RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 MYH7P12883 1935 aa20.47■□□□□ 0.87
TOP3B-217ENST00000489581 CDK8P49336 464 aa20.47■□□□□ 0.87
TOP3B-217ENST00000489581 TMEM132BQ14DG7 1078 aa20.47■□□□□ 0.87
TOP3B-217ENST00000489581 SNX17Q15036 470 aa20.47■□□□□ 0.87
TOP3B-217ENST00000489581 BOLA2Q9H3K6 86 aa20.47■□□□□ 0.87
TOP3B-217ENST00000489581 SH2D4AQ9H788 454 aa20.47■□□□□ 0.87
TOP3B-217ENST00000489581 PDLIM7Q9NR12 457 aa20.47■□□□□ 0.87
TOP3B-217ENST00000489581 ATP8A2Q9NTI2 1148 aa20.47■□□□□ 0.87
TOP3B-217ENST00000489581 PAG1Q9NWQ8 432 aa20.47■□□□□ 0.87
TOP3B-217ENST00000489581 TRIM43BA6NCK2 446 aa20.46■□□□□ 0.87
TOP3B-217ENST00000489581 WDR46O15213 610 aaKnown RBP20.46■□□□□ 0.87
TOP3B-217ENST00000489581 PGK2P07205 417 aa20.46■□□□□ 0.87
TOP3B-217ENST00000489581 ADD2P35612 726 aa20.46■□□□□ 0.87
TOP3B-217ENST00000489581 TRIM43Q96BQ3 446 aaPredicted RBP20.46■□□□□ 0.87
TOP3B-217ENST00000489581 CCDC17Q96LX7 622 aa20.46■□□□□ 0.87
TOP3B-217ENST00000489581 FBXO28Q9NVF7 368 aa20.46■□□□□ 0.87
TOP3B-217ENST00000489581 USP17L12C9JPN9 530 aa20.45■□□□□ 0.86
TOP3B-217ENST00000489581 USP17L21D6R901 530 aa20.45■□□□□ 0.86
TOP3B-217ENST00000489581 SLC25A27O95847 323 aa20.45■□□□□ 0.86
TOP3B-217ENST00000489581 CHGBP05060 677 aa20.45■□□□□ 0.86
TOP3B-217ENST00000489581 EEF2P13639 858 aaKnown RBP20.45■□□□□ 0.86
TOP3B-217ENST00000489581 C12orf60Q5U649 245 aa20.45■□□□□ 0.86
TOP3B-217ENST00000489581 MMP19Q99542 508 aa20.45■□□□□ 0.86
TOP3B-217ENST00000489581 RAD21O60216 631 aa20.44■□□□□ 0.86
TOP3B-217ENST00000489581 TLE2Q04725 743 aa20.44■□□□□ 0.86
TOP3B-217ENST00000489581 C16orf86Q6ZW13 317 aa20.44■□□□□ 0.86
TOP3B-217ENST00000489581 SIRT2Q8IXJ6 389 aa20.44■□□□□ 0.86
TOP3B-217ENST00000489581 RPAP2Q8IXW5 612 aaPredicted RBP20.44■□□□□ 0.86
TOP3B-217ENST00000489581 CDX2Q99626 313 aaPredicted RBP20.44■□□□□ 0.86
TOP3B-217ENST00000489581 SEMA6BQ9H3T3 888 aa20.44■□□□□ 0.86
TOP3B-217ENST00000489581 XPNPEP3Q9NQH7 507 aa20.44■□□□□ 0.86
TOP3B-217ENST00000489581 ADAMTS5Q9UNA0 930 aa20.44■□□□□ 0.86
TOP3B-217ENST00000489581 HMMRO75330 724 aa20.43■□□□□ 0.86
TOP3B-217ENST00000489581 PGK1P00558 417 aa20.43■□□□□ 0.86
TOP3B-217ENST00000489581 RARBP10826 455 aa20.43■□□□□ 0.86
TOP3B-217ENST00000489581 TAL1P17542 331 aaPredicted RBP20.43■□□□□ 0.86
TOP3B-217ENST00000489581 C1orf53Q5VUE5 145 aa20.43■□□□□ 0.86
TOP3B-217ENST00000489581 RIOX2Q8IUF8 465 aa20.43■□□□□ 0.86
TOP3B-217ENST00000489581 AMOTL1Q8IY63 956 aa20.43■□□□□ 0.86
TOP3B-217ENST00000489581 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.43■□□□□ 0.863e-11■■■■□ 21.9
TOP3B-217ENST00000489581 PHF24Q9UPV7 400 aa20.43■□□□□ 0.86
TOP3B-217ENST00000489581 EYSQ5T1H1 3165 aa20.43■□□□□ 0.86
TOP3B-217ENST00000489581 MYO9BQ13459 2157 aa20.42■□□□□ 0.86
TOP3B-217ENST00000489581 ATP5JP18859 108 aa20.42■□□□□ 0.86
TOP3B-217ENST00000489581 ITGB8P26012 769 aa20.42■□□□□ 0.86
TOP3B-217ENST00000489581 STAT3P40763 770 aa20.42■□□□□ 0.86
TOP3B-217ENST00000489581 ZNF792Q3KQV3 632 aa20.42■□□□□ 0.86
TOP3B-217ENST00000489581 TINF2Q9BSI4 451 aa20.42■□□□□ 0.86
TOP3B-217ENST00000489581 KANSL2Q9H9L4 492 aa20.42■□□□□ 0.86
TOP3B-217ENST00000489581 SLC4A4Q9Y6R1 1079 aa20.42■□□□□ 0.86
TOP3B-217ENST00000489581 VWA5AO00534 786 aa20.41■□□□□ 0.86
TOP3B-217ENST00000489581 RAB11FIP3O75154 756 aa20.41■□□□□ 0.86
TOP3B-217ENST00000489581 KCTD2Q14681 263 aa20.41■□□□□ 0.86
TOP3B-217ENST00000489581 FAM83BQ5T0W9 1011 aa20.41■□□□□ 0.86
TOP3B-217ENST00000489581 RNF180Q86T96 592 aa20.41■□□□□ 0.86
TOP3B-217ENST00000489581 DDRGK1Q96HY6 314 aa20.41■□□□□ 0.86
TOP3B-217ENST00000489581 HAUS7Q99871 368 aa20.41■□□□□ 0.86
TOP3B-217ENST00000489581 GOPCQ9HD26 462 aa20.41■□□□□ 0.86
TOP3B-217ENST00000489581 NRBP1Q9UHY1 535 aa20.41■□□□□ 0.86
TOP3B-217ENST00000489581 PPP1R9AQ9ULJ8 1098 aa20.41■□□□□ 0.86
TOP3B-217ENST00000489581 COG6Q9Y2V7 657 aa20.41■□□□□ 0.86
TOP3B-217ENST00000489581 TACC3Q9Y6A5 838 aa20.41■□□□□ 0.86
TOP3B-217ENST00000489581 CDH23Q9H251 3354 aa20.41■□□□□ 0.86
TOP3B-217ENST00000489581 VCANP13611 3396 aa20.4■□□□□ 0.86
TOP3B-217ENST00000489581 SMAD3P84022 425 aaKnown RBP20.4■□□□□ 0.86
TOP3B-217ENST00000489581 CTR9Q6PD62 1173 aa20.4■□□□□ 0.86
TOP3B-217ENST00000489581 MAFAQ8NHW3 353 aaPredicted RBP20.4■□□□□ 0.86
TOP3B-217ENST00000489581 LENG1Q96BZ8 264 aaPredicted RBP20.4■□□□□ 0.86
TOP3B-217ENST00000489581 TTYH1Q9H313 450 aaPredicted RBP20.4■□□□□ 0.86
TOP3B-217ENST00000489581 DIS3Q9Y2L1 958 aaKnown RBP20.4■□□□□ 0.86
TOP3B-217ENST00000489581 MCM3APO60318 1980 aa20.39■□□□□ 0.86
TOP3B-217ENST00000489581 PRUNE2Q8WUY3 3088 aa20.39■□□□□ 0.85
TOP3B-217ENST00000489581 CLTBP09497 229 aa20.39■□□□□ 0.85
TOP3B-217ENST00000489581 ZNF865P0CJ78 1059 aaPredicted RBP20.39■□□□□ 0.85
TOP3B-217ENST00000489581 MS4A1P11836 297 aa20.39■□□□□ 0.85
TOP3B-217ENST00000489581 UBE3CQ15386 1083 aa20.39■□□□□ 0.85
TOP3B-217ENST00000489581 REPS2Q8NFH8 660 aa20.39■□□□□ 0.85
TOP3B-217ENST00000489581 MYLIPQ8WY64 445 aa20.39■□□□□ 0.85
TOP3B-217ENST00000489581 PUS7LQ9H0K6 701 aaKnown RBP20.39■□□□□ 0.85
TOP3B-217ENST00000489581 ZBTB40Q9NUA8 1239 aa20.39■□□□□ 0.85
TOP3B-217ENST00000489581 ZNF214Q9UL59 606 aaPredicted RBP20.39■□□□□ 0.85
TOP3B-217ENST00000489581 A0A1W2PQ45 241 aaPredicted RBP20.38■□□□□ 0.85
TOP3B-217ENST00000489581 A0A1W2PQY0 241 aa20.38■□□□□ 0.85
TOP3B-217ENST00000489581 PQBP1O60828 265 aaKnown RBP20.38■□□□□ 0.85
TOP3B-217ENST00000489581 EPHB4P54760 987 aa20.38■□□□□ 0.85
TOP3B-217ENST00000489581 STK11IPQ8N1F8 1099 aa20.38■□□□□ 0.85
TOP3B-217ENST00000489581 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.38■□□□□ 0.85
TOP3B-217ENST00000489581 DDX19BQ9UMR2 479 aa20.38■□□□□ 0.85
TOP3B-217ENST00000489581 MYH4Q9Y623 1939 aa20.37■□□□□ 0.85
TOP3B-217ENST00000489581 ZBED9Q6R2W3 1325 aa20.37■□□□□ 0.85
TOP3B-217ENST00000489581 AKR1A1P14550 325 aa20.37■□□□□ 0.85
TOP3B-217ENST00000489581 RAG1P15918 1043 aa20.37■□□□□ 0.85
TOP3B-217ENST00000489581 RNPC3Q96LT9 517 aaKnown RBP20.37■□□□□ 0.85
TOP3B-217ENST00000489581 NUP88Q99567 741 aaPredicted RBP20.37■□□□□ 0.85
TOP3B-217ENST00000489581 CNPY2Q9Y2B0 182 aa20.37■□□□□ 0.85
TOP3B-217ENST00000489581 GREB1LQ9C091 1923 aaPredicted RBP20.37■□□□□ 0.85
TOP3B-217ENST00000489581 KIAA0355O15063 1070 aa20.36■□□□□ 0.85
TOP3B-217ENST00000489581 COPB2P35606 906 aa20.36■□□□□ 0.85
TOP3B-217ENST00000489581 SLC4A3P48751 1232 aa20.36■□□□□ 0.85
TOP3B-217ENST00000489581 MIER1Q8N108 512 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms