQ9NQT8 1826 aa11.91□□□□□ -0.5
ABCD4-214ENST00000489678 PDS5AQ29RF7 1337 aaKnown RBP11.91□□□□□ -0.5
ABCD4-214ENST00000489678 AP5Z1O43299 807 aa11.91□□□□□ -0.5
ABCD4-214ENST00000489678 SORBS3O60504 671 aa11.91□□□□□ -0.5
ABCD4-214ENST00000489678 RTN1Q16799 776 aa11.91□□□□□ -0.5
ABCD4-214ENST00000489678 FAM83BQ5T0W9 1011 aa11.91□□□□□ -0.5
ABCD4-214ENST00000489678 SYNE3Q6ZMZ3 975 aa11.91□□□□□ -0.5
ABCD4-214ENST00000489678 SRBD1Q8N5C6 995 aaKnown RBP11.91□□□□□ -0.5
ABCD4-214ENST00000489678 CDCA5Q96FF9 252 aa11.91□□□□□ -0.5
ABCD4-214ENST00000489678 DACT1Q9NYF0 836 aa11.91□□□□□ -0.5
ABCD4-214ENST00000489678 MSNP26038 577 aaKnown RBP11.9□□□□□ -0.5
ABCD4-214ENST00000489678 GABPAQ06546 454 aa11.9□□□□□ -0.5
ABCD4-214ENST00000489678 SEC23AQ15436 765 aa11.9□□□□□ -0.5
ABCD4-214ENST00000489678 ALX1Q15699 326 aa11.9□□□□□ -0.5
ABCD4-214ENST00000489678 UVSSAQ2YD98 709 aa11.9□□□□□ -0.5
ABCD4-214ENST00000489678 CATIPQ7Z7H3 387 aa11.9□□□□□ -0.5
ABCD4-214ENST00000489678 ZNF274Q96GC6 653 aaPredicted RBP11.9□□□□□ -0.5
ABCD4-214ENST00000489678 PURBQ96QR8 312 aaKnown RBP11.9□□□□□ -0.5
ABCD4-214ENST00000489678 ZIC5Q96T25 663 aa11.9□□□□□ -0.5
ABCD4-214ENST00000489678 IDI2Q9BXS1 227 aa11.9□□□□□ -0.5
ABCD4-214ENST00000489678 MRVI1Q9Y6F6 885 aa11.9□□□□□ -0.5
ABCD4-214ENST00000489678 SBF1O95248 1867 aa11.9□□□□□ -0.5
ABCD4-214ENST00000489678 LTBP3Q9NS15 1303 aa11.9□□□□□ -0.5
ABCD4-214ENST00000489678 FDPSP14324 419 aaKnown RBP11.9□□□□□ -0.5
ABCD4-214ENST00000489678 NR5A1Q13285 461 aa11.9□□□□□ -0.5
ABCD4-214ENST00000489678 VGLL4Q14135 290 aa11.9□□□□□ -0.5
ABCD4-214ENST00000489678 WDR78Q5VTH9 848 aa11.9□□□□□ -0.5
ABCD4-214ENST00000489678 HEATR3Q7Z4Q2 680 aa11.9□□□□□ -0.5
ABCD4-214ENST00000489678 DHX37Q8IY37 1157 aaKnown RBP11.9□□□□□ -0.5
ABCD4-214ENST00000489678 FBXL16Q8N461 479 aa11.9□□□□□ -0.5
ABCD4-214ENST00000489678 FANCBQ8NB91 859 aa11.9□□□□□ -0.5
ABCD4-214ENST00000489678 GJA10Q969M2 543 aa11.9□□□□□ -0.5
ABCD4-214ENST00000489678 TANGO6Q9C0B7 1094 aa11.9□□□□□ -0.5
ABCD4-214ENST00000489678 MTMR4Q9NYA4 1195 aa11.9□□□□□ -0.5
ABCD4-214ENST00000489678 ZKSCAN5Q9Y2L8 839 aa11.9□□□□□ -0.5
ABCD4-214ENST00000489678 TMEM232C9JQI7 657 aa11.89□□□□□ -0.51
ABCD4-214ENST00000489678 NR1I2O75469 434 aa11.89□□□□□ -0.51
ABCD4-214ENST00000489678 EVCP57679 992 aa11.89□□□□□ -0.51
ABCD4-214ENST00000489678 PLS1Q14651 629 aa11.89□□□□□ -0.51
ABCD4-214ENST00000489678 OXER1Q8TDS5 423 aa11.89□□□□□ -0.51
ABCD4-214ENST00000489678 ZBTB21Q9ULJ3 1066 aa11.89□□□□□ -0.51
ABCD4-214ENST00000489678 DLEC1Q9Y238 1755 aa11.89□□□□□ -0.51
ABCD4-214ENST00000489678 DOCK2Q92608 1830 aa11.89□□□□□ -0.51
ABCD4-214ENST00000489678 USP17L10C9JJH3 530 aa11.89□□□□□ -0.51
ABCD4-214ENST00000489678 SLC1A4P43007 532 aa11.89□□□□□ -0.51
ABCD4-214ENST00000489678 PIGSQ96S52 555 aa11.89□□□□□ -0.51
ABCD4-214ENST00000489678 CNNM2Q9H8M5 875 aa11.89□□□□□ -0.51
ABCD4-214ENST00000489678 CABP5Q9NP86 173 aa11.89□□□□□ -0.51
ABCD4-214ENST00000489678 SUGT1Q9Y2Z0 365 aa11.89□□□□□ -0.51
ABCD4-214ENST00000489678 SMCHD1A6NHR9 2005 aa11.89□□□□□ -0.51
ABCD4-214ENST00000489678 F5H6K3 240 aa11.89□□□□□ -0.51
ABCD4-214ENST00000489678 CYTH3O43739 400 aa11.89□□□□□ -0.51
ABCD4-214ENST00000489678 ADCY5O95622 1261 aa11.89□□□□□ -0.51
ABCD4-214ENST00000489678 YY1P25490 414 aa11.89□□□□□ -0.51
ABCD4-214ENST00000489678 KLRC3Q07444 240 aa11.89□□□□□ -0.51
ABCD4-214ENST00000489678 TROAPQ12815 778 aa11.89□□□□□ -0.51
ABCD4-214ENST00000489678 CKAP2LQ8IYA6 745 aa11.89□□□□□ -0.51
ABCD4-214ENST00000489678 SHISA4Q96DD7 197 aa11.89□□□□□ -0.51
ABCD4-214ENST00000489678 NUP62CLQ9H1M0 184 aa11.89□□□□□ -0.51
ABCD4-214ENST00000489678 ZSCAN16Q9H4T2 348 aaPredicted RBP11.89□□□□□ -0.51
ABCD4-214ENST00000489678 CCDC39Q9UFE4 941 aa11.89□□□□□ -0.51
ABCD4-214ENST00000489678 EYSQ5T1H1 3165 aa11.88□□□□□ -0.51
ABCD4-214ENST00000489678 KLRF2D3W0D1 207 aa11.88□□□□□ -0.51
ABCD4-214ENST00000489678 IRF6O14896 467 aa11.88□□□□□ -0.51
ABCD4-214ENST00000489678 TNNI2P48788 182 aa11.88□□□□□ -0.51
ABCD4-214ENST00000489678 HMGN5P82970 282 aaKnown RBP11.88□□□□□ -0.51
ABCD4-214ENST00000489678 MYH1P12882 1939 aa11.88□□□□□ -0.51
ABCD4-214ENST00000489678 ZNF500O60304 480 aaPredicted RBP11.88□□□□□ -0.51
ABCD4-214ENST00000489678 RPS12P25398 132 aaKnown RBP11.88□□□□□ -0.51
ABCD4-214ENST00000489678 MAP3K11Q16584 847 aa11.88□□□□□ -0.51
ABCD4-214ENST00000489678 SBK1Q52WX2 424 aa11.88□□□□□ -0.51
ABCD4-214ENST00000489678 TYW1BQ6NUM6 668 aa11.88□□□□□ -0.51
ABCD4-214ENST00000489678 SMAP1Q8IYB5 467 aaPredicted RBP11.88□□□□□ -0.51
ABCD4-214ENST00000489678 NDUFB10O96000 172 aa11.87□□□□□ -0.51
ABCD4-214ENST00000489678 GADL1Q6ZQY3 521 aa11.87□□□□□ -0.51
ABCD4-214ENST00000489678 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.87□□□□□ -0.51
ABCD4-214ENST00000489678 CTCFLQ8NI51 663 aaPredicted RBP11.87□□□□□ -0.51
ABCD4-214ENST00000489678 TBC1D5Q92609 795 aa11.87□□□□□ -0.51
ABCD4-214ENST00000489678 ZBED3Q96IU2 234 aaPredicted RBP11.87□□□□□ -0.51
ABCD4-214ENST00000489678 PAGR1Q9BTK6 254 aa11.87□□□□□ -0.51
ABCD4-214ENST00000489678 GOLGA6L4A6NEF3 574 aa11.87□□□□□ -0.51
ABCD4-214ENST00000489678 USP2O75604 605 aaPredicted RBP11.87□□□□□ -0.51
ABCD4-214ENST00000489678 MYCP01106 439 aaPredicted RBP11.87□□□□□ -0.51
ABCD4-214ENST00000489678 CAP2P40123 477 aa11.87□□□□□ -0.51
ABCD4-214ENST00000489678 SLFN13Q68D06 897 aa11.87□□□□□ -0.51
ABCD4-214ENST00000489678 USP28Q96RU2 1077 aa11.87□□□□□ -0.51
ABCD4-214ENST00000489678 ABT1Q9ULW3 272 aaKnown RBP11.87□□□□□ -0.51
ABCD4-214ENST00000489678 ZBTB22O15209 634 aa11.86□□□□□ -0.51
ABCD4-214ENST00000489678 CCDC192P0DO97 292 aa11.86□□□□□ -0.51
ABCD4-214ENST00000489678 HOXA13P31271 388 aaPredicted RBP11.86□□□□□ -0.51
ABCD4-214ENST00000489678 TYRO3Q06418 890 aa11.86□□□□□ -0.51
ABCD4-214ENST00000489678 GNL2Q13823 731 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms