RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 PORCNQ9H237 461 aa18.6■□□□□ 0.57
LMX1A-204ENST00000489443 CWC22Q9HCG8 908 aaKnown RBP18.6■□□□□ 0.57
LMX1A-204ENST00000489443 ISY1Q9ULR0 285 aaKnown RBP18.6■□□□□ 0.57
LMX1A-204ENST00000489443 MAPK4P31152 587 aa18.59■□□□□ 0.57
LMX1A-204ENST00000489443 WDR78Q5VTH9 848 aa18.59■□□□□ 0.57
LMX1A-204ENST00000489443 GMCL1P1Q8NEA9 526 aa18.59■□□□□ 0.57
LMX1A-204ENST00000489443 NKX2-3Q8TAU0 364 aa18.59■□□□□ 0.57
LMX1A-204ENST00000489443 ESR2Q92731 530 aa18.59■□□□□ 0.57
LMX1A-204ENST00000489443 SYNPO2Q9UMS6 1093 aa18.59■□□□□ 0.57
LMX1A-204ENST00000489443 MTMR7Q9Y216 660 aa18.59■□□□□ 0.57
LMX1A-204ENST00000489443 PARP14Q460N5 1801 aa18.58■□□□□ 0.57
LMX1A-204ENST00000489443 MYCP01106 439 aaPredicted RBP18.58■□□□□ 0.56
LMX1A-204ENST00000489443 GRK4P32298 578 aa18.58■□□□□ 0.56
LMX1A-204ENST00000489443 SOX10P56693 466 aa18.58■□□□□ 0.56
LMX1A-204ENST00000489443 PLS1Q14651 629 aa18.58■□□□□ 0.56
LMX1A-204ENST00000489443 KIAA1211Q6ZU35 1233 aa18.58■□□□□ 0.56
LMX1A-204ENST00000489443 MB21D1Q8N884 522 aa18.58■□□□□ 0.56
LMX1A-204ENST00000489443 ARMC5Q96C12 935 aa18.58■□□□□ 0.56
LMX1A-204ENST00000489443 ESYT1Q9BSJ8 1104 aa18.58■□□□□ 0.56
LMX1A-204ENST00000489443 BIN2Q9UBW5 565 aaPredicted RBP18.58■□□□□ 0.56
LMX1A-204ENST00000489443 U3KPZ7 1027 aaPredicted RBP18.58■□□□□ 0.56
LMX1A-204ENST00000489443 KIAA0100Q14667 2235 aaKnown RBP18.57■□□□□ 0.56
LMX1A-204ENST00000489443 B4E1Z4 1266 aa18.57■□□□□ 0.56
LMX1A-204ENST00000489443 ADCY3O60266 1144 aa18.57■□□□□ 0.56
LMX1A-204ENST00000489443 KDM4AO75164 1064 aa18.57■□□□□ 0.56
LMX1A-204ENST00000489443 MCCP23508 829 aa18.57■□□□□ 0.56
LMX1A-204ENST00000489443 PLEKHH3Q7Z736 793 aa18.57■□□□□ 0.56
LMX1A-204ENST00000489443 SLF1Q9BQI6 1058 aa18.57■□□□□ 0.56
LMX1A-204ENST00000489443 ZKSCAN3Q9BRR0 538 aa18.57■□□□□ 0.56
LMX1A-204ENST00000489443 TCP11L1Q9NUJ3 509 aa18.57■□□□□ 0.56
LMX1A-204ENST00000489443 GJD2Q9UKL4 321 aa18.57■□□□□ 0.56
LMX1A-204ENST00000489443 PPP1R9AQ9ULJ8 1098 aa18.57■□□□□ 0.56
LMX1A-204ENST00000489443 COL11A1P12107 1806 aaPredicted RBP18.56■□□□□ 0.56
LMX1A-204ENST00000489443 BMP3P12645 472 aa18.56■□□□□ 0.56
LMX1A-204ENST00000489443 ELNP15502 786 aa18.56■□□□□ 0.56
LMX1A-204ENST00000489443 GPR142Q7Z601 462 aa18.56■□□□□ 0.56
LMX1A-204ENST00000489443 MAP4K1Q92918 833 aa18.56■□□□□ 0.56
LMX1A-204ENST00000489443 ZNF333Q96JL9 665 aa18.56■□□□□ 0.56
LMX1A-204ENST00000489443 TMEM47Q9BQJ4 181 aa18.56■□□□□ 0.56
LMX1A-204ENST00000489443 MOV10L1Q9BXT6 1211 aaKnown RBP18.56■□□□□ 0.56
LMX1A-204ENST00000489443 SPATC1LQ9H0A9 340 aa18.56■□□□□ 0.56
LMX1A-204ENST00000489443 CNNM2Q9H8M5 875 aa18.56■□□□□ 0.56
LMX1A-204ENST00000489443 ADAMTS5Q9UNA0 930 aa18.56■□□□□ 0.56
LMX1A-204ENST00000489443 VWA5AO00534 786 aa18.55■□□□□ 0.56
LMX1A-204ENST00000489443 CYP21A2P08686 494 aa18.55■□□□□ 0.56
LMX1A-204ENST00000489443 TOP1P11387 765 aaKnown RBP18.55■□□□□ 0.56
LMX1A-204ENST00000489443 SLC1A4P43007 532 aa18.55■□□□□ 0.56
LMX1A-204ENST00000489443 NOVP48745 357 aa18.55■□□□□ 0.56
LMX1A-204ENST00000489443 IRF5Q13568 498 aa18.55■□□□□ 0.56
LMX1A-204ENST00000489443 TMEM132BQ14DG7 1078 aa18.55■□□□□ 0.56
LMX1A-204ENST00000489443 PRPF38AQ8NAV1 312 aaKnown RBP18.55■□□□□ 0.56
LMX1A-204ENST00000489443 SLAIN1Q8ND83 568 aa18.55■□□□□ 0.56
LMX1A-204ENST00000489443 KIFC2Q96AC6 838 aa18.55■□□□□ 0.56
LMX1A-204ENST00000489443 NUDT12Q9BQG2 462 aa18.55■□□□□ 0.56
LMX1A-204ENST00000489443 KRT23Q9C075 422 aa18.55■□□□□ 0.56
LMX1A-204ENST00000489443 FEM1BQ9UK73 627 aa18.55■□□□□ 0.56
LMX1A-204ENST00000489443 A0A0G2JMZ2 1700 aa18.54■□□□□ 0.56
LMX1A-204ENST00000489443 PLXNB2O15031 1838 aa18.54■□□□□ 0.56
LMX1A-204ENST00000489443 TMEM232C9JQI7 657 aa18.54■□□□□ 0.56
LMX1A-204ENST00000489443 CDC45O75419 566 aa18.54■□□□□ 0.56
LMX1A-204ENST00000489443 CYP2B6P20813 491 aa18.54■□□□□ 0.56
LMX1A-204ENST00000489443 IKQ13123 557 aaPredicted RBP18.54■□□□□ 0.56
LMX1A-204ENST00000489443 RCSD1Q6JBY9 416 aa18.54■□□□□ 0.56
LMX1A-204ENST00000489443 CASC1Q6TDU7 716 aa18.54■□□□□ 0.56
LMX1A-204ENST00000489443 IQCA1Q86XH1 822 aa18.54■□□□□ 0.56
LMX1A-204ENST00000489443 GMCL1Q96IK5 515 aa18.54■□□□□ 0.56
LMX1A-204ENST00000489443 TTC14Q96N46 770 aa18.54■□□□□ 0.56
LMX1A-204ENST00000489443 ANO2Q9NQ90 1003 aa18.54■□□□□ 0.56
LMX1A-204ENST00000489443 ZSWIM5Q9P217 1185 aa18.54■□□□□ 0.56
LMX1A-204ENST00000489443 CTDP1Q9Y5B0 961 aaPredicted RBP18.54■□□□□ 0.56
LMX1A-204ENST00000489443 RBM8AQ9Y5S9 174 aaKnown RBP18.54■□□□□ 0.56
LMX1A-204ENST00000489443 IVNS1ABPQ9Y6Y0 642 aa18.54■□□□□ 0.56
LMX1A-204ENST00000489443 ERCC3P19447 782 aa18.53■□□□□ 0.56
LMX1A-204ENST00000489443 NT5C2P49902 561 aa18.53■□□□□ 0.56
LMX1A-204ENST00000489443 TRDNQ13061 729 aa18.53■□□□□ 0.56
LMX1A-204ENST00000489443 KCTD1Q719H9 257 aa18.53■□□□□ 0.56
LMX1A-204ENST00000489443 RASGRP2Q7LDG7 609 aa18.53■□□□□ 0.56
LMX1A-204ENST00000489443 NCAPG2Q86XI2 1143 aa18.53■□□□□ 0.56
LMX1A-204ENST00000489443 PXYLP1Q8TE99 480 aa18.53■□□□□ 0.56
LMX1A-204ENST00000489443 CHURC1Q8WUH1 139 aa18.53■□□□□ 0.56
LMX1A-204ENST00000489443 SOCS4Q8WXH5 440 aa18.53■□□□□ 0.56
LMX1A-204ENST00000489443 TMEM106CQ9BVX2 250 aa18.53■□□□□ 0.56
LMX1A-204ENST00000489443 LSG1Q9H089 658 aaKnown RBP18.53■□□□□ 0.56
LMX1A-204ENST00000489443 TAF6LQ9Y6J9 622 aa18.53■□□□□ 0.56
LMX1A-204ENST00000489443 ZBED4O75132 1171 aa18.52■□□□□ 0.56
LMX1A-204ENST00000489443 PTPREP23469 700 aa18.52■□□□□ 0.56
LMX1A-204ENST00000489443 STAT3P40763 770 aa18.52■□□□□ 0.56
LMX1A-204ENST00000489443 STAT2P52630 851 aa18.52■□□□□ 0.56
LMX1A-204ENST00000489443 CCDC96Q2M329 555 aa18.52■□□□□ 0.56
LMX1A-204ENST00000489443 CCDC178Q5BJE1 867 aa18.52■□□□□ 0.56
LMX1A-204ENST00000489443 MORN1Q5T089 497 aa18.52■□□□□ 0.56
LMX1A-204ENST00000489443 SHCBP1Q8NEM2 672 aa18.52■□□□□ 0.56
LMX1A-204ENST00000489443 DCAF4Q8WV16 495 aa18.52■□□□□ 0.56
LMX1A-204ENST00000489443 ZSCAN10Q96SZ4 725 aaPredicted RBP18.52■□□□□ 0.56
LMX1A-204ENST00000489443 UBAC1Q9BSL1 405 aa18.52■□□□□ 0.56
LMX1A-204ENST00000489443 SLC15A5A6NIM6 579 aa18.51■□□□□ 0.55
LMX1A-204ENST00000489443 E7EWF7 191 aa18.51■□□□□ 0.55
LMX1A-204ENST00000489443 RGS2P41220 211 aa18.51■□□□□ 0.55
LMX1A-204ENST00000489443 SLC4A3P48751 1232 aa18.51■□□□□ 0.55
LMX1A-204ENST00000489443 UBXN2AP68543 259 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms