RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 GOLGA8BA8MQT2 603 aa16.62■□□□□ 0.25
CLDN11-209ENST00000489485 LARGE1O95461 756 aa16.62■□□□□ 0.25
CLDN11-209ENST00000489485 BMP3P12645 472 aa16.62■□□□□ 0.25
CLDN11-209ENST00000489485 STK3Q13188 491 aa16.62■□□□□ 0.25
CLDN11-209ENST00000489485 NOGQ13253 232 aa16.62■□□□□ 0.25
CLDN11-209ENST00000489485 FAM83BQ5T0W9 1011 aa16.62■□□□□ 0.25
CLDN11-209ENST00000489485 KCTD1Q719H9 257 aa16.62■□□□□ 0.25
CLDN11-209ENST00000489485 PROCA1Q8NCQ7 364 aaPredicted RBP16.62■□□□□ 0.25
CLDN11-209ENST00000489485 TMX3Q96JJ7 454 aa16.62■□□□□ 0.25
CLDN11-209ENST00000489485 C12orf42Q96LP6 360 aa16.62■□□□□ 0.25
CLDN11-209ENST00000489485 FRMPD2Q68DX3 1309 aaPredicted RBP16.61■□□□□ 0.25
CLDN11-209ENST00000489485 MANSC4A6NHS7 340 aaPredicted RBP16.61■□□□□ 0.25
CLDN11-209ENST00000489485 DDAH1O94760 285 aa16.61■□□□□ 0.25
CLDN11-209ENST00000489485 GOLGA8HP0CJ92 632 aa16.61■□□□□ 0.25
CLDN11-209ENST00000489485 CALM1P0DP23 149 aa16.61■□□□□ 0.25
CLDN11-209ENST00000489485 CALM2P0DP24 149 aa16.61■□□□□ 0.25
CLDN11-209ENST00000489485 CALM3P0DP25 149 aa16.61■□□□□ 0.25
CLDN11-209ENST00000489485 TREML2Q5T2D2 321 aa16.61■□□□□ 0.25
CLDN11-209ENST00000489485 CTCFLQ8NI51 663 aaPredicted RBP16.61■□□□□ 0.25
CLDN11-209ENST00000489485 GMCL1Q96IK5 515 aa16.61■□□□□ 0.25
CLDN11-209ENST00000489485 TANGO6Q9C0B7 1094 aa16.61■□□□□ 0.25
CLDN11-209ENST00000489485 RPAP3Q9H6T3 665 aaPredicted RBP16.61■□□□□ 0.25
CLDN11-209ENST00000489485 LOC285556D6RIA3 1793 aa16.61■□□□□ 0.25
CLDN11-209ENST00000489485 WDR33Q9C0J8 1336 aaKnown RBP16.61■□□□□ 0.25
CLDN11-209ENST00000489485 WDR46O15213 610 aaKnown RBP16.61■□□□□ 0.25
CLDN11-209ENST00000489485 AOC2O75106 756 aa16.61■□□□□ 0.25
CLDN11-209ENST00000489485 PARP1P09874 1014 aaKnown RBP16.61■□□□□ 0.25
CLDN11-209ENST00000489485 PDIA3P30101 505 aaKnown RBP16.61■□□□□ 0.25
CLDN11-209ENST00000489485 EVCP57679 992 aa16.61■□□□□ 0.25
CLDN11-209ENST00000489485 FANCBQ8NB91 859 aa16.61■□□□□ 0.25
CLDN11-209ENST00000489485 DCAF4Q8WV16 495 aa16.61■□□□□ 0.25
CLDN11-209ENST00000489485 BRI3BPQ8WY22 251 aa16.61■□□□□ 0.25
CLDN11-209ENST00000489485 ZIC5Q96T25 663 aa16.61■□□□□ 0.25
CLDN11-209ENST00000489485 GPCPD1Q9NPB8 672 aa16.61■□□□□ 0.25
CLDN11-209ENST00000489485 SNHG28P0DPA3 235 aa16.6■□□□□ 0.25
CLDN11-209ENST00000489485 VEGFBP49765 207 aa16.6■□□□□ 0.25
CLDN11-209ENST00000489485 METAP2P50579 478 aaKnown RBP eCLIP16.6■□□□□ 0.25
CLDN11-209ENST00000489485 CCT2P78371 535 aaKnown RBP16.6■□□□□ 0.25
CLDN11-209ENST00000489485 KIF23Q02241 960 aaPredicted RBP16.6■□□□□ 0.25
CLDN11-209ENST00000489485 IKQ13123 557 aaPredicted RBP16.6■□□□□ 0.25
CLDN11-209ENST00000489485 MOGSQ13724 837 aa16.6■□□□□ 0.25
CLDN11-209ENST00000489485 SAMD1Q6SPF0 538 aaPredicted RBP16.6■□□□□ 0.25
CLDN11-209ENST00000489485 NECAB1Q8N987 351 aa16.6■□□□□ 0.25
CLDN11-209ENST00000489485 ZNF274Q96GC6 653 aaPredicted RBP16.6■□□□□ 0.25
CLDN11-209ENST00000489485 AGTPBP1Q9UPW5 1226 aa16.6■□□□□ 0.25
CLDN11-209ENST00000489485 CEP350Q5VT06 3117 aa16.59■□□□□ 0.25
CLDN11-209ENST00000489485 GOLGA8AA7E2F4 631 aa16.59■□□□□ 0.25
CLDN11-209ENST00000489485 TMEM232C9JQI7 657 aa16.59■□□□□ 0.25
CLDN11-209ENST00000489485 INHBEP58166 350 aa16.59■□□□□ 0.25
CLDN11-209ENST00000489485 ZNF543Q08ER8 600 aa16.59■□□□□ 0.25
CLDN11-209ENST00000489485 SREBF2Q12772 1141 aa16.59■□□□□ 0.25
CLDN11-209ENST00000489485 SPRYD3Q8NCJ5 442 aa16.59■□□□□ 0.25
CLDN11-209ENST00000489485 ZSCAN31Q96LW9 406 aaPredicted RBP16.59■□□□□ 0.25
CLDN11-209ENST00000489485 IPO9Q96P70 1041 aaKnown RBP16.59■□□□□ 0.25
CLDN11-209ENST00000489485 BTBD19C9JJ37 291 aa16.59■□□□□ 0.25
CLDN11-209ENST00000489485 KIF5BP33176 963 aa16.59■□□□□ 0.25
CLDN11-209ENST00000489485 GRM4Q14833 912 aa16.59■□□□□ 0.25
CLDN11-209ENST00000489485 ASPRV1Q53RT3 343 aa16.59■□□□□ 0.25
CLDN11-209ENST00000489485 GPATCH4Q5T3I0 446 aaKnown RBP16.59■□□□□ 0.25
CLDN11-209ENST00000489485 STAG2Q8N3U4 1231 aa16.59■□□□□ 0.25
CLDN11-209ENST00000489485 MAP3K14Q99558 947 aa16.59■□□□□ 0.25
CLDN11-209ENST00000489485 PTPN18Q99952 460 aa16.59■□□□□ 0.25
CLDN11-209ENST00000489485 SLKQ9H2G2 1235 aaPredicted RBP16.59■□□□□ 0.25
CLDN11-209ENST00000489485 SH2B1Q9NRF2 756 aaPredicted RBP16.59■□□□□ 0.25
CLDN11-209ENST00000489485 MAD2L2Q9UI95 211 aa16.59■□□□□ 0.25
CLDN11-209ENST00000489485 HPS5Q9UPZ3 1129 aa16.59■□□□□ 0.25
CLDN11-209ENST00000489485 BAZ2BQ9UIF8 2168 aaKnown RBP16.58■□□□□ 0.24
CLDN11-209ENST00000489485 USP17L15C9J2P7 530 aa16.58■□□□□ 0.24
CLDN11-209ENST00000489485 USP17L13C9JLJ4 530 aa16.58■□□□□ 0.24
CLDN11-209ENST00000489485 USP17L11C9JVI0 530 aa16.58■□□□□ 0.24
CLDN11-209ENST00000489485 USP17L18D6R9N7 530 aa16.58■□□□□ 0.24
CLDN11-209ENST00000489485 USP17L22D6RA61 530 aa16.58■□□□□ 0.24
CLDN11-209ENST00000489485 USP17L17D6RBQ6 530 aa16.58■□□□□ 0.24
CLDN11-209ENST00000489485 USP17L19D6RCP7 530 aa16.58■□□□□ 0.24
CLDN11-209ENST00000489485 USP17L20D6RJB6 530 aa16.58■□□□□ 0.24
CLDN11-209ENST00000489485 FLOT1O75955 427 aa16.58■□□□□ 0.24
CLDN11-209ENST00000489485 STAT2P52630 851 aa16.58■□□□□ 0.24
CLDN11-209ENST00000489485 RCAN1P53805 252 aa16.58■□□□□ 0.24
CLDN11-209ENST00000489485 USP17L24Q0WX57 530 aa16.58■□□□□ 0.24
CLDN11-209ENST00000489485 PABPC4Q13310 644 aaKnown RBP eCLIP16.58■□□□□ 0.24
CLDN11-209ENST00000489485 RTN1Q16799 776 aa16.58■□□□□ 0.24
CLDN11-209ENST00000489485 TTBK2Q6IQ55 1244 aa16.58■□□□□ 0.24
CLDN11-209ENST00000489485 GPAT2Q6NUI2 795 aa16.58■□□□□ 0.24
CLDN11-209ENST00000489485 FBXO28Q9NVF7 368 aa16.58■□□□□ 0.24
CLDN11-209ENST00000489485 TESPA1A2RU30 521 aaPredicted RBP16.57■□□□□ 0.24
CLDN11-209ENST00000489485 PALM3A6NDB9 673 aaPredicted RBP16.57■□□□□ 0.24
CLDN11-209ENST00000489485 KLRF2D3W0D1 207 aa16.57■□□□□ 0.24
CLDN11-209ENST00000489485 PDHXO00330 501 aa16.57■□□□□ 0.24
CLDN11-209ENST00000489485 HSP90AA1P07900 732 aaKnown RBP16.57■□□□□ 0.24
CLDN11-209ENST00000489485 SLC16A2P36021 539 aa16.57■□□□□ 0.24
CLDN11-209ENST00000489485 IRX3P78415 501 aaPredicted RBP16.57■□□□□ 0.24
CLDN11-209ENST00000489485 SCRN1Q12765 414 aa16.57■□□□□ 0.24
CLDN11-209ENST00000489485 CATSPERGQ6ZRH7 1159 aa16.57■□□□□ 0.24
CLDN11-209ENST00000489485 CCDC83Q8IWF9 413 aa16.57■□□□□ 0.24
CLDN11-209ENST00000489485 CMTR1Q8N1G2 835 aaKnown RBP16.57■□□□□ 0.24
CLDN11-209ENST00000489485 FAM43AQ8N2R8 423 aa16.57■□□□□ 0.24
CLDN11-209ENST00000489485 UBA5Q9GZZ9 404 aa16.57■□□□□ 0.24
CLDN11-209ENST00000489485 CPVLQ9H3G5 476 aa16.57■□□□□ 0.24
CLDN11-209ENST00000489485 NCOA5Q9HCD5 579 aaKnown RBP16.57■□□□□ 0.24
CLDN11-209ENST00000489485 CCDC196A0A1B0GTZ2 297 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms