RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 NOM1Q5C9Z4 860 aaKnown RBP16.93■□□□□ 0.3
HLA-F-229ENST00000489502 KCTD1Q719H9 257 aa16.93■□□□□ 0.3
HLA-F-229ENST00000489502 ATG4CQ96DT6 458 aa16.93■□□□□ 0.3
HLA-F-229ENST00000489502 USP26Q9BXU7 913 aa16.93■□□□□ 0.3
HLA-F-229ENST00000489502 ARHGAP39Q9C0H5 1083 aa16.93■□□□□ 0.3
HLA-F-229ENST00000489502 TXNRD2Q9NNW7 524 aa16.93■□□□□ 0.3
HLA-F-229ENST00000489502 PRDM10Q9NQV6 1147 aa16.93■□□□□ 0.3
HLA-F-229ENST00000489502 GPHNQ9NQX3 736 aaPredicted RBP16.93■□□□□ 0.3
HLA-F-229ENST00000489502 SNX14Q9Y5W7 946 aa16.93■□□□□ 0.3
HLA-F-229ENST00000489502 SEC24BO95487 1268 aa16.92■□□□□ 0.3
HLA-F-229ENST00000489502 BMP3P12645 472 aa16.92■□□□□ 0.3
HLA-F-229ENST00000489502 SLC1A4P43007 532 aa16.92■□□□□ 0.3
HLA-F-229ENST00000489502 GCLCP48506 637 aaPredicted RBP16.92■□□□□ 0.3
HLA-F-229ENST00000489502 FAM110CQ1W6H9 321 aa16.92■□□□□ 0.3
HLA-F-229ENST00000489502 CCDC178Q5BJE1 867 aa16.92■□□□□ 0.3
HLA-F-229ENST00000489502 IFIT1BQ5T764 474 aaKnown RBP16.92■□□□□ 0.3
HLA-F-229ENST00000489502 DGKHQ86XP1 1220 aa16.92■□□□□ 0.3
HLA-F-229ENST00000489502 PNMA1Q8ND90 353 aa16.92■□□□□ 0.3
HLA-F-229ENST00000489502 KCNB2Q92953 911 aa16.92■□□□□ 0.3
HLA-F-229ENST00000489502 GMCL1Q96IK5 515 aa16.92■□□□□ 0.3
HLA-F-229ENST00000489502 TCEANC2Q96MN5 208 aa16.92■□□□□ 0.3
HLA-F-229ENST00000489502 TTC14Q96N46 770 aa16.92■□□□□ 0.3
HLA-F-229ENST00000489502 LRRC2Q9BYS8 371 aa16.92■□□□□ 0.3
HLA-F-229ENST00000489502 KAT14Q9H8E8 782 aa16.92■□□□□ 0.3
HLA-F-229ENST00000489502 FRMPD2Q68DX3 1309 aaPredicted RBP16.92■□□□□ 0.3
HLA-F-229ENST00000489502 CNMDO75829 334 aa16.91■□□□□ 0.3
HLA-F-229ENST00000489502 PDHBP11177 359 aa16.91■□□□□ 0.3
HLA-F-229ENST00000489502 CPA1P15085 419 aa16.91■□□□□ 0.3
HLA-F-229ENST00000489502 CTGFP29279 349 aa16.91■□□□□ 0.3
HLA-F-229ENST00000489502 MCM5P33992 734 aa16.91■□□□□ 0.3
HLA-F-229ENST00000489502 LACTBP83111 547 aaPredicted RBP16.91■□□□□ 0.3
HLA-F-229ENST00000489502 KRT32Q14532 448 aa16.91■□□□□ 0.3
HLA-F-229ENST00000489502 COG2Q14746 738 aa16.91■□□□□ 0.3
HLA-F-229ENST00000489502 TMEM67Q5HYA8 995 aa16.91■□□□□ 0.3
HLA-F-229ENST00000489502 JAKMIP1Q96N16 626 aaKnown RBP16.91■□□□□ 0.3
HLA-F-229ENST00000489502 NEK1Q96PY6 1258 aa16.91■□□□□ 0.3
HLA-F-229ENST00000489502 SLF1Q9BQI6 1058 aa16.91■□□□□ 0.3
HLA-F-229ENST00000489502 PPP1R9AQ9ULJ8 1098 aa16.91■□□□□ 0.3
HLA-F-229ENST00000489502 ERICH2A1L162 156 aa16.9■□□□□ 0.3
HLA-F-229ENST00000489502 TMEM232C9JQI7 657 aa16.9■□□□□ 0.3
HLA-F-229ENST00000489502 SH2B2O14492 632 aaPredicted RBP16.9■□□□□ 0.3
HLA-F-229ENST00000489502 EPB41L2O43491 1005 aaKnown RBP16.9■□□□□ 0.3
HLA-F-229ENST00000489502 DSG3P32926 999 aa16.9■□□□□ 0.3
HLA-F-229ENST00000489502 IKQ13123 557 aaPredicted RBP16.9■□□□□ 0.3
HLA-F-229ENST00000489502 WTAPQ15007 396 aa16.9■□□□□ 0.3
HLA-F-229ENST00000489502 SART3Q15020 963 aaKnown RBP16.9■□□□□ 0.3
HLA-F-229ENST00000489502 TSGA10IPQ3SY00 556 aa16.9■□□□□ 0.3
HLA-F-229ENST00000489502 DCAF4Q8WV16 495 aa16.9■□□□□ 0.3
HLA-F-229ENST00000489502 ANKS1AQ92625 1134 aa16.9■□□□□ 0.3
HLA-F-229ENST00000489502 ERO1AQ96HE7 468 aa16.9■□□□□ 0.3
HLA-F-229ENST00000489502 BTBD7Q9P203 1132 aa16.9■□□□□ 0.3
HLA-F-229ENST00000489502 RBPJLQ9UBG7 517 aa16.9■□□□□ 0.3
HLA-F-229ENST00000489502 MORF4L1Q9UBU8 362 aa16.9■□□□□ 0.3
HLA-F-229ENST00000489502 MYPNQ86TC9 1320 aa16.9■□□□□ 0.3
HLA-F-229ENST00000489502 HTTP42858 3142 aa16.89■□□□□ 0.29
HLA-F-229ENST00000489502 ERVK-9P63128 1117 aa16.89■□□□□ 0.29
HLA-F-229ENST00000489502 ERVK-24P63145 666 aa16.89■□□□□ 0.29
HLA-F-229ENST00000489502 TTBK2Q6IQ55 1244 aa16.89■□□□□ 0.29
HLA-F-229ENST00000489502 LBX2Q6XYB7 198 aa16.89■□□□□ 0.29
HLA-F-229ENST00000489502 IGDCC4Q8TDY8 1250 aa16.89■□□□□ 0.29
HLA-F-229ENST00000489502 GTF3C2Q8WUA4 911 aaPredicted RBP16.89■□□□□ 0.29
HLA-F-229ENST00000489502 KIFC2Q96AC6 838 aa16.89■□□□□ 0.29
HLA-F-229ENST00000489502 LY9Q9HBG7 655 aa16.89■□□□□ 0.29
HLA-F-229ENST00000489502 GPCPD1Q9NPB8 672 aa16.89■□□□□ 0.29
HLA-F-229ENST00000489502 GOLGA8HP0CJ92 632 aa16.88■□□□□ 0.29
HLA-F-229ENST00000489502 SNHG28P0DPA3 235 aa16.88■□□□□ 0.29
HLA-F-229ENST00000489502 STAT2P52630 851 aa16.88■□□□□ 0.29
HLA-F-229ENST00000489502 ZNF543Q08ER8 600 aa16.88■□□□□ 0.29
HLA-F-229ENST00000489502 COL13A1Q5TAT6 717 aaPredicted RBP16.88■□□□□ 0.29
HLA-F-229ENST00000489502 TRIM47Q96LD4 638 aa16.88■□□□□ 0.29
HLA-F-229ENST00000489502 PORCNQ9H237 461 aa16.88■□□□□ 0.29
HLA-F-229ENST00000489502 FEM1BQ9UK73 627 aa16.88■□□□□ 0.29
HLA-F-229ENST00000489502 RABGAP1Q9Y3P9 1069 aa16.88■□□□□ 0.29
HLA-F-229ENST00000489502 DOCK3Q8IZD9 2030 aa16.87■□□□□ 0.29
HLA-F-229ENST00000489502 VWA5AO00534 786 aa16.87■□□□□ 0.29
HLA-F-229ENST00000489502 CASTP20810 708 aaKnown RBP16.87■□□□□ 0.29
HLA-F-229ENST00000489502 SLC16A2P36021 539 aa16.87■□□□□ 0.29
HLA-F-229ENST00000489502 PSMC4P43686 418 aa16.87■□□□□ 0.29
HLA-F-229ENST00000489502 PLS1Q14651 629 aa16.87■□□□□ 0.29
HLA-F-229ENST00000489502 KIF22Q14807 665 aa16.87■□□□□ 0.29
HLA-F-229ENST00000489502 Q3C1V9 767 aa16.87■□□□□ 0.29
HLA-F-229ENST00000489502 RAB11FIP4Q86YS3 637 aa16.87■□□□□ 0.29
HLA-F-229ENST00000489502 GPRC5AQ8NFJ5 357 aa16.87■□□□□ 0.29
HLA-F-229ENST00000489502 TMEM87BQ96K49 555 aa16.87■□□□□ 0.29
HLA-F-229ENST00000489502 MYL10Q9BUA6 226 aa16.87■□□□□ 0.29
HLA-F-229ENST00000489502 CPVLQ9H3G5 476 aa16.87■□□□□ 0.29
HLA-F-229ENST00000489502 HOXC10Q9NYD6 342 aa16.87■□□□□ 0.29
HLA-F-229ENST00000489502 TRIM17Q9Y577 477 aa16.87■□□□□ 0.29
HLA-F-229ENST00000489502 PLXNB2O15031 1838 aa16.86■□□□□ 0.29
HLA-F-229ENST00000489502 FCGRTP55899 365 aa16.86■□□□□ 0.29
HLA-F-229ENST00000489502 SNAP25P60880 206 aa16.86■□□□□ 0.29
HLA-F-229ENST00000489502 EXOSC10Q01780 885 aaKnown RBP16.86■□□□□ 0.29
HLA-F-229ENST00000489502 TMEM132BQ14DG7 1078 aa16.86■□□□□ 0.29
HLA-F-229ENST00000489502 BLOC1S2Q6QNY1 142 aa16.86■□□□□ 0.29
HLA-F-229ENST00000489502 NFXL1Q6ZNB6 911 aa16.86■□□□□ 0.29
HLA-F-229ENST00000489502 DHX32Q7L7V1 743 aaKnown RBP16.86■□□□□ 0.29
HLA-F-229ENST00000489502 OTOP1Q7RTM1 612 aa16.86■□□□□ 0.29
HLA-F-229ENST00000489502 CTU1Q7Z7A3 348 aaKnown RBP16.86■□□□□ 0.29
HLA-F-229ENST00000489502 FAM160B2Q86V87 743 aa16.86■□□□□ 0.29
HLA-F-229ENST00000489502 PRPF38AQ8NAV1 312 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms